RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 UBA5Q9GZZ9 404 aa24.32■■□□□ 1.48
SPNS3-203ENST00000575185 SUGCTQ9HAC7 445 aa24.32■■□□□ 1.48
SPNS3-203ENST00000575185 MICAL3Q7RTP6 2002 aa24.32■■□□□ 1.48
SPNS3-203ENST00000575185 GH1P01241 217 aa24.31■■□□□ 1.48
SPNS3-203ENST00000575185 CXCL10P02778 98 aa24.31■■□□□ 1.48
SPNS3-203ENST00000575185 CKBP12277 381 aa24.31■■□□□ 1.48
SPNS3-203ENST00000575185 FAM117BQ6P1L5 589 aa24.31■■□□□ 1.48
SPNS3-203ENST00000575185 ZNF589Q86UQ0 364 aaPredicted RBP24.31■■□□□ 1.48
SPNS3-203ENST00000575185 TBC1D10CQ8IV04 446 aa24.31■■□□□ 1.48
SPNS3-203ENST00000575185 WNT8BQ93098 351 aa24.31■■□□□ 1.48
SPNS3-203ENST00000575185 TAAR1Q96RJ0 339 aa24.31■■□□□ 1.48
SPNS3-203ENST00000575185 HELLSQ9NRZ9 838 aa24.31■■□□□ 1.48
SPNS3-203ENST00000575185 PNMA2Q9UL42 364 aa24.31■■□□□ 1.48
SPNS3-203ENST00000575185 LINC01553A4QN01 128 aa24.3■■□□□ 1.48
SPNS3-203ENST00000575185 B4DLN1 442 aa24.3■■□□□ 1.48
SPNS3-203ENST00000575185 GJB5O95377 273 aa24.3■■□□□ 1.48
SPNS3-203ENST00000575185 HSPD1P10809 573 aaKnown RBP24.3■■□□□ 1.48
SPNS3-203ENST00000575185 MRPL12P52815 198 aaKnown RBP24.3■■□□□ 1.48
SPNS3-203ENST00000575185 RBL2Q08999 1139 aa24.3■■□□□ 1.48
SPNS3-203ENST00000575185 EVI5LQ96CN4 794 aa24.3■■□□□ 1.48
SPNS3-203ENST00000575185 ZKSCAN3Q9BRR0 538 aa24.3■■□□□ 1.48
SPNS3-203ENST00000575185 HDAC6Q9UBN7 1215 aa24.3■■□□□ 1.48
SPNS3-203ENST00000575185 GTF2IRD1Q9UHL9 959 aa24.3■■□□□ 1.48
SPNS3-203ENST00000575185 CDC37Q16543 378 aaPredicted RBP24.29■■□□□ 1.48
SPNS3-203ENST00000575185 SYTL5Q8TDW5 730 aaPredicted RBP24.29■■□□□ 1.48
SPNS3-203ENST00000575185 ALG1Q9BT22 464 aa24.29■■□□□ 1.48
SPNS3-203ENST00000575185 UBE2ZQ9H832 354 aaPredicted RBP24.29■■□□□ 1.48
SPNS3-203ENST00000575185 NEDD4P46934 1319 aa24.29■■□□□ 1.48
SPNS3-203ENST00000575185 GPR37L1O60883 481 aa24.28■■□□□ 1.48
SPNS3-203ENST00000575185 ZNF286BP0CG31 522 aa24.28■■□□□ 1.48
SPNS3-203ENST00000575185 ERVK-21P61565 698 aa24.28■■□□□ 1.48
SPNS3-203ENST00000575185 MBTPS1Q14703 1052 aa24.28■■□□□ 1.48
SPNS3-203ENST00000575185 TRAF7Q6Q0C0 670 aa24.28■■□□□ 1.48
SPNS3-203ENST00000575185 RGS22Q8NE09 1264 aa24.28■■□□□ 1.48
SPNS3-203ENST00000575185 TGS1Q96RS0 853 aaKnown RBP24.28■■□□□ 1.48
SPNS3-203ENST00000575185 RAD9AQ99638 391 aa24.28■■□□□ 1.48
SPNS3-203ENST00000575185 LMCD1Q9NZU5 365 aa24.28■■□□□ 1.48
SPNS3-203ENST00000575185 ARIH1Q9Y4X5 557 aaPredicted RBP24.28■■□□□ 1.48
SPNS3-203ENST00000575185 ZMYM6O95789 1325 aa24.28■■□□□ 1.48
SPNS3-203ENST00000575185 MUC6Q6W4X9 2439 aa24.27■■□□□ 1.48
SPNS3-203ENST00000575185 CASTP20810 708 aaKnown RBP24.27■■□□□ 1.48
SPNS3-203ENST00000575185 PSEN2P49810 448 aa24.27■■□□□ 1.48
SPNS3-203ENST00000575185 ZNF200P98182 395 aaPredicted RBP24.27■■□□□ 1.48
SPNS3-203ENST00000575185 TRIM71Q2Q1W2 868 aaKnown RBP24.27■■□□□ 1.48
SPNS3-203ENST00000575185 MCMDC2Q4G0Z9 681 aa24.27■■□□□ 1.48
SPNS3-203ENST00000575185 C7orf31Q8N865 590 aa24.27■■□□□ 1.48
SPNS3-203ENST00000575185 TTC14Q96N46 770 aa24.27■■□□□ 1.48
SPNS3-203ENST00000575185 ABHD14A-ACY1A0A1B0GW23 586 aa24.26■■□□□ 1.47
SPNS3-203ENST00000575185 EIF2AK2P19525 551 aaKnown RBP24.26■■□□□ 1.47
SPNS3-203ENST00000575185 NMIQ13287 307 aaPredicted RBP24.26■■□□□ 1.47
SPNS3-203ENST00000575185 DGKDQ16760 1214 aa24.26■■□□□ 1.47
SPNS3-203ENST00000575185 GPATCH4Q5T3I0 446 aaKnown RBP24.26■■□□□ 1.47
SPNS3-203ENST00000575185 ZNF618Q5T7W0 954 aa24.26■■□□□ 1.47
SPNS3-203ENST00000575185 MFSD6Q6ZSS7 791 aa24.26■■□□□ 1.47
SPNS3-203ENST00000575185 NSUN6Q8TEA1 469 aaKnown RBP24.26■■□□□ 1.47
SPNS3-203ENST00000575185 RMDN3Q96TC7 470 aa24.26■■□□□ 1.47
SPNS3-203ENST00000575185 C17orf80Q9BSJ5 609 aa24.26■■□□□ 1.47
SPNS3-203ENST00000575185 ABCB11O95342 1321 aa24.26■■□□□ 1.47
SPNS3-203ENST00000575185 NLRC5Q86WI3 1866 aa24.26■■□□□ 1.47
SPNS3-203ENST00000575185 PI4K2BG5E9Z4 385 aa24.25■■□□□ 1.47
SPNS3-203ENST00000575185 KCNA5P22460 613 aa24.25■■□□□ 1.47
SPNS3-203ENST00000575185 HIC1Q14526 733 aa24.25■■□□□ 1.47
SPNS3-203ENST00000575185 MFSD10Q14728 455 aa24.25■■□□□ 1.47
SPNS3-203ENST00000575185 STXBP2Q15833 593 aa24.25■■□□□ 1.47
SPNS3-203ENST00000575185 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.25■■□□□ 1.47
SPNS3-203ENST00000575185 DDX41Q9UJV9 622 aaKnown RBP24.25■■□□□ 1.47
SPNS3-203ENST00000575185 ATG2AQ2TAZ0 1938 aa24.24■■□□□ 1.47
SPNS3-203ENST00000575185 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.24■■□□□ 1.47
SPNS3-203ENST00000575185 SORBS3O60504 671 aa24.24■■□□□ 1.47
SPNS3-203ENST00000575185 PARNO95453 639 aaKnown RBP24.24■■□□□ 1.47
SPNS3-203ENST00000575185 F2P00734 622 aa24.24■■□□□ 1.47
SPNS3-203ENST00000575185 PTK7Q13308 1070 aa24.24■■□□□ 1.47
SPNS3-203ENST00000575185 IKBKEQ14164 716 aa24.24■■□□□ 1.47
SPNS3-203ENST00000575185 KIAA0753Q2KHM9 967 aa24.24■■□□□ 1.47
SPNS3-203ENST00000575185 ANKRD45Q5TZF3 282 aa24.24■■□□□ 1.47
SPNS3-203ENST00000575185 ADGRF4Q8IZF3 695 aa24.24■■□□□ 1.47
SPNS3-203ENST00000575185 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.24■■□□□ 1.47
SPNS3-203ENST00000575185 EXOC6Q8TAG9 804 aa24.24■■□□□ 1.47
SPNS3-203ENST00000575185 CCDC171Q6TFL3 1326 aa24.24■■□□□ 1.47
SPNS3-203ENST00000575185 WDFY4Q6ZS81 3184 aa24.24■■□□□ 1.47
SPNS3-203ENST00000575185 C5orf42Q9H799 3197 aa24.24■■□□□ 1.47
SPNS3-203ENST00000575185 HAS3O00219 553 aa24.23■■□□□ 1.47
SPNS3-203ENST00000575185 IL9P15248 144 aa24.23■■□□□ 1.47
SPNS3-203ENST00000575185 PDE1AP54750 535 aa24.23■■□□□ 1.47
SPNS3-203ENST00000575185 QRICH1Q2TAL8 776 aa24.23■■□□□ 1.47
SPNS3-203ENST00000575185 FAM178BQ8IXR5 827 aa24.23■■□□□ 1.47
SPNS3-203ENST00000575185 PNMA1Q8ND90 353 aa24.23■■□□□ 1.47
SPNS3-203ENST00000575185 IWS1Q96ST2 819 aa24.23■■□□□ 1.47
SPNS3-203ENST00000575185 MRVI1Q9Y6F6 885 aa24.23■■□□□ 1.47
SPNS3-203ENST00000575185 LEXMQ3ZCV2 418 aa24.22■■□□□ 1.47
SPNS3-203ENST00000575185 ARHGEF16Q5VV41 709 aa24.22■■□□□ 1.47
SPNS3-203ENST00000575185 PPTC7Q8NI37 304 aa24.22■■□□□ 1.47
SPNS3-203ENST00000575185 EMID1Q96A84 441 aaPredicted RBP24.22■■□□□ 1.47
SPNS3-203ENST00000575185 KATNAL1Q9BW62 490 aa24.22■■□□□ 1.47
SPNS3-203ENST00000575185 EFCAB14O75071 495 aa24.21■■□□□ 1.47
SPNS3-203ENST00000575185 LGR5O75473 907 aa24.21■■□□□ 1.47
SPNS3-203ENST00000575185 MKRN4PQ13434 485 aaPredicted RBP24.21■■□□□ 1.47
SPNS3-203ENST00000575185 GJD3Q8N144 294 aa24.21■■□□□ 1.47
SPNS3-203ENST00000575185 FBXO22Q8NEZ5 403 aa24.21■■□□□ 1.47
SPNS3-203ENST00000575185 ESR2Q92731 530 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms