RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 IL31RAQ8NI17 732 aa12.54□□□□□ -0.4
NDEL1-208ENST00000580237 COPS5Q92905 334 aa12.54□□□□□ -0.4
NDEL1-208ENST00000580237 USP26Q9BXU7 913 aa12.54□□□□□ -0.4
NDEL1-208ENST00000580237 UPF3BQ9BZI7 483 aaKnown RBP12.54□□□□□ -0.4
NDEL1-208ENST00000580237 PSTPIP2Q9H939 334 aa12.54□□□□□ -0.4
NDEL1-208ENST00000580237 EHMT1Q9H9B1 1298 aa12.54□□□□□ -0.4
NDEL1-208ENST00000580237 TMEM39AQ9NV64 488 aa12.54□□□□□ -0.4
NDEL1-208ENST00000580237 PCDH10Q9P2E7 1040 aa12.54□□□□□ -0.4
NDEL1-208ENST00000580237 A0A1W2PPC1 479 aa12.53□□□□□ -0.4
NDEL1-208ENST00000580237 hCG_1984214I3L0E3 225 aa12.53□□□□□ -0.4
NDEL1-208ENST00000580237 ARVCFO00192 962 aa12.53□□□□□ -0.4
NDEL1-208ENST00000580237 ARIH2O95376 493 aa12.53□□□□□ -0.4
NDEL1-208ENST00000580237 RAG1P15918 1043 aa12.53□□□□□ -0.4
NDEL1-208ENST00000580237 PSMC6P62333 389 aa12.53□□□□□ -0.4
NDEL1-208ENST00000580237 ITGA7Q13683 1181 aa12.53□□□□□ -0.4
NDEL1-208ENST00000580237 LY6KQ17RY6 165 aa12.53□□□□□ -0.4
NDEL1-208ENST00000580237 FAM47CQ5HY64 1035 aa12.53□□□□□ -0.4
NDEL1-208ENST00000580237 WWC2Q6AWC2 1192 aa12.53□□□□□ -0.4
NDEL1-208ENST00000580237 PPP1R18Q6NYC8 613 aa12.53□□□□□ -0.4
NDEL1-208ENST00000580237 USP17L6PQ6QN14 398 aa12.53□□□□□ -0.4
NDEL1-208ENST00000580237 ZNF713Q8N859 430 aaPredicted RBP12.53□□□□□ -0.4
NDEL1-208ENST00000580237 GDF15Q99988 308 aa12.53□□□□□ -0.4
NDEL1-208ENST00000580237 MTG1Q9BT17 334 aaPredicted RBP12.53□□□□□ -0.4
NDEL1-208ENST00000580237 KAT6AQ92794 2004 aa12.52□□□□□ -0.4
NDEL1-208ENST00000580237 PIK3CDO00329 1044 aa12.52□□□□□ -0.41
NDEL1-208ENST00000580237 SORBS3O60504 671 aa12.52□□□□□ -0.41
NDEL1-208ENST00000580237 KPNA6O60684 536 aa12.52□□□□□ -0.41
NDEL1-208ENST00000580237 CDC27P30260 824 aa12.52□□□□□ -0.41
NDEL1-208ENST00000580237 ADCY7P51828 1080 aa12.52□□□□□ -0.41
NDEL1-208ENST00000580237 UBE2SQ16763 222 aa12.52□□□□□ -0.41
NDEL1-208ENST00000580237 KCNV1Q6PIU1 500 aa12.52□□□□□ -0.41
NDEL1-208ENST00000580237 ANKRD33Q7Z3H0 272 aa12.52□□□□□ -0.41
NDEL1-208ENST00000580237 SH3RF1Q7Z6J0 888 aa12.52□□□□□ -0.41
NDEL1-208ENST00000580237 DHX37Q8IY37 1157 aaKnown RBP12.52□□□□□ -0.41
NDEL1-208ENST00000580237 AFG1LQ8WV93 481 aa12.52□□□□□ -0.41
NDEL1-208ENST00000580237 ZFP91Q96JP5 570 aaPredicted RBP12.52□□□□□ -0.41
NDEL1-208ENST00000580237 TOX2Q96NM4 488 aa12.52□□□□□ -0.41
NDEL1-208ENST00000580237 ZSWIM6Q9HCJ5 1215 aa12.52□□□□□ -0.41
NDEL1-208ENST00000580237 V9GY48 417 aaPredicted RBP12.52□□□□□ -0.41
NDEL1-208ENST00000580237 FRMPD4Q14CM0 1322 aa12.52□□□□□ -0.41
NDEL1-208ENST00000580237 TANC1Q9C0D5 1861 aa12.52□□□□□ -0.41
NDEL1-208ENST00000580237 NID2Q14112 1375 aa12.52□□□□□ -0.41
NDEL1-208ENST00000580237 MEIS2O14770 477 aa12.51□□□□□ -0.41
NDEL1-208ENST00000580237 CPLX1O14810 134 aa12.51□□□□□ -0.41
NDEL1-208ENST00000580237 STAM2O75886 525 aa12.51□□□□□ -0.41
NDEL1-208ENST00000580237 MMP3P08254 477 aa12.51□□□□□ -0.41
NDEL1-208ENST00000580237 BMP8BP34820 402 aa12.51□□□□□ -0.41
NDEL1-208ENST00000580237 PURAQ00577 322 aaKnown RBP12.51□□□□□ -0.41
NDEL1-208ENST00000580237 ARHGAP1Q07960 439 aa12.51□□□□□ -0.41
NDEL1-208ENST00000580237 CCDC62Q6P9F0 684 aa12.51□□□□□ -0.41
NDEL1-208ENST00000580237 VSIG10LQ86VR7 867 aa12.51□□□□□ -0.41
NDEL1-208ENST00000580237 FAM126BQ8IXS8 530 aa12.51□□□□□ -0.41
NDEL1-208ENST00000580237 TDHQ8IZJ6 230 aa12.51□□□□□ -0.41
NDEL1-208ENST00000580237 CCDC12Q8WUD4 166 aaPredicted RBP12.51□□□□□ -0.41
NDEL1-208ENST00000580237 BADQ92934 168 aa12.51□□□□□ -0.41
NDEL1-208ENST00000580237 SEZ6LQ9BYH1 1024 aa12.51□□□□□ -0.41
NDEL1-208ENST00000580237 TM6SF1Q9BZW5 370 aa12.51□□□□□ -0.41
NDEL1-208ENST00000580237 PRO3102Q9H379 93 aa12.51□□□□□ -0.41
NDEL1-208ENST00000580237 PDRG1Q9NUG6 133 aa12.51□□□□□ -0.41
NDEL1-208ENST00000580237 TRIM43BA6NCK2 446 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 A6NJR5 290 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 NOP56O00567 594 aaKnown RBP12.5□□□□□ -0.41
NDEL1-208ENST00000580237 KIAA0355O15063 1070 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 FIBPO43427 364 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 GGPS1O95749 300 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 SCG2P13521 617 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 UBA1P22314 1058 aaKnown RBP12.5□□□□□ -0.41
NDEL1-208ENST00000580237 ADD1P35611 737 aaKnown RBP12.5□□□□□ -0.41
NDEL1-208ENST00000580237 CCT2P78371 535 aaKnown RBP12.5□□□□□ -0.41
NDEL1-208ENST00000580237 FAAP100Q0VG06 881 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 LAMC2Q13753 1193 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 DGKDQ16760 1214 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 PCNX4Q63HM2 1172 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 CPLX2Q6PUV4 134 aaKnown RBP12.5□□□□□ -0.41
NDEL1-208ENST00000580237 NLRX1Q86UT6 975 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 TRIM22Q8IYM9 498 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 FBXL16Q8N461 479 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 TRIM43Q96BQ3 446 aaPredicted RBP12.5□□□□□ -0.41
NDEL1-208ENST00000580237 SPATA33Q96N06 139 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 SLC26A6Q9BXS9 759 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 AGXT2Q9BYV1 514 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 PPP1R12CQ9BZL4 782 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 GLT8D2Q9H1C3 349 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 MLXIPQ9HAP2 919 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 BARHL2Q9NY43 387 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 RTEL1Q9NZ71 1219 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 DDX41Q9UJV9 622 aaKnown RBP12.5□□□□□ -0.41
NDEL1-208ENST00000580237 NOD1Q9Y239 953 aa12.5□□□□□ -0.41
NDEL1-208ENST00000580237 TRIP12Q14669 1992 aaPredicted RBP12.5□□□□□ -0.41
NDEL1-208ENST00000580237 DNAH12Q6ZR08 3092 aa12.49□□□□□ -0.41
NDEL1-208ENST00000580237 STXBP3O00186 592 aa12.49□□□□□ -0.41
NDEL1-208ENST00000580237 RGS20O76081 388 aa12.49□□□□□ -0.41
NDEL1-208ENST00000580237 ZNF286BP0CG31 522 aa12.49□□□□□ -0.41
NDEL1-208ENST00000580237 FXR1P51114 621 aaKnown RBP eCLIP12.49□□□□□ -0.41
NDEL1-208ENST00000580237 ANAPC15P60006 121 aa12.49□□□□□ -0.41
NDEL1-208ENST00000580237 FPGSQ05932 587 aa12.49□□□□□ -0.41
NDEL1-208ENST00000580237 FUT2Q10981 343 aa12.49□□□□□ -0.41
NDEL1-208ENST00000580237 STK3Q13188 491 aa12.49□□□□□ -0.41
NDEL1-208ENST00000580237 TOB2Q14106 344 aaPredicted RBP12.49□□□□□ -0.41
NDEL1-208ENST00000580237 PFKFB3Q16875 520 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms