RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 LMBRD1Q9NUN5 540 aa18.97■□□□□ 0.63
CDK5RAP3-230ENST00000584042 ASTN1O14525 1302 aa18.97■□□□□ 0.63
CDK5RAP3-230ENST00000584042 IGLV3-22A0A075B6J6 115 aa18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 SLC15A5A6NIM6 579 aa18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 B4DLN1 442 aa18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 FAM86B1E9PN63 330 aa18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 TBX3O15119 743 aa18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 FAM86B2P0C5J1 330 aa18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 EDNRBP24530 442 aa18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 ADORA2AP29274 412 aa18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 ZNF76P36508 570 aa18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 ME1P48163 572 aa18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 UBXN2AP68543 259 aa18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 CEP55Q53EZ4 464 aa18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 KRI1Q8N9T8 703 aaKnown RBP18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 FGD4Q96M96 766 aa18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 PURBQ96QR8 312 aaKnown RBP18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 TMEM60Q9H2L4 133 aa18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 SAGE1Q9NXZ1 904 aa18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 FBXO2Q9UK22 296 aaPredicted RBP18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 UBIAD1Q9Y5Z9 338 aa18.96■□□□□ 0.63
CDK5RAP3-230ENST00000584042 SOWAHBA6NEL2 793 aa18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 PRPF40AO75400 957 aaKnown RBP18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 NR3C2P08235 984 aa18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 MARCKSP29966 332 aaPredicted RBP18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 UBE2HP62256 183 aa18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 MRPS9P82933 396 aaKnown RBP18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 CNTN2Q02246 1040 aa18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 CALCRLQ16602 461 aa18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 ZNF467Q7Z7K2 595 aaPredicted RBP18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 SOCS4Q8WXH5 440 aa18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 MTMR9Q96QG7 549 aa18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 MXRA8Q9BRK3 442 aa18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 KCNMB3Q9NPA1 279 aa18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 PCDHA7Q9UN72 937 aa18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 DIS3Q9Y2L1 958 aaKnown RBP18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 SRPRBQ9Y5M8 271 aaKnown RBP18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 CASP8AP2Q9UKL3 1982 aa18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 ZSWIM8A7E2V4 1837 aa18.95■□□□□ 0.62
CDK5RAP3-230ENST00000584042 KIAA1217Q5T5P2 1943 aa18.94■□□□□ 0.62
CDK5RAP3-230ENST00000584042 A0A1W2PQ27 194 aa18.94■□□□□ 0.62
CDK5RAP3-230ENST00000584042 A0A1W2PQ64 194 aa18.94■□□□□ 0.62
CDK5RAP3-230ENST00000584042 A0A1W2PQD8 194 aa18.94■□□□□ 0.62
CDK5RAP3-230ENST00000584042 CUTAO60888 179 aa18.94■□□□□ 0.62
CDK5RAP3-230ENST00000584042 PGK2P07205 417 aa18.94■□□□□ 0.62
CDK5RAP3-230ENST00000584042 ZNF792Q3KQV3 632 aa18.94■□□□□ 0.62
CDK5RAP3-230ENST00000584042 PRR16Q569H4 304 aa18.94■□□□□ 0.62
CDK5RAP3-230ENST00000584042 AXDND1Q5T1B0 1012 aaPredicted RBP18.94■□□□□ 0.62
CDK5RAP3-230ENST00000584042 ADALQ6DHV7 355 aa18.94■□□□□ 0.62
CDK5RAP3-230ENST00000584042 VSIG10LQ86VR7 867 aa18.94■□□□□ 0.62
CDK5RAP3-230ENST00000584042 ETNPPLQ8TBG4 499 aa18.94■□□□□ 0.62
CDK5RAP3-230ENST00000584042 MORC4Q8TE76 937 aa18.94■□□□□ 0.62
CDK5RAP3-230ENST00000584042 RNF186Q9NXI6 227 aa18.94■□□□□ 0.62
CDK5RAP3-230ENST00000584042 MEIS1O00470 390 aa18.93■□□□□ 0.62
CDK5RAP3-230ENST00000584042 MORN1Q5T089 497 aa18.93■□□□□ 0.62
CDK5RAP3-230ENST00000584042 PLA2G4DQ86XP0 818 aa18.93■□□□□ 0.62
CDK5RAP3-230ENST00000584042 ZNF579Q8NAF0 562 aaKnown RBP18.93■□□□□ 0.62
CDK5RAP3-230ENST00000584042 GPRASP2Q96D09 838 aa18.93■□□□□ 0.62
CDK5RAP3-230ENST00000584042 FAM20AQ96MK3 541 aa18.93■□□□□ 0.62
CDK5RAP3-230ENST00000584042 INPP4AQ96PE3 977 aaPredicted RBP18.93■□□□□ 0.62
CDK5RAP3-230ENST00000584042 JADE2Q9NQC1 790 aa18.93■□□□□ 0.62
CDK5RAP3-230ENST00000584042 MRVI1Q9Y6F6 885 aa18.93■□□□□ 0.62
CDK5RAP3-230ENST00000584042 MCM3APO60318 1980 aa18.93■□□□□ 0.62
CDK5RAP3-230ENST00000584042 DOCK3Q8IZD9 2030 aa18.92■□□□□ 0.62
CDK5RAP3-230ENST00000584042 GOLGA6L4A6NEF3 574 aa18.92■□□□□ 0.62
CDK5RAP3-230ENST00000584042 TNPO2O14787 897 aaKnown RBP18.92■□□□□ 0.62
CDK5RAP3-230ENST00000584042 HOXC6P09630 235 aa18.92■□□□□ 0.62
CDK5RAP3-230ENST00000584042 MYCLP12524 364 aaPredicted RBP18.92■□□□□ 0.62
CDK5RAP3-230ENST00000584042 ITGB5P18084 799 aa18.92■□□□□ 0.62
CDK5RAP3-230ENST00000584042 FCGRTP55899 365 aa18.92■□□□□ 0.62
CDK5RAP3-230ENST00000584042 LACTBP83111 547 aaPredicted RBP18.92■□□□□ 0.62
CDK5RAP3-230ENST00000584042 SLFN12Q8IYM2 578 aa18.92■□□□□ 0.62
CDK5RAP3-230ENST00000584042 SLC5A4Q9NY91 659 aa18.92■□□□□ 0.62
CDK5RAP3-230ENST00000584042 ASB14A6NK59 587 aa18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 MSH4O15457 936 aa18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 COBLO75128 1261 aa18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 GADD45BO75293 160 aaPredicted RBP18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 MBD3O95983 291 aa18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 LONP1P36776 959 aaKnown RBP18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 FXR2P51116 673 aaKnown RBP eCLIP18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 PDE4DQ08499 809 aa18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 MAP2K5Q13163 448 aa18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 MTMR1Q13613 665 aa18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 STXBP2Q15833 593 aa18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 TMEM266Q2M3C6 531 aa18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 GNPTABQ3T906 1256 aa18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 DTHD1Q6ZMT9 781 aa18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 NLRX1Q86UT6 975 aa18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 MSL3Q8N5Y2 521 aaKnown RBP18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 CYP2W1Q8TAV3 490 aa18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 HAS1Q92839 578 aa18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 CDHR1Q96JP9 859 aa18.91■□□□□ 0.62
CDK5RAP3-230ENST00000584042 VWA3AA6NCI4 1184 aa18.9■□□□□ 0.62
CDK5RAP3-230ENST00000584042 MAFGO15525 162 aa18.9■□□□□ 0.62
CDK5RAP3-230ENST00000584042 TRPA1O75762 1119 aa18.9■□□□□ 0.62
CDK5RAP3-230ENST00000584042 EIF3JO75822 258 aaKnown RBP18.9■□□□□ 0.62
CDK5RAP3-230ENST00000584042 TBC1D8O95759 1140 aa18.9■□□□□ 0.62
CDK5RAP3-230ENST00000584042 SP3Q02447 781 aa18.9■□□□□ 0.62
CDK5RAP3-230ENST00000584042 DPP9Q86TI2 863 aa18.9■□□□□ 0.62
CDK5RAP3-230ENST00000584042 MRPS27Q92552 414 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms