RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 PCSK9Q8NBP7 692 aaKnown RBP28.62■■■□□ 2.17
TTC39C-209ENST00000584250 OR6J1Q8NGC5 347 aa28.62■■■□□ 2.17
TTC39C-209ENST00000584250 STARD7Q9NQZ5 370 aa28.62■■■□□ 2.17
TTC39C-209ENST00000584250 CCDC196A0A1B0GTZ2 297 aa28.61■■■□□ 2.17
TTC39C-209ENST00000584250 NAPAP54920 295 aa28.61■■■□□ 2.17
TTC39C-209ENST00000584250 TTLL4Q14679 1199 aa28.61■■■□□ 2.17
TTC39C-209ENST00000584250 CUL5Q93034 780 aa28.61■■■□□ 2.17
TTC39C-209ENST00000584250 TLE2Q04725 743 aa28.6■■■□□ 2.17
TTC39C-209ENST00000584250 DDX41Q9UJV9 622 aaKnown RBP28.6■■■□□ 2.17
TTC39C-209ENST00000584250 COLQQ9Y215 455 aaPredicted RBP28.6■■■□□ 2.17
TTC39C-209ENST00000584250 SORBS3O60504 671 aa28.59■■■□□ 2.17
TTC39C-209ENST00000584250 CCND2P30279 289 aa28.59■■■□□ 2.17
TTC39C-209ENST00000584250 ARHGAP1Q07960 439 aa28.59■■■□□ 2.17
TTC39C-209ENST00000584250 PFKFB3Q16875 520 aaPredicted RBP28.59■■■□□ 2.17
TTC39C-209ENST00000584250 C1orf53Q5VUE5 145 aa28.59■■■□□ 2.17
TTC39C-209ENST00000584250 CHRDL2Q6WN34 429 aa28.59■■■□□ 2.17
TTC39C-209ENST00000584250 SH3RF1Q7Z6J0 888 aa28.59■■■□□ 2.17
TTC39C-209ENST00000584250 VTI1AQ96AJ9 217 aa28.59■■■□□ 2.17
TTC39C-209ENST00000584250 ZNF274Q96GC6 653 aaPredicted RBP28.59■■■□□ 2.17
TTC39C-209ENST00000584250 GLT1D1Q96MS3 346 aa28.59■■■□□ 2.17
TTC39C-209ENST00000584250 BARHL2Q9NY43 387 aa28.59■■■□□ 2.17
TTC39C-209ENST00000584250 RTEL1Q9NZ71 1219 aa28.59■■■□□ 2.17
TTC39C-209ENST00000584250 TPCN1Q9ULQ1 816 aa28.59■■■□□ 2.17
TTC39C-209ENST00000584250 PRPF3O43395 683 aaKnown RBP28.58■■■□□ 2.17
TTC39C-209ENST00000584250 SCG2P13521 617 aa28.58■■■□□ 2.17
TTC39C-209ENST00000584250 AK2P54819 239 aa28.58■■■□□ 2.17
TTC39C-209ENST00000584250 PSMC6P62333 389 aa28.58■■■□□ 2.17
TTC39C-209ENST00000584250 PGBD1Q96JS3 809 aa28.58■■■□□ 2.17
TTC39C-209ENST00000584250 SLC26A6Q9BXS9 759 aa28.58■■■□□ 2.17
TTC39C-209ENST00000584250 BCAS3Q9H6U6 928 aa28.58■■■□□ 2.17
TTC39C-209ENST00000584250 MRVI1Q9Y6F6 885 aa28.58■■■□□ 2.17
TTC39C-209ENST00000584250 GRIN2DO15399 1336 aa28.58■■■□□ 2.17
TTC39C-209ENST00000584250 NKRFO15226 690 aaKnown RBP eCLIP28.57■■■□□ 2.16
TTC39C-209ENST00000584250 PQBP1O60828 265 aaKnown RBP28.57■■■□□ 2.16
TTC39C-209ENST00000584250 IFNAR1P17181 557 aa28.57■■■□□ 2.16
TTC39C-209ENST00000584250 SP2Q02086 613 aa28.57■■■□□ 2.16
TTC39C-209ENST00000584250 PPP1R13LQ8WUF5 828 aa28.57■■■□□ 2.16
TTC39C-209ENST00000584250 RIC8AQ9NPQ8 531 aa28.57■■■□□ 2.16
TTC39C-209ENST00000584250 TMEM260Q9NX78 707 aa28.57■■■□□ 2.16
TTC39C-209ENST00000584250 MYH7BA7E2Y1 1941 aa28.57■■■□□ 2.16
TTC39C-209ENST00000584250 SMCO2A6NFE2 343 aa28.56■■■□□ 2.16
TTC39C-209ENST00000584250 ELP1O95163 1332 aa28.56■■■□□ 2.16
TTC39C-209ENST00000584250 MYL3P08590 195 aa28.56■■■□□ 2.16
TTC39C-209ENST00000584250 CDK7P50613 346 aa28.56■■■□□ 2.16
TTC39C-209ENST00000584250 SEMA3FQ13275 785 aa28.56■■■□□ 2.16
TTC39C-209ENST00000584250 AFG1LQ8WV93 481 aa28.56■■■□□ 2.16
TTC39C-209ENST00000584250 ALDH8A1Q9H2A2 487 aaPredicted RBP28.56■■■□□ 2.16
TTC39C-209ENST00000584250 PDLIM7Q9NR12 457 aa28.56■■■□□ 2.16
TTC39C-209ENST00000584250 PCDHA6Q9UN73 950 aa28.56■■■□□ 2.16
TTC39C-209ENST00000584250 PCDHA8Q9Y5H6 950 aa28.56■■■□□ 2.16
TTC39C-209ENST00000584250 A6NJR5 290 aa28.55■■■□□ 2.16
TTC39C-209ENST00000584250 GH1P01241 217 aa28.55■■■□□ 2.16
TTC39C-209ENST00000584250 PURAQ00577 322 aaKnown RBP28.55■■■□□ 2.16
TTC39C-209ENST00000584250 PPP1R18Q6NYC8 613 aa28.55■■■□□ 2.16
TTC39C-209ENST00000584250 PRO3102Q9H379 93 aa28.55■■■□□ 2.16
TTC39C-209ENST00000584250 TRIM43BA6NCK2 446 aa28.54■■■□□ 2.16
TTC39C-209ENST00000584250 LARGE1O95461 756 aa28.54■■■□□ 2.16
TTC39C-209ENST00000584250 MAGEA10P43363 369 aaPredicted RBP28.54■■■□□ 2.16
TTC39C-209ENST00000584250 ADCY7P51828 1080 aa28.54■■■□□ 2.16
TTC39C-209ENST00000584250 SCRN1Q12765 414 aa28.54■■■□□ 2.16
TTC39C-209ENST00000584250 PCNX4Q63HM2 1172 aa28.54■■■□□ 2.16
TTC39C-209ENST00000584250 TRIM43Q96BQ3 446 aaPredicted RBP28.54■■■□□ 2.16
TTC39C-209ENST00000584250 INPP4AQ96PE3 977 aaPredicted RBP28.54■■■□□ 2.16
TTC39C-209ENST00000584250 RNF26Q9BY78 433 aaPredicted RBP28.54■■■□□ 2.16
TTC39C-209ENST00000584250 PRDM5Q9NQX1 630 aaPredicted RBP28.54■■■□□ 2.16
TTC39C-209ENST00000584250 DOCK5Q9H7D0 1870 aa28.53■■■□□ 2.16
TTC39C-209ENST00000584250 A0A0U1RQG5 324 aaPredicted RBP28.53■■■□□ 2.16
TTC39C-209ENST00000584250 hCG_1984214I3L0E3 225 aa28.53■■■□□ 2.16
TTC39C-209ENST00000584250 ARVCFO00192 962 aa28.53■■■□□ 2.16
TTC39C-209ENST00000584250 CPT1AP50416 773 aa28.53■■■□□ 2.16
TTC39C-209ENST00000584250 NEK4P51957 841 aa28.53■■■□□ 2.16
TTC39C-209ENST00000584250 ZNF713Q8N859 430 aaPredicted RBP28.53■■■□□ 2.16
TTC39C-209ENST00000584250 KIF2CQ99661 725 aa28.53■■■□□ 2.16
TTC39C-209ENST00000584250 GDF15Q99988 308 aa28.53■■■□□ 2.16
TTC39C-209ENST00000584250 RBM27Q9P2N5 1060 aaKnown RBP28.53■■■□□ 2.16
TTC39C-209ENST00000584250 ZEB2O60315 1214 aa28.52■■■□□ 2.16
TTC39C-209ENST00000584250 UBA1P22314 1058 aaKnown RBP28.52■■■□□ 2.16
TTC39C-209ENST00000584250 ITGB8P26012 769 aa28.52■■■□□ 2.16
TTC39C-209ENST00000584250 MDM2Q00987 491 aaPredicted RBP28.52■■■□□ 2.16
TTC39C-209ENST00000584250 FAAP100Q0VG06 881 aa28.52■■■□□ 2.16
TTC39C-209ENST00000584250 ANKRD33Q7Z3H0 272 aa28.52■■■□□ 2.16
TTC39C-209ENST00000584250 SLC43A3Q8NBI5 491 aa28.52■■■□□ 2.16
TTC39C-209ENST00000584250 AIFM3Q96NN9 605 aa28.52■■■□□ 2.16
TTC39C-209ENST00000584250 TELO2Q9Y4R8 837 aa28.52■■■□□ 2.16
TTC39C-209ENST00000584250 TRIOBPQ9H2D6 2365 aa28.51■■■□□ 2.15
TTC39C-209ENST00000584250 LTBP2Q14767 1821 aa28.51■■■□□ 2.15
TTC39C-209ENST00000584250 SPDYE3A6NKU9 549 aa28.51■■■□□ 2.15
TTC39C-209ENST00000584250 EIF5BO60841 1220 aaKnown RBP28.51■■■□□ 2.15
TTC39C-209ENST00000584250 MMP3P08254 477 aa28.51■■■□□ 2.15
TTC39C-209ENST00000584250 CLK2P49760 499 aaKnown RBP28.51■■■□□ 2.15
TTC39C-209ENST00000584250 ITGA7Q13683 1181 aa28.51■■■□□ 2.15
TTC39C-209ENST00000584250 VPS54Q9P1Q0 977 aa28.51■■■□□ 2.15
TTC39C-209ENST00000584250 SCN10AQ9Y5Y9 1956 aa28.5■■■□□ 2.15
TTC39C-209ENST00000584250 SPATA31C2B4DYI2 1134 aa28.5■■■□□ 2.15
TTC39C-209ENST00000584250 PFKFB2O60825 505 aa28.5■■■□□ 2.15
TTC39C-209ENST00000584250 CABYRO75952 493 aa28.5■■■□□ 2.15
TTC39C-209ENST00000584250 GGPS1O95749 300 aa28.5■■■□□ 2.15
TTC39C-209ENST00000584250 AKAP17AQ02040 695 aaKnown RBP28.5■■■□□ 2.15
TTC39C-209ENST00000584250 MYSM1Q5VVJ2 828 aa28.5■■■□□ 2.15
TTC39C-209ENST00000584250 JAKMIP3Q5VZ66 844 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms