RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 CD4P01730 458 aa24.67■■□□□ 1.54
LRP3-202ENST00000590275 RPS6KB1P23443 525 aa24.67■■□□□ 1.54
LRP3-202ENST00000590275 ITGA7Q13683 1181 aa24.67■■□□□ 1.54
LRP3-202ENST00000590275 TTLL4Q14679 1199 aa24.67■■□□□ 1.54
LRP3-202ENST00000590275 SAMD3Q8N6K7 520 aa24.67■■□□□ 1.54
LRP3-202ENST00000590275 BRF1Q92994 677 aa24.67■■□□□ 1.54
LRP3-202ENST00000590275 AGXT2Q9BYV1 514 aa24.67■■□□□ 1.54
LRP3-202ENST00000590275 TMEM39AQ9NV64 488 aa24.67■■□□□ 1.54
LRP3-202ENST00000590275 B4DLN1 442 aa24.66■■□□□ 1.54
LRP3-202ENST00000590275 NKRFO15226 690 aaKnown RBP eCLIP24.66■■□□□ 1.54
LRP3-202ENST00000590275 MYL3P08590 195 aa24.66■■□□□ 1.54
LRP3-202ENST00000590275 HMGB1P09429 215 aaKnown RBP24.66■■□□□ 1.54
LRP3-202ENST00000590275 ADD1P35611 737 aaKnown RBP24.66■■□□□ 1.54
LRP3-202ENST00000590275 MRPL12P52815 198 aaKnown RBP24.66■■□□□ 1.54
LRP3-202ENST00000590275 SP2Q02086 613 aa24.66■■□□□ 1.54
LRP3-202ENST00000590275 RTN1Q16799 776 aa24.66■■□□□ 1.54
LRP3-202ENST00000590275 BLOC1S2Q6QNY1 142 aa24.66■■□□□ 1.54
LRP3-202ENST00000590275 TDHQ8IZJ6 230 aa24.66■■□□□ 1.54
LRP3-202ENST00000590275 AFG1LQ8WV93 481 aa24.66■■□□□ 1.54
LRP3-202ENST00000590275 GOLGA8AA7E2F4 631 aa24.65■■□□□ 1.54
LRP3-202ENST00000590275 GOLGA8BA8MQT2 603 aa24.65■■□□□ 1.54
LRP3-202ENST00000590275 UBE2SQ16763 222 aa24.65■■□□□ 1.54
LRP3-202ENST00000590275 C9orf50Q5SZB4 431 aa24.65■■□□□ 1.54
LRP3-202ENST00000590275 WWC2Q6AWC2 1192 aa24.65■■□□□ 1.54
LRP3-202ENST00000590275 LBHD1Q9BQE6 289 aaPredicted RBP24.65■■□□□ 1.54
LRP3-202ENST00000590275 TRPV6Q9H1D0 765 aa24.65■■□□□ 1.54
LRP3-202ENST00000590275 PRKAG2Q9UGJ0 569 aa24.65■■□□□ 1.54
LRP3-202ENST00000590275 SEC63Q9UGP8 760 aaKnown RBP24.65■■□□□ 1.54
LRP3-202ENST00000590275 DCDC2CA8MYV0 355 aa24.64■■□□□ 1.54
LRP3-202ENST00000590275 RBAK-RBAKDNI3L0D1 243 aa24.64■■□□□ 1.54
LRP3-202ENST00000590275 PIK3CDO00329 1044 aa24.64■■□□□ 1.54
LRP3-202ENST00000590275 SORBS3O60504 671 aa24.64■■□□□ 1.54
LRP3-202ENST00000590275 CABYRO75952 493 aa24.64■■□□□ 1.54
LRP3-202ENST00000590275 CASTP20810 708 aaKnown RBP24.64■■□□□ 1.54
LRP3-202ENST00000590275 TRAF1Q13077 416 aa24.64■■□□□ 1.54
LRP3-202ENST00000590275 SEMA3FQ13275 785 aa24.64■■□□□ 1.54
LRP3-202ENST00000590275 SYNE3Q6ZMZ3 975 aa24.64■■□□□ 1.54
LRP3-202ENST00000590275 FBXL16Q8N461 479 aa24.64■■□□□ 1.54
LRP3-202ENST00000590275 UMODL1Q5DID0 1318 aa24.63■■□□□ 1.53
LRP3-202ENST00000590275 ADAMTS3O15072 1205 aa24.63■■□□□ 1.53
LRP3-202ENST00000590275 ZEB2O60315 1214 aa24.63■■□□□ 1.53
LRP3-202ENST00000590275 B4GALT4O60513 344 aa24.63■■□□□ 1.53
LRP3-202ENST00000590275 CPT1AP50416 773 aa24.63■■□□□ 1.53
LRP3-202ENST00000590275 TOB2Q14106 344 aaPredicted RBP24.63■■□□□ 1.53
LRP3-202ENST00000590275 SHHQ15465 462 aa24.63■■□□□ 1.53
LRP3-202ENST00000590275 ZSWIM6Q9HCJ5 1215 aa24.63■■□□□ 1.53
LRP3-202ENST00000590275 RBM28Q9NW13 759 aaKnown RBP24.63■■□□□ 1.53
LRP3-202ENST00000590275 TELO2Q9Y4R8 837 aa24.63■■□□□ 1.53
LRP3-202ENST00000590275 MRVI1Q9Y6F6 885 aa24.63■■□□□ 1.53
LRP3-202ENST00000590275 V9GY48 417 aaPredicted RBP24.63■■□□□ 1.53
LRP3-202ENST00000590275 EPB41L2O43491 1005 aaKnown RBP24.62■■□□□ 1.53
LRP3-202ENST00000590275 GH1P01241 217 aa24.62■■□□□ 1.53
LRP3-202ENST00000590275 MMP3P08254 477 aa24.62■■□□□ 1.53
LRP3-202ENST00000590275 HEATR3Q7Z4Q2 680 aa24.62■■□□□ 1.53
LRP3-202ENST00000590275 KAT2BQ92831 832 aa24.62■■□□□ 1.53
LRP3-202ENST00000590275 LARP6Q9BRS8 491 aaKnown RBP24.62■■□□□ 1.53
LRP3-202ENST00000590275 POLR3EQ9NVU0 708 aa24.62■■□□□ 1.53
LRP3-202ENST00000590275 RTEL1Q9NZ71 1219 aa24.62■■□□□ 1.53
LRP3-202ENST00000590275 RAG1P15918 1043 aa24.61■■□□□ 1.53
LRP3-202ENST00000590275 CCND2P30279 289 aa24.61■■□□□ 1.53
LRP3-202ENST00000590275 NBPF20Q3BBV1 942 aa24.61■■□□□ 1.53
LRP3-202ENST00000590275 MTG1Q9BT17 334 aaPredicted RBP24.61■■□□□ 1.53
LRP3-202ENST00000590275 ALDH8A1Q9H2A2 487 aaPredicted RBP24.61■■□□□ 1.53
LRP3-202ENST00000590275 PSTPIP2Q9H939 334 aa24.61■■□□□ 1.53
LRP3-202ENST00000590275 TRMT13Q9NUP7 481 aaKnown RBP24.61■■□□□ 1.53
LRP3-202ENST00000590275 NAP1L2Q9ULW6 460 aaPredicted RBP24.61■■□□□ 1.53
LRP3-202ENST00000590275 NID2Q14112 1375 aa24.61■■□□□ 1.53
LRP3-202ENST00000590275 STXBP3O00186 592 aa24.6■■□□□ 1.53
LRP3-202ENST00000590275 PPFIA3O75145 1194 aa24.6■■□□□ 1.53
LRP3-202ENST00000590275 TIMP1P01033 207 aa24.6■■□□□ 1.53
LRP3-202ENST00000590275 UBA1P22314 1058 aaKnown RBP24.6■■□□□ 1.53
LRP3-202ENST00000590275 RCAN1P53805 252 aa24.6■■□□□ 1.53
LRP3-202ENST00000590275 LRIT3Q3SXY7 679 aa24.6■■□□□ 1.53
LRP3-202ENST00000590275 RUFY3Q7L099 469 aa24.6■■□□□ 1.53
LRP3-202ENST00000590275 C16orf59Q7L2K0 433 aa24.6■■□□□ 1.53
LRP3-202ENST00000590275 SMARCC2Q8TAQ2 1214 aa24.6■■□□□ 1.53
LRP3-202ENST00000590275 EMID1Q96A84 441 aaPredicted RBP24.6■■□□□ 1.53
LRP3-202ENST00000590275 INPP4AQ96PE3 977 aaPredicted RBP24.6■■□□□ 1.53
LRP3-202ENST00000590275 UPF3BQ9BZI7 483 aaKnown RBP24.6■■□□□ 1.53
LRP3-202ENST00000590275 PPP1R12CQ9BZL4 782 aa24.6■■□□□ 1.53
LRP3-202ENST00000590275 MROH7Q68CQ1 1323 aa24.6■■□□□ 1.53
LRP3-202ENST00000590275 METAP2P50579 478 aaKnown RBP eCLIP24.59■■□□□ 1.53
LRP3-202ENST00000590275 EVCP57679 992 aa24.59■■□□□ 1.53
LRP3-202ENST00000590275 NTRK3Q16288 839 aa24.59■■□□□ 1.53
LRP3-202ENST00000590275 HSDL1Q3SXM5 330 aa24.59■■□□□ 1.53
LRP3-202ENST00000590275 MYSM1Q5VVJ2 828 aa24.59■■□□□ 1.53
LRP3-202ENST00000590275 VWCEQ96DN2 955 aa24.59■■□□□ 1.53
LRP3-202ENST00000590275 KIAA1217Q5T5P2 1943 aa24.59■■□□□ 1.53
LRP3-202ENST00000590275 SEC24BO95487 1268 aa24.58■■□□□ 1.53
LRP3-202ENST00000590275 PSMA5P28066 241 aa24.58■■□□□ 1.53
LRP3-202ENST00000590275 PDIA3P30101 505 aaKnown RBP24.58■■□□□ 1.53
LRP3-202ENST00000590275 CYP2C18P33260 490 aa24.58■■□□□ 1.53
LRP3-202ENST00000590275 FGD1P98174 961 aa24.58■■□□□ 1.53
LRP3-202ENST00000590275 PKN1Q16512 942 aa24.58■■□□□ 1.53
LRP3-202ENST00000590275 CELF3Q5SZQ8 465 aaKnown RBP24.58■■□□□ 1.53
LRP3-202ENST00000590275 CTAGE1Q96RT6 745 aa24.58■■□□□ 1.53
LRP3-202ENST00000590275 NCOA5Q9HCD5 579 aaKnown RBP24.58■■□□□ 1.53
LRP3-202ENST00000590275 SPATA31C2B4DYI2 1134 aa24.57■■□□□ 1.52
LRP3-202ENST00000590275 GGPS1O95749 300 aa24.57■■□□□ 1.52
LRP3-202ENST00000590275 CYP2C9P11712 490 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms