RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 ARMT1Q9H993 441 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 NAP1L2Q9ULW6 460 aaPredicted RBP4.01□□□□□ -1.77
CDH19-204ENST00000579658 ADAMTS5Q9UNA0 930 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 RWDD3Q9Y3V2 267 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 LAMA3Q16787 3333 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 MYH8P13535 1937 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 PTPRSQ13332 1948 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 BAZ2AQ9UIF9 1905 aaKnown RBP4.01□□□□□ -1.77
CDH19-204ENST00000579658 TTC41PQ6P2S7 1318 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 ABHD14A-ACY1A0A1B0GW23 586 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 M0R2C6 588 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 RFXAPO00287 272 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 GH2P01242 217 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 MYOGP15173 224 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 AVPR2P30518 371 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 ACVR2BQ13705 512 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 CBX2Q14781 532 aaPredicted RBP4.01□□□□□ -1.77
CDH19-204ENST00000579658 RNF135Q8IUD6 432 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 MAPKAPK5Q8IW41 473 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 KBTBD3Q8NAB2 608 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 CAGE1Q8TC20 777 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 GIPC2Q8TF65 315 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 SDR42E1Q8WUS8 393 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 SREK1Q8WXA9 508 aaKnown RBP4.01□□□□□ -1.77
CDH19-204ENST00000579658 PPP2R3CQ969Q6 453 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 FAM227BQ96M60 508 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 RIOK1Q9BRS2 568 aaKnown RBP4.01□□□□□ -1.77
CDH19-204ENST00000579658 ARHGEF10LQ9HCE6 1279 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 SAP30BPQ9UHR5 308 aaKnown RBP4.01□□□□□ -1.77
CDH19-204ENST00000579658 SERPINB13Q9UIV8 391 aa4.01□□□□□ -1.77
CDH19-204ENST00000579658 NAV1Q8NEY1 1877 aa4□□□□□ -1.77
CDH19-204ENST00000579658 CYP2D7A0A087X1C5 515 aa4□□□□□ -1.77
CDH19-204ENST00000579658 TRIM6-TRIM34B2RNG4 842 aa4□□□□□ -1.77
CDH19-204ENST00000579658 PEX10O60683 326 aa4□□□□□ -1.77
CDH19-204ENST00000579658 AP1G2O75843 785 aa4□□□□□ -1.77
CDH19-204ENST00000579658 CLSTN1O94985 981 aa4□□□□□ -1.77
CDH19-204ENST00000579658 MBD4O95243 580 aa4□□□□□ -1.77
CDH19-204ENST00000579658 GDF11O95390 407 aa4□□□□□ -1.77
CDH19-204ENST00000579658 FDX1P10109 184 aa4□□□□□ -1.77
CDH19-204ENST00000579658 CYP2D6P10635 497 aa4□□□□□ -1.77
CDH19-204ENST00000579658 BECN1Q14457 450 aa4□□□□□ -1.77
CDH19-204ENST00000579658 TTLL4Q14679 1199 aa4□□□□□ -1.77
CDH19-204ENST00000579658 SUZ12Q15022 739 aaKnown RBP4□□□□□ -1.77
CDH19-204ENST00000579658 SHROOM1Q2M3G4 852 aaPredicted RBP4□□□□□ -1.77
CDH19-204ENST00000579658 TSR1Q2NL82 804 aaKnown RBP4□□□□□ -1.77
CDH19-204ENST00000579658 CERKLQ49MI3 558 aaPredicted RBP4□□□□□ -1.77
CDH19-204ENST00000579658 TMEM164Q5U3C3 297 aa4□□□□□ -1.77
CDH19-204ENST00000579658 CNKSR3Q6P9H4 555 aa4□□□□□ -1.77
CDH19-204ENST00000579658 ZNF710Q8N1W2 664 aa4□□□□□ -1.77
CDH19-204ENST00000579658 GPR161Q8N6U8 529 aaKnown RBP4□□□□□ -1.77
CDH19-204ENST00000579658 AFAP1L1Q8TED9 768 aa4□□□□□ -1.77
CDH19-204ENST00000579658 GDPD5Q8WTR4 605 aa4□□□□□ -1.77
CDH19-204ENST00000579658 SPIRE2Q8WWL2 714 aa4□□□□□ -1.77
CDH19-204ENST00000579658 ZBED2Q9BTP6 218 aa4□□□□□ -1.77
CDH19-204ENST00000579658 OSBPL3Q9H4L5 887 aa4□□□□□ -1.77
CDH19-204ENST00000579658 DNAJC18Q9H819 358 aa4□□□□□ -1.77
CDH19-204ENST00000579658 ZHX1Q9UKY1 873 aaPredicted RBP4□□□□□ -1.77
CDH19-204ENST00000579658 PALD1Q9ULE6 856 aa4□□□□□ -1.77
CDH19-204ENST00000579658 PRRC2BQ5JSZ5 2229 aaKnown RBP4□□□□□ -1.77
CDH19-204ENST00000579658 RAD50Q92878 1312 aa4□□□□□ -1.77
CDH19-204ENST00000579658 MYO9BQ13459 2157 aa4□□□□□ -1.77
CDH19-204ENST00000579658 NLRC5Q86WI3 1866 aa4□□□□□ -1.77
CDH19-204ENST00000579658 DNAJC25-GNG10A0A024R161 153 aa4□□□□□ -1.77
CDH19-204ENST00000579658 A0A0D9SFI3 127 aa4□□□□□ -1.77
CDH19-204ENST00000579658 MAGEB6P1A0A0J9YX57 407 aa4□□□□□ -1.77
CDH19-204ENST00000579658 ASB14A6NK59 587 aa4□□□□□ -1.77
CDH19-204ENST00000579658 LOC730098B7Z3J9 87 aa4□□□□□ -1.77
CDH19-204ENST00000579658 STXBP3O00186 592 aa4□□□□□ -1.77
CDH19-204ENST00000579658 ATP2A1O14983 1001 aa4□□□□□ -1.77
CDH19-204ENST00000579658 FOXP2O15409 715 aa4□□□□□ -1.77
CDH19-204ENST00000579658 RNF113AO15541 343 aaKnown RBP4□□□□□ -1.77
CDH19-204ENST00000579658 SDSP20132 328 aa4□□□□□ -1.77
CDH19-204ENST00000579658 STAT3P40763 770 aa4□□□□□ -1.77
CDH19-204ENST00000579658 CCL23P55773 120 aa4□□□□□ -1.77
CDH19-204ENST00000579658 JAG1P78504 1218 aa4□□□□□ -1.77
CDH19-204ENST00000579658 RBL2Q08999 1139 aa4□□□□□ -1.77
CDH19-204ENST00000579658 PLS1Q14651 629 aa4□□□□□ -1.77
CDH19-204ENST00000579658 TTF1Q15361 905 aaPredicted RBP4□□□□□ -1.77
CDH19-204ENST00000579658 ST3GAL2Q16842 350 aa4□□□□□ -1.77
CDH19-204ENST00000579658 BRDTQ58F21 947 aaPredicted RBP4□□□□□ -1.77
CDH19-204ENST00000579658 TTC22Q5TAA0 569 aa4□□□□□ -1.77
CDH19-204ENST00000579658 VPS53Q5VIR6 699 aa4□□□□□ -1.77
CDH19-204ENST00000579658 IQSEC1Q6DN90 963 aa4□□□□□ -1.77
CDH19-204ENST00000579658 NFRKBQ6P4R8 1299 aa4□□□□□ -1.77
CDH19-204ENST00000579658 TMEM179Q6ZVK1 233 aa4□□□□□ -1.77
CDH19-204ENST00000579658 ZNF589Q86UQ0 364 aaPredicted RBP4□□□□□ -1.77
CDH19-204ENST00000579658 NPAS4Q8IUM7 802 aa4□□□□□ -1.77
CDH19-204ENST00000579658 STK11IPQ8N1F8 1099 aa4□□□□□ -1.77
CDH19-204ENST00000579658 GPATCH3Q96I76 525 aa4□□□□□ -1.77
CDH19-204ENST00000579658 TBC1D32Q96NH3 1257 aa4□□□□□ -1.77
CDH19-204ENST00000579658 ALDH8A1Q9H2A2 487 aaPredicted RBP4□□□□□ -1.77
CDH19-204ENST00000579658 CDKN2AIPQ9NXV6 580 aaPredicted RBP4□□□□□ -1.77
CDH19-204ENST00000579658 INSL6Q9Y581 213 aa4□□□□□ -1.77
CDH19-204ENST00000579658 MAFBQ9Y5Q3 323 aaPredicted RBP4□□□□□ -1.77
CDH19-204ENST00000579658 LINC01553A4QN01 128 aa3.99□□□□□ -1.77
CDH19-204ENST00000579658 MBTPS2O43462 519 aa3.99□□□□□ -1.77
CDH19-204ENST00000579658 B4GALT4O60513 344 aa3.99□□□□□ -1.77
CDH19-204ENST00000579658 FLOT1O75955 427 aa3.99□□□□□ -1.77
CDH19-204ENST00000579658 GJB5O95377 273 aa3.99□□□□□ -1.77
CDH19-204ENST00000579658 SNAI1O95863 264 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms