RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 WDR11Q9BZH6 1224 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 ALDH8A1Q9H2A2 487 aaPredicted RBP10.03□□□□□ -0.8
SMG6-216ENST00000575176 BCAS3Q9H6U6 928 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 NCOA5Q9HCD5 579 aaKnown RBP10.03□□□□□ -0.8
SMG6-216ENST00000575176 RBM28Q9NW13 759 aaKnown RBP10.03□□□□□ -0.8
SMG6-216ENST00000575176 TBX21Q9UL17 535 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 ZMYND8Q9ULU4 1186 aaPredicted RBP10.03□□□□□ -0.8
SMG6-216ENST00000575176 COLQQ9Y215 455 aaPredicted RBP10.03□□□□□ -0.8
SMG6-216ENST00000575176 ARID2Q68CP9 1835 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 SPTBN5Q9NRC6 3674 aaKnown RBP10.02□□□□□ -0.8
SMG6-216ENST00000575176 TRIM43BA6NCK2 446 aa10.02□□□□□ -0.81
SMG6-216ENST00000575176 EVI5O60447 810 aa10.02□□□□□ -0.81
SMG6-216ENST00000575176 CD4P01730 458 aa10.02□□□□□ -0.81
SMG6-216ENST00000575176 SYN1P17600 705 aa10.02□□□□□ -0.81
SMG6-216ENST00000575176 UBA1P22314 1058 aaKnown RBP10.02□□□□□ -0.81
SMG6-216ENST00000575176 METAP2P50579 478 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMG6-216ENST00000575176 PURAQ00577 322 aaKnown RBP10.02□□□□□ -0.81
SMG6-216ENST00000575176 PFKFB3Q16875 520 aaPredicted RBP10.02□□□□□ -0.81
SMG6-216ENST00000575176 PPP1R18Q6NYC8 613 aa10.02□□□□□ -0.81
SMG6-216ENST00000575176 FAM126BQ8IXS8 530 aa10.02□□□□□ -0.81
SMG6-216ENST00000575176 CCDC82Q8N4S0 544 aa10.02□□□□□ -0.81
SMG6-216ENST00000575176 SCFD2Q8WU76 684 aa10.02□□□□□ -0.81
SMG6-216ENST00000575176 KAT2BQ92831 832 aa10.02□□□□□ -0.81
SMG6-216ENST00000575176 TRIM43Q96BQ3 446 aaPredicted RBP10.02□□□□□ -0.81
SMG6-216ENST00000575176 ZFP91Q96JP5 570 aaPredicted RBP10.02□□□□□ -0.81
SMG6-216ENST00000575176 BARHL2Q9NY43 387 aa10.02□□□□□ -0.81
SMG6-216ENST00000575176 RBM27Q9P2N5 1060 aaKnown RBP10.02□□□□□ -0.81
SMG6-216ENST00000575176 DDX41Q9UJV9 622 aaKnown RBP10.02□□□□□ -0.81
SMG6-216ENST00000575176 ELP1O95163 1332 aa10.02□□□□□ -0.81
SMG6-216ENST00000575176 LOXHD1Q8IVV2 1947 aa10.01□□□□□ -0.81
SMG6-216ENST00000575176 ESYT2A0FGR8 921 aa10.01□□□□□ -0.81
SMG6-216ENST00000575176 GCOM1H8Y6P7 765 aaPredicted RBP10.01□□□□□ -0.81
SMG6-216ENST00000575176 CTDNEP1O95476 244 aa10.01□□□□□ -0.81
SMG6-216ENST00000575176 MMP3P08254 477 aa10.01□□□□□ -0.81
SMG6-216ENST00000575176 POLR2MP0CAP2 368 aa10.01□□□□□ -0.81
SMG6-216ENST00000575176 IFNAR1P17181 557 aa10.01□□□□□ -0.81
SMG6-216ENST00000575176 ICAM3P32942 547 aa10.01□□□□□ -0.81
SMG6-216ENST00000575176 MAGEA10P43363 369 aaPredicted RBP10.01□□□□□ -0.81
SMG6-216ENST00000575176 TLE2Q04725 743 aa10.01□□□□□ -0.81
SMG6-216ENST00000575176 PDE4DQ08499 809 aa10.01□□□□□ -0.81
SMG6-216ENST00000575176 FAAP100Q0VG06 881 aa10.01□□□□□ -0.81
SMG6-216ENST00000575176 PPP2R5BQ15173 497 aa10.01□□□□□ -0.81
SMG6-216ENST00000575176 LY6KQ17RY6 165 aa10.01□□□□□ -0.81
SMG6-216ENST00000575176 CXCL17Q6UXB2 119 aa10.01□□□□□ -0.81
SMG6-216ENST00000575176 CHRDL2Q6WN34 429 aa10.01□□□□□ -0.81
SMG6-216ENST00000575176 DPF3Q92784 378 aa10.01□□□□□ -0.81
SMG6-216ENST00000575176 PHKBQ93100 1093 aa10.01□□□□□ -0.81
SMG6-216ENST00000575176 LARP6Q9BRS8 491 aaKnown RBP10.01□□□□□ -0.81
SMG6-216ENST00000575176 TPCN1Q9ULQ1 816 aa10.01□□□□□ -0.81
SMG6-216ENST00000575176 UNC80Q8N2C7 3258 aa10□□□□□ -0.81
SMG6-216ENST00000575176 M0R2N6 131 aa10□□□□□ -0.81
SMG6-216ENST00000575176 KIAA0355O15063 1070 aa10□□□□□ -0.81
SMG6-216ENST00000575176 NKRFO15226 690 aaKnown RBP eCLIP10□□□□□ -0.81
SMG6-216ENST00000575176 DYNC1LI2O43237 492 aaPredicted RBP10□□□□□ -0.81
SMG6-216ENST00000575176 DTNBO60941 627 aa10□□□□□ -0.81
SMG6-216ENST00000575176 PPFIA3O75145 1194 aa10□□□□□ -0.81
SMG6-216ENST00000575176 EIF3JO75822 258 aaKnown RBP10□□□□□ -0.81
SMG6-216ENST00000575176 ITGB5P18084 799 aa10□□□□□ -0.81
SMG6-216ENST00000575176 PSMA5P28066 241 aa10□□□□□ -0.81
SMG6-216ENST00000575176 HOXC8P31273 242 aa10□□□□□ -0.81
SMG6-216ENST00000575176 BMP8BP34820 402 aa10□□□□□ -0.81
SMG6-216ENST00000575176 AK2P54819 239 aa10□□□□□ -0.81
SMG6-216ENST00000575176 PSMC6P62333 389 aa10□□□□□ -0.81
SMG6-216ENST00000575176 SCRN1Q12765 414 aa10□□□□□ -0.81
SMG6-216ENST00000575176 HIC1Q14526 733 aa10□□□□□ -0.81
SMG6-216ENST00000575176 STXBP2Q15833 593 aa10□□□□□ -0.81
SMG6-216ENST00000575176 GNASQ5JWF2 1037 aa10□□□□□ -0.81
SMG6-216ENST00000575176 ARHGEF16Q5VV41 709 aa10□□□□□ -0.81
SMG6-216ENST00000575176 PCNX4Q63HM2 1172 aa10□□□□□ -0.81
SMG6-216ENST00000575176 HEATR3Q7Z4Q2 680 aa10□□□□□ -0.81
SMG6-216ENST00000575176 ZNF274Q96GC6 653 aaPredicted RBP10□□□□□ -0.81
SMG6-216ENST00000575176 RNF26Q9BY78 433 aaPredicted RBP10□□□□□ -0.81
SMG6-216ENST00000575176 RIC8AQ9NPQ8 531 aa10□□□□□ -0.81
SMG6-216ENST00000575176 STARD7Q9NQZ5 370 aa10□□□□□ -0.81
SMG6-216ENST00000575176 CYP46A1Q9Y6A2 500 aa10□□□□□ -0.81
SMG6-216ENST00000575176 V9GY48 417 aaPredicted RBP10□□□□□ -0.81
SMG6-216ENST00000575176 MICAL3Q7RTP6 2002 aa10□□□□□ -0.81
SMG6-216ENST00000575176 hCG_1984214I3L0E3 225 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 ARVCFO00192 962 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 HAS3O00219 553 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 SOX1O00570 391 aaPredicted RBP9.99□□□□□ -0.81
SMG6-216ENST00000575176 PRPF3O43395 683 aaKnown RBP9.99□□□□□ -0.81
SMG6-216ENST00000575176 F2P00734 622 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 TXNP10599 105 aaKnown RBP9.99□□□□□ -0.81
SMG6-216ENST00000575176 SCG2P13521 617 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 KCNA2P16389 499 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 FXR1P51114 621 aaKnown RBP eCLIP9.99□□□□□ -0.81
SMG6-216ENST00000575176 EPHB4P54760 987 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 TTLL4Q14679 1199 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 HSDL1Q3SXM5 330 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 HABP4Q5JVS0 413 aaKnown RBP9.99□□□□□ -0.81
SMG6-216ENST00000575176 MYSM1Q5VVJ2 828 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 SEPT14Q6ZU15 432 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 FCHSD1Q86WN1 690 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 TEX2Q8IWB9 1127 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 ZNF713Q8N859 430 aaPredicted RBP9.99□□□□□ -0.81
SMG6-216ENST00000575176 PCSK9Q8NBP7 692 aaKnown RBP9.99□□□□□ -0.81
SMG6-216ENST00000575176 OR6J1Q8NGC5 347 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 PPP1R13LQ8WUF5 828 aa9.99□□□□□ -0.81
SMG6-216ENST00000575176 AFG1LQ8WV93 481 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms