RNA–Protein interactions for RNA: ENST00000581220.1

RIOK3-204, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 2,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-204ENST00000581220 KAT2BQ92831 832 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 NSUN4Q96CB9 384 aaKnown RBP9.43□□□□□ -0.9
RIOK3-204ENST00000581220 MYCBPQ99417 103 aaPredicted RBP9.43□□□□□ -0.9
RIOK3-204ENST00000581220 NCAPGQ9BPX3 1015 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 SEMA6BQ9H3T3 888 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 SLC39A2Q9NP94 309 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 EHD2Q9NZN4 543 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 NIP7Q9Y221 180 aaKnown RBP eCLIP9.43□□□□□ -0.9
RIOK3-204ENST00000581220 CAPN7Q9Y6W3 813 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 ABCB11O95342 1321 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 FLT1P17948 1338 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 BUB1O43683 1085 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 CYP2D6P10635 497 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 MECOMQ03112 1051 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 EVX2Q03828 476 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 GRM4Q14833 912 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 LETM2Q2VYF4 491 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 TDRD12Q587J7 1177 aaKnown RBP9.42□□□□□ -0.9
RIOK3-204ENST00000581220 FBXW10Q5XX13 1052 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 KRT25Q7Z3Z0 450 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 LRRC15Q8TF66 581 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 TLR10Q9BXR5 811 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 EDEM3Q9BZQ6 932 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 TANGO6Q9C0B7 1094 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 EPB41L5Q9HCM4 733 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 GDF3Q9NR23 364 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 BARHL2Q9NY43 387 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 NFU1Q9UMS0 254 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 WDR90Q96KV7 1748 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 SSU72P8A0A1W2PR75 194 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 EPHB6O15197 1021 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 MEFVO15553 781 aaPredicted RBP9.42□□□□□ -0.9
RIOK3-204ENST00000581220 HEXIM1O94992 359 aaKnown RBP9.42□□□□□ -0.9
RIOK3-204ENST00000581220 ADAMTS2O95450 1211 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 KRT14P02533 472 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 TECP42680 631 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 NT5C2P49902 561 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 GUCY2DQ02846 1103 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 GFPT1Q06210 699 aaPredicted RBP9.42□□□□□ -0.9
RIOK3-204ENST00000581220 NONOQ15233 471 aaKnown RBP eCLIP9.42□□□□□ -0.9
RIOK3-204ENST00000581220 KLHDC7AQ5VTJ3 777 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 PDXDC1Q6P996 788 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 SH2D3CQ8N5H7 860 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 KIAA0895Q8NCT3 520 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 FAM84BQ96KN1 310 aaPredicted RBP9.42□□□□□ -0.9
RIOK3-204ENST00000581220 TSG101Q99816 390 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 NUCKS1Q9H1E3 243 aaKnown RBP9.42□□□□□ -0.9
RIOK3-204ENST00000581220 EPN3Q9H201 632 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 MCM9Q9NXL9 1143 aa9.42□□□□□ -0.9
RIOK3-204ENST00000581220 COL1A1P02452 1464 aaPredicted RBP9.42□□□□□ -0.9
RIOK3-204ENST00000581220 LAMB1P07942 1786 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 GOLGA6L10A6NI86 522 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 STXBP3O00186 592 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 NTSR2O95665 410 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 GLI1P08151 1106 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 LSP1P33241 339 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 CARSP49589 748 aaKnown RBP9.41□□□□□ -0.9
RIOK3-204ENST00000581220 LRRC63Q05C16 580 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 SLC9C1Q4G0N8 1177 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 IQCKQ8N0W5 287 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 CNPY4Q8N129 248 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 WHAMMQ8TF30 809 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 ZNF384Q8TF68 577 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 HPS3Q969F9 1004 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 MTMR8Q96EF0 704 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 MS4A14Q96JA4 679 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 CDK5RAP3Q96JB5 506 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 CABS1Q96KC9 395 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 CAMKK2Q96RR4 588 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 LZTS2Q9BRK4 669 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 MKNK2Q9HBH9 465 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 CCDC87Q9NVE4 849 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 MAD2L2Q9UI95 211 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 MTMR7Q9Y216 660 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 PVALEFA0A1B0GWK0 134 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 GRID2IPA4D2P6 1211 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 NR1D1P20393 614 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 GNA11P29992 359 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 SLC1A4P43007 532 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 NAPAP54920 295 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 ARHGAP27Q6ZUM4 889 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 UNC13DQ70J99 1090 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 NEK8Q86SG6 692 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 CD302Q8IX05 232 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 GUF1Q8N442 669 aaKnown RBP9.41□□□□□ -0.9
RIOK3-204ENST00000581220 MREGQ8N565 214 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 PRPF38AQ8NAV1 312 aaKnown RBP9.41□□□□□ -0.9
RIOK3-204ENST00000581220 BAP1Q92560 729 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 ANKS1AQ92625 1134 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 RNPC3Q96LT9 517 aaKnown RBP9.41□□□□□ -0.9
RIOK3-204ENST00000581220 C6orf50Q9HD87 102 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 BSDC1Q9NW68 430 aaPredicted RBP9.41□□□□□ -0.9
RIOK3-204ENST00000581220 SALL4Q9UJQ4 1053 aa9.41□□□□□ -0.9
RIOK3-204ENST00000581220 ZNF233A6NK53 670 aa9.4□□□□□ -0.9
RIOK3-204ENST00000581220 HMGB1P1B2RPK0 211 aaPredicted RBP9.4□□□□□ -0.9
RIOK3-204ENST00000581220 NKRFO15226 690 aaKnown RBP eCLIP9.4□□□□□ -0.9
RIOK3-204ENST00000581220 FSBPO95073 299 aa9.4□□□□□ -0.9
RIOK3-204ENST00000581220 TSPY3P0CV98 308 aa9.4□□□□□ -0.9
RIOK3-204ENST00000581220 TSPY8P0CW00 308 aa9.4□□□□□ -0.9
RIOK3-204ENST00000581220 HOXA7P31268 230 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms