RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 SHTN1A0MZ66 631 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 LAD1O00515 517 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 TCP1P17987 556 aaKnown RBP16.47■□□□□ 0.23
ABR-228ENST00000574437 NOP2P46087 812 aaKnown RBP16.47■□□□□ 0.23
ABR-228ENST00000574437 PPFIA1Q13136 1202 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 USP17L2Q6R6M4 530 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 KRT27Q7Z3Y8 459 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 POTEDQ86YR6 584 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 TSEN2Q8NCE0 465 aaKnown RBP16.47■□□□□ 0.23
ABR-228ENST00000574437 TBCKQ8TEA7 893 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 SH3RF3Q8TEJ3 882 aaPredicted RBP16.47■□□□□ 0.23
ABR-228ENST00000574437 ARL8AQ96BM9 186 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 C7orf25Q9BPX7 421 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 UTRNP46939 3433 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 CACNA1SQ13698 1873 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 OPA1O60313 960 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 KRT25Q7Z3Z0 450 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 NEK8Q86SG6 692 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 MAPKAPK5Q8IW41 473 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 SH2D3CQ8N5H7 860 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 AK8Q96MA6 479 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 UIMC1Q96RL1 719 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 C6orf50Q9HD87 102 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 RBM12Q9NTZ6 932 aaKnown RBP16.47■□□□□ 0.23
ABR-228ENST00000574437 STIM2Q9P246 746 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 SALL4Q9UJQ4 1053 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 MYH10P35580 1976 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 TAF1P21675 1872 aa16.47■□□□□ 0.23
ABR-228ENST00000574437 ZEB2O60315 1214 aa16.46■□□□□ 0.23
ABR-228ENST00000574437 SSBP05455 408 aaKnown RBP eCLIP16.46■□□□□ 0.23
ABR-228ENST00000574437 PRPHP41219 470 aa16.46■□□□□ 0.23
ABR-228ENST00000574437 TRAPPC3LQ5T215 181 aa16.46■□□□□ 0.23
ABR-228ENST00000574437 TMEM260Q9NX78 707 aa16.46■□□□□ 0.23
ABR-228ENST00000574437 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.46■□□□□ 0.23
ABR-228ENST00000574437 A0A1W2PQJ5 194 aa16.46■□□□□ 0.23
ABR-228ENST00000574437 SLC1A4P43007 532 aa16.46■□□□□ 0.23
ABR-228ENST00000574437 ZSCAN29Q8IWY8 852 aaPredicted RBP16.46■□□□□ 0.23
ABR-228ENST00000574437 EFCAB13Q8IY85 973 aa16.46■□□□□ 0.23
ABR-228ENST00000574437 UBA5Q9GZZ9 404 aa16.46■□□□□ 0.23
ABR-228ENST00000574437 SEC63Q9UGP8 760 aaKnown RBP16.46■□□□□ 0.23
ABR-228ENST00000574437 MYMKA6NI61 221 aa16.46■□□□□ 0.22
ABR-228ENST00000574437 GTF2A1P52655 376 aaPredicted RBP16.46■□□□□ 0.22
ABR-228ENST00000574437 EPHB4P54760 987 aa16.46■□□□□ 0.22
ABR-228ENST00000574437 MAN2A1Q16706 1144 aa16.46■□□□□ 0.22
ABR-228ENST00000574437 TADA2BQ86TJ2 420 aa16.46■□□□□ 0.22
ABR-228ENST00000574437 MAGEF1Q9HAY2 307 aa16.46■□□□□ 0.22
ABR-228ENST00000574437 ZSCAN5CA6NGD5 496 aaPredicted RBP16.45■□□□□ 0.22
ABR-228ENST00000574437 GUCY2FP51841 1108 aa16.45■□□□□ 0.22
ABR-228ENST00000574437 PDCLQ13371 301 aa16.45■□□□□ 0.22
ABR-228ENST00000574437 SF3B3Q15393 1217 aaKnown RBP16.45■□□□□ 0.22
ABR-228ENST00000574437 FIGNQ5HY92 759 aa16.45■□□□□ 0.22
ABR-228ENST00000574437 HAUS3Q68CZ6 603 aa16.45■□□□□ 0.22
ABR-228ENST00000574437 GALNT17Q6IS24 598 aa16.45■□□□□ 0.22
ABR-228ENST00000574437 MTMR8Q96EF0 704 aa16.45■□□□□ 0.22
ABR-228ENST00000574437 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.45■□□□□ 0.22
ABR-228ENST00000574437 KANSL2Q9H9L4 492 aa16.45■□□□□ 0.22
ABR-228ENST00000574437 SIK3Q9Y2K2 1263 aa16.45■□□□□ 0.22
ABR-228ENST00000574437 FAM169AQ9Y6X4 670 aa16.45■□□□□ 0.22
ABR-228ENST00000574437 GOLGA8KD6RF30 607 aa16.45■□□□□ 0.22
ABR-228ENST00000574437 KRT14P02533 472 aa16.45■□□□□ 0.22
ABR-228ENST00000574437 CDK17Q00537 523 aa16.45■□□□□ 0.22
ABR-228ENST00000574437 TMED8Q6PL24 325 aaPredicted RBP16.45■□□□□ 0.22
ABR-228ENST00000574437 CCDC84Q86UT8 332 aaPredicted RBP16.45■□□□□ 0.22
ABR-228ENST00000574437 GLIS3Q8NEA6 775 aa16.45■□□□□ 0.22
ABR-228ENST00000574437 NOX5Q96PH1 765 aa16.45■□□□□ 0.22
ABR-228ENST00000574437 MMTAG2Q9BU76 263 aaKnown RBP16.45■□□□□ 0.22
ABR-228ENST00000574437 NFU1Q9UMS0 254 aa16.45■□□□□ 0.22
ABR-228ENST00000574437 BTAF1O14981 1849 aa16.45■□□□□ 0.22
ABR-228ENST00000574437 POTEMA6NI47 508 aa16.44■□□□□ 0.22
ABR-228ENST00000574437 FTCDO95954 541 aa16.44■□□□□ 0.22
ABR-228ENST00000574437 LDHBP07195 334 aaKnown RBP16.44■□□□□ 0.22
ABR-228ENST00000574437 GNA11P29992 359 aa16.44■□□□□ 0.22
ABR-228ENST00000574437 CCDC40Q4G0X9 1142 aa16.44■□□□□ 0.22
ABR-228ENST00000574437 CENPPQ6IPU0 288 aa16.44■□□□□ 0.22
ABR-228ENST00000574437 DAGLBQ8NCG7 672 aa16.44■□□□□ 0.22
ABR-228ENST00000574437 TBC1D7Q9P0N9 293 aa16.44■□□□□ 0.22
ABR-228ENST00000574437 PPP1R2P41236 205 aa16.44■□□□□ 0.22
ABR-228ENST00000574437 GUCY2DQ02846 1103 aa16.44■□□□□ 0.22
ABR-228ENST00000574437 RC3H1Q5TC82 1133 aaKnown RBP16.44■□□□□ 0.22
ABR-228ENST00000574437 IPO4Q8TEX9 1081 aaKnown RBP16.44■□□□□ 0.22
ABR-228ENST00000574437 CCDC43Q96MW1 224 aaKnown RBP16.44■□□□□ 0.22
ABR-228ENST00000574437 PIGSQ96S52 555 aa16.44■□□□□ 0.22
ABR-228ENST00000574437 EPB41L5Q9HCM4 733 aa16.44■□□□□ 0.22
ABR-228ENST00000574437 PACSIN2Q9UNF0 486 aaPredicted RBP16.44■□□□□ 0.22
ABR-228ENST00000574437 A0A087WUV0 522 aaPredicted RBP16.44■□□□□ 0.22
ABR-228ENST00000574437 MARCH6O60337 910 aa16.44■□□□□ 0.22
ABR-228ENST00000574437 ICE2Q659A1 982 aa16.44■□□□□ 0.22
ABR-228ENST00000574437 PROM2Q8N271 834 aa16.44■□□□□ 0.22
ABR-228ENST00000574437 LARP4BQ92615 738 aaKnown RBP16.44■□□□□ 0.22
ABR-228ENST00000574437 NLRP3Q96P20 1036 aa16.44■□□□□ 0.22
ABR-228ENST00000574437 ZMYND12Q9H0C1 365 aa16.44■□□□□ 0.22
ABR-228ENST00000574437 CENPHQ9H3R5 247 aa16.44■□□□□ 0.22
ABR-228ENST00000574437 NDUFAB1O14561 156 aa16.43■□□□□ 0.22
ABR-228ENST00000574437 ERLIN2O94905 339 aa16.43■□□□□ 0.22
ABR-228ENST00000574437 FGFR1OPO95684 399 aaKnown RBP16.43■□□□□ 0.22
ABR-228ENST00000574437 CARSP49589 748 aaKnown RBP16.43■□□□□ 0.22
ABR-228ENST00000574437 CALCRLQ16602 461 aa16.43■□□□□ 0.22
ABR-228ENST00000574437 CFAP58Q5T655 872 aa16.43■□□□□ 0.22
ABR-228ENST00000574437 REXO1Q8N1G1 1221 aaKnown RBP16.43■□□□□ 0.22
ABR-228ENST00000574437 ZIM3Q96PE6 472 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms