RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 FAM227BQ96M60 508 aa12.52□□□□□ -0.41
CSNK1D-226ENST00000585026 RMDN3Q96TC7 470 aa12.52□□□□□ -0.41
CSNK1D-226ENST00000585026 KAT14Q9H8E8 782 aa12.52□□□□□ -0.41
CSNK1D-226ENST00000585026 CCDC171Q6TFL3 1326 aa12.52□□□□□ -0.41
CSNK1D-226ENST00000585026 A0A0D9SFI3 127 aa12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 TRIM6-TRIM34B2RNG4 842 aa12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 ZNF213O14771 459 aa12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 DHX16O60231 1041 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 EIF3JO75822 258 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 ARIH2O95376 493 aa12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 GOLGA8HP0CJ92 632 aa12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 WDR5P61964 334 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 LAMC2Q13753 1193 aa12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 ASPRV1Q53RT3 343 aa12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 TMEM31Q5JXX7 168 aa12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 ARHGEF16Q5VV41 709 aa12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 GDF6Q6KF10 455 aaPredicted RBP12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 KCNV1Q6PIU1 500 aa12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 CHST3Q7LGC8 479 aa12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 PLEKHM2Q8IWE5 1019 aa12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 PNMA1Q8ND90 353 aa12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 SYTL5Q8TDW5 730 aaPredicted RBP12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 TGS1Q96RS0 853 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 RAD9AQ99638 391 aa12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 UBA5Q9GZZ9 404 aa12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 PRRC2BQ5JSZ5 2229 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-226ENST00000585026 SCN10AQ9Y5Y9 1956 aa12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 EPOPA6NHQ4 379 aa12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 CXCL10P02778 98 aa12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 ARHGAP1Q07960 439 aa12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 NMIQ13287 307 aaPredicted RBP12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 PTK7Q13308 1070 aa12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 LY6KQ17RY6 165 aa12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 FBXO11Q86XK2 927 aa12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 DHX37Q8IY37 1157 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 PPP1R13LQ8WUF5 828 aa12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 RILPL2Q969X0 211 aa12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 EMID1Q96A84 441 aaPredicted RBP12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 TAAR1Q96RJ0 339 aa12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 ALG1Q9BT22 464 aa12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 BACH2Q9BYV9 841 aa12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 GTF2IRD1Q9UHL9 959 aa12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 RAPGEFL1Q9UHV5 662 aa12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 MRVI1Q9Y6F6 885 aa12.5□□□□□ -0.41
CSNK1D-226ENST00000585026 EMSYQ7Z589 1322 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 GJB5O95377 273 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 NR3C2P08235 984 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 PARP1P09874 1014 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 CKBP12277 381 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 PSEN2P49810 448 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 ERVK-21P61565 698 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 TRAF1Q13077 416 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 MFSD10Q14728 455 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 BMP2KLQ5H9B9 411 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 KRT40Q6A162 431 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 ADGRF4Q8IZF3 695 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 SAMD3Q8N6K7 520 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 PPTC7Q8NI37 304 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 ANKS1AQ92625 1134 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 KAT2BQ92831 832 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 ZKSCAN3Q9BRR0 538 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 MAP3K20Q9NYL2 800 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 HDAC6Q9UBN7 1215 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 CTNNA3Q9UI47 895 aa12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 DDX41Q9UJV9 622 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-226ENST00000585026 LPXNO60711 386 aa12.48□□□□□ -0.41
CSNK1D-226ENST00000585026 KDM4AO75164 1064 aa12.48□□□□□ -0.41
CSNK1D-226ENST00000585026 PPFIA4O75335 1185 aa12.48□□□□□ -0.41
CSNK1D-226ENST00000585026 ARHGEF15O94989 841 aa12.48□□□□□ -0.41
CSNK1D-226ENST00000585026 AMHP03971 560 aa12.48□□□□□ -0.41
CSNK1D-226ENST00000585026 EIF2AK2P19525 551 aaKnown RBP12.48□□□□□ -0.41
CSNK1D-226ENST00000585026 KIAA0753Q2KHM9 967 aa12.48□□□□□ -0.41
CSNK1D-226ENST00000585026 ZNF589Q86UQ0 364 aaPredicted RBP12.48□□□□□ -0.41
CSNK1D-226ENST00000585026 TBC1D10CQ8IV04 446 aa12.48□□□□□ -0.41
CSNK1D-226ENST00000585026 TBC1D5Q92609 795 aa12.48□□□□□ -0.41
CSNK1D-226ENST00000585026 ZSCAN10Q96SZ4 725 aaPredicted RBP12.48□□□□□ -0.41
CSNK1D-226ENST00000585026 LRFN3Q9BTN0 628 aa12.48□□□□□ -0.41
CSNK1D-226ENST00000585026 AMNQ9BXJ7 453 aa12.48□□□□□ -0.41
CSNK1D-226ENST00000585026 EPHX3Q9H6B9 360 aa12.48□□□□□ -0.41
CSNK1D-226ENST00000585026 TSHZ2Q9NRE2 1034 aa12.48□□□□□ -0.41
CSNK1D-226ENST00000585026 INSL6Q9Y581 213 aa12.48□□□□□ -0.41
CSNK1D-226ENST00000585026 MUC3AQ02505 3323 aa12.48□□□□□ -0.41
CSNK1D-226ENST00000585026 GBF1Q92538 1859 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 LINC01553A4QN01 128 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 HIP1O00291 1037 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 GPR37L1O60883 481 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 NBNO60934 754 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 LGR5O75473 907 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 F2P00734 622 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 CFBP00751 764 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 DEFB103AP81534 67 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 QRICH1Q2TAL8 776 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 GDPD5Q8WTR4 605 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 DHX38Q92620 1227 aaKnown RBP12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 SAMD11Q96NU1 681 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 CTAGE1Q96RT6 745 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 UBAC1Q9BSL1 405 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 KRT23Q9C075 422 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 SUGCTQ9HAC7 445 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 VAT1LQ9HCJ6 419 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms