RNA–Protein interactions for RNA: ENST00000588831.5

LRFN3-204, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRFN3, Length 3,689 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-204ENST00000588831 MCM8Q9UJA3 840 aa13.43□□□□□ -0.26
LRFN3-204ENST00000588831 ZNF652Q9Y2D9 606 aa13.43□□□□□ -0.26
LRFN3-204ENST00000588831 KLHL33A6NCF5 533 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 FTCDO95954 541 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 HERVK_113P62684 666 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 STK4Q13043 487 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 CCDC6Q16204 474 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 RASIP1Q5U651 963 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 MAPKAPK5Q8IW41 473 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 MB21D1Q8N884 522 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 VGLL2Q8N8G2 317 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 CDK5RAP3Q96JB5 506 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 RNF26Q9BY78 433 aaPredicted RBP13.42□□□□□ -0.26
LRFN3-204ENST00000588831 TSGA10Q9BZW7 698 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 OPLAHO14841 1288 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 VIMP08670 466 aaKnown RBP13.42□□□□□ -0.26
LRFN3-204ENST00000588831 NNTQ13423 1086 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 ADAT2Q7Z6V5 191 aaKnown RBP13.42□□□□□ -0.26
LRFN3-204ENST00000588831 CACNA2D3Q8IZS8 1091 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 KLHL23Q8NBE8 558 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 CNOT6LQ96LI5 555 aaKnown RBP13.42□□□□□ -0.26
LRFN3-204ENST00000588831 MED1Q15648 1581 aaPredicted RBP13.42□□□□□ -0.26
LRFN3-204ENST00000588831 EIF3HO15372 352 aaKnown RBP eCLIP13.42□□□□□ -0.26
LRFN3-204ENST00000588831 NAPAP54920 295 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 IQCEQ6IPM2 695 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 PHF20Q9BVI0 1012 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 IFIH1Q9BYX4 1025 aaKnown RBP13.42□□□□□ -0.26
LRFN3-204ENST00000588831 CAPN6Q9Y6Q1 641 aa13.42□□□□□ -0.26
LRFN3-204ENST00000588831 EVI5O60447 810 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 KRT14P02533 472 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 ABCD1P33897 745 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 RPS6KA3P51812 740 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 PREPLQ4J6C6 727 aaPredicted RBP13.41□□□□□ -0.26
LRFN3-204ENST00000588831 CDKAL1Q5VV42 579 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 LONP2Q86WA8 852 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 TRIM31Q9BZY9 425 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 MAP2K7O14733 419 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 CETN3O15182 167 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 GTPBP6O43824 516 aaPredicted RBP13.41□□□□□ -0.26
LRFN3-204ENST00000588831 PLCG1P19174 1290 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 PAFAH1B1P43034 410 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 ACCSLQ4AC99 568 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 HOOK3Q86VS8 718 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 LMNTD2Q8IXW0 634 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 CELF1Q92879 486 aaKnown RBP13.41□□□□□ -0.26
LRFN3-204ENST00000588831 FERMT2Q96AC1 680 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 PAPOLBQ9NRJ5 636 aaKnown RBP13.41□□□□□ -0.26
LRFN3-204ENST00000588831 FRMPD2Q68DX3 1309 aaPredicted RBP13.41□□□□□ -0.26
LRFN3-204ENST00000588831 CYLC1P35663 651 aaPredicted RBP13.41□□□□□ -0.26
LRFN3-204ENST00000588831 GFPT1Q06210 699 aaPredicted RBP13.41□□□□□ -0.26
LRFN3-204ENST00000588831 ANKRD40Q6AI12 368 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 USP17L2Q6R6M4 530 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 BLIDQ8IZY5 108 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 GLIS3Q8NEA6 775 aa13.41□□□□□ -0.26
LRFN3-204ENST00000588831 SNRNP27Q8WVK2 155 aaKnown RBP13.41□□□□□ -0.26
LRFN3-204ENST00000588831 EPHB6O15197 1021 aa13.4□□□□□ -0.26
LRFN3-204ENST00000588831 TSPY3P0CV98 308 aa13.4□□□□□ -0.26
LRFN3-204ENST00000588831 TSPY8P0CW00 308 aa13.4□□□□□ -0.26
LRFN3-204ENST00000588831 TROAPQ12815 778 aa13.4□□□□□ -0.26
LRFN3-204ENST00000588831 ZNF658Q5TYW1 1059 aaPredicted RBP13.4□□□□□ -0.26
LRFN3-204ENST00000588831 TMEM260Q9NX78 707 aa13.4□□□□□ -0.26
LRFN3-204ENST00000588831 G3V3G9 751 aa13.4□□□□□ -0.26
LRFN3-204ENST00000588831 HDLBPQ00341 1268 aaKnown RBP13.4□□□□□ -0.26
LRFN3-204ENST00000588831 TRADDQ15628 312 aa13.4□□□□□ -0.26
LRFN3-204ENST00000588831 ERFEQ4G0M1 354 aa13.4□□□□□ -0.26
LRFN3-204ENST00000588831 DCAF8Q5TAQ9 597 aa13.4□□□□□ -0.26
LRFN3-204ENST00000588831 PNMA1Q8ND90 353 aa13.4□□□□□ -0.26
LRFN3-204ENST00000588831 TRIM58Q8NG06 486 aa13.4□□□□□ -0.26
LRFN3-204ENST00000588831 TGFBRAP1Q8WUH2 860 aa13.4□□□□□ -0.26
LRFN3-204ENST00000588831 NAA15Q9BXJ9 866 aaKnown RBP13.4□□□□□ -0.26
LRFN3-204ENST00000588831 TCP11L1Q9NUJ3 509 aa13.4□□□□□ -0.26
LRFN3-204ENST00000588831 ABCC6O95255 1503 aa13.4□□□□□ -0.26
LRFN3-204ENST00000588831 SLURP2P0DP57 97 aa13.4□□□□□ -0.27
LRFN3-204ENST00000588831 EIF4A3P38919 411 aaKnown RBP13.4□□□□□ -0.27
LRFN3-204ENST00000588831 MKRN4PQ13434 485 aaPredicted RBP13.4□□□□□ -0.27
LRFN3-204ENST00000588831 FAM47EQ6ZV65 393 aa13.4□□□□□ -0.27
LRFN3-204ENST00000588831 TMTC3Q6ZXV5 915 aa13.4□□□□□ -0.27
LRFN3-204ENST00000588831 CCDC43Q96MW1 224 aaKnown RBP13.4□□□□□ -0.27
LRFN3-204ENST00000588831 OSBPL1AQ9BXW6 950 aa13.4□□□□□ -0.27
LRFN3-204ENST00000588831 MYH2Q9UKX2 1941 aa13.39□□□□□ -0.27
LRFN3-204ENST00000588831 MROH5Q6ZUA9 1318 aa13.39□□□□□ -0.27
LRFN3-204ENST00000588831 RTL9Q8NET4 1388 aa13.39□□□□□ -0.27
LRFN3-204ENST00000588831 MYH13Q9UKX3 1938 aa13.39□□□□□ -0.27
LRFN3-204ENST00000588831 VAV2P52735 878 aa13.39□□□□□ -0.27
LRFN3-204ENST00000588831 USP14P54578 494 aa13.39□□□□□ -0.27
LRFN3-204ENST00000588831 SPAG1Q07617 926 aa13.39□□□□□ -0.27
LRFN3-204ENST00000588831 TXNRD1Q16881 649 aa13.39□□□□□ -0.27
LRFN3-204ENST00000588831 IRF2BP1Q8IU81 584 aa13.39□□□□□ -0.27
LRFN3-204ENST00000588831 WHAMMQ8TF30 809 aa13.39□□□□□ -0.27
LRFN3-204ENST00000588831 H0Y3Z8 333 aa13.39□□□□□ -0.27
LRFN3-204ENST00000588831 PECAM1P16284 738 aaPredicted RBP13.39□□□□□ -0.27
LRFN3-204ENST00000588831 MAGEA1P43355 309 aa13.39□□□□□ -0.27
LRFN3-204ENST00000588831 CTCFP49711 727 aaPredicted RBP13.39□□□□□ -0.27
LRFN3-204ENST00000588831 MECOMQ03112 1051 aa13.39□□□□□ -0.27
LRFN3-204ENST00000588831 SEC23AQ15436 765 aa13.39□□□□□ -0.27
LRFN3-204ENST00000588831 NAA35Q5VZE5 725 aa13.39□□□□□ -0.27
LRFN3-204ENST00000588831 WDR59Q6PJI9 974 aa13.39□□□□□ -0.27
LRFN3-204ENST00000588831 CABP7Q86V35 215 aa13.39□□□□□ -0.27
LRFN3-204ENST00000588831 ZNF444Q8N0Y2 327 aaPredicted RBP13.39□□□□□ -0.27
LRFN3-204ENST00000588831 ARL8AQ96BM9 186 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms