RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 EP400NLQ6ZTU2 488 aa14.03□□□□□ -0.16
CTNS-208ENST00000574218 CHST3Q7LGC8 479 aa14.03□□□□□ -0.16
CTNS-208ENST00000574218 SESTD1Q86VW0 696 aa14.03□□□□□ -0.16
CTNS-208ENST00000574218 AFG1LQ8WV93 481 aa14.03□□□□□ -0.16
CTNS-208ENST00000574218 TTC41PQ6P2S7 1318 aa14.02□□□□□ -0.17
CTNS-208ENST00000574218 WDR19Q8NEZ3 1342 aa14.02□□□□□ -0.17
CTNS-208ENST00000574218 CXCL10P02778 98 aa14.02□□□□□ -0.17
CTNS-208ENST00000574218 AMHP03971 560 aa14.02□□□□□ -0.17
CTNS-208ENST00000574218 CKBP12277 381 aa14.02□□□□□ -0.17
CTNS-208ENST00000574218 EDNRBP24530 442 aa14.02□□□□□ -0.17
CTNS-208ENST00000574218 MRE11P49959 708 aa14.02□□□□□ -0.17
CTNS-208ENST00000574218 DGKDQ16760 1214 aa14.02□□□□□ -0.17
CTNS-208ENST00000574218 SEPT14Q6ZU15 432 aa14.02□□□□□ -0.17
CTNS-208ENST00000574218 CLEC4DQ8WXI8 215 aa14.02□□□□□ -0.17
CTNS-208ENST00000574218 ALG1Q9BT22 464 aa14.02□□□□□ -0.17
CTNS-208ENST00000574218 KCNH6Q9H252 994 aa14.02□□□□□ -0.17
CTNS-208ENST00000574218 INSL6Q9Y581 213 aa14.02□□□□□ -0.17
CTNS-208ENST00000574218 DCXO43602 365 aa14.01□□□□□ -0.17
CTNS-208ENST00000574218 USH1GQ495M9 461 aa14.01□□□□□ -0.17
CTNS-208ENST00000574218 ZMYM1Q5SVZ6 1142 aa14.01□□□□□ -0.17
CTNS-208ENST00000574218 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.01□□□□□ -0.17
CTNS-208ENST00000574218 SAMD11Q96NU1 681 aa14.01□□□□□ -0.17
CTNS-208ENST00000574218 TMEM47Q9BQJ4 181 aa14.01□□□□□ -0.17
CTNS-208ENST00000574218 INCENPQ9NQS7 918 aa14.01□□□□□ -0.17
CTNS-208ENST00000574218 GTF2IRD1Q9UHL9 959 aa14.01□□□□□ -0.17
CTNS-208ENST00000574218 KAT6AQ92794 2004 aa14□□□□□ -0.17
CTNS-208ENST00000574218 EMSYQ7Z589 1322 aa14□□□□□ -0.17
CTNS-208ENST00000574218 GRXCR2A6NFK2 248 aa14□□□□□ -0.17
CTNS-208ENST00000574218 ORC4O43929 436 aa14□□□□□ -0.17
CTNS-208ENST00000574218 NBNO60934 754 aa14□□□□□ -0.17
CTNS-208ENST00000574218 ARIH2O95376 493 aa14□□□□□ -0.17
CTNS-208ENST00000574218 PSEN2P49810 448 aa14□□□□□ -0.17
CTNS-208ENST00000574218 RBL2Q08999 1139 aa14□□□□□ -0.17
CTNS-208ENST00000574218 PTK7Q13308 1070 aa14□□□□□ -0.17
CTNS-208ENST00000574218 LY6KQ17RY6 165 aa14□□□□□ -0.17
CTNS-208ENST00000574218 DHX37Q8IY37 1157 aaKnown RBP14□□□□□ -0.17
CTNS-208ENST00000574218 MYOCDQ8IZQ8 938 aa14□□□□□ -0.17
CTNS-208ENST00000574218 DHX38Q92620 1227 aaKnown RBP14□□□□□ -0.17
CTNS-208ENST00000574218 MRPL38Q96DV4 380 aaKnown RBP14□□□□□ -0.17
CTNS-208ENST00000574218 C17orf80Q9BSJ5 609 aa14□□□□□ -0.17
CTNS-208ENST00000574218 UPF3BQ9BZI7 483 aaKnown RBP14□□□□□ -0.17
CTNS-208ENST00000574218 HDAC6Q9UBN7 1215 aa14□□□□□ -0.17
CTNS-208ENST00000574218 ANAPC4Q9UJX5 808 aa14□□□□□ -0.17
CTNS-208ENST00000574218 LGR5O75473 907 aa13.99□□□□□ -0.17
CTNS-208ENST00000574218 PDHBP11177 359 aa13.99□□□□□ -0.17
CTNS-208ENST00000574218 NOVP48745 357 aa13.99□□□□□ -0.17
CTNS-208ENST00000574218 ARHGAP1Q07960 439 aa13.99□□□□□ -0.17
CTNS-208ENST00000574218 MFSD10Q14728 455 aa13.99□□□□□ -0.17
CTNS-208ENST00000574218 STXBP2Q15833 593 aa13.99□□□□□ -0.17
CTNS-208ENST00000574218 CCDC62Q6P9F0 684 aa13.99□□□□□ -0.17
CTNS-208ENST00000574218 RGS22Q8NE09 1264 aa13.99□□□□□ -0.17
CTNS-208ENST00000574218 NSUN6Q8TEA1 469 aaKnown RBP13.99□□□□□ -0.17
CTNS-208ENST00000574218 ABCB11O95342 1321 aa13.98□□□□□ -0.17
CTNS-208ENST00000574218 H3BQ06 376 aaPredicted RBP13.98□□□□□ -0.17
CTNS-208ENST00000574218 NHLH1Q02575 133 aa13.98□□□□□ -0.17
CTNS-208ENST00000574218 ZNF543Q08ER8 600 aa13.98□□□□□ -0.17
CTNS-208ENST00000574218 GPM6BQ13491 265 aa13.98□□□□□ -0.17
CTNS-208ENST00000574218 GPNMBQ14956 572 aa13.98□□□□□ -0.17
CTNS-208ENST00000574218 KIAA0753Q2KHM9 967 aa13.98□□□□□ -0.17
CTNS-208ENST00000574218 ZNF618Q5T7W0 954 aa13.98□□□□□ -0.17
CTNS-208ENST00000574218 MCF2L2Q86YR7 1114 aa13.98□□□□□ -0.17
CTNS-208ENST00000574218 MIER1Q8N108 512 aa13.98□□□□□ -0.17
CTNS-208ENST00000574218 BANK1Q8NDB2 785 aa13.98□□□□□ -0.17
CTNS-208ENST00000574218 KAT2BQ92831 832 aa13.98□□□□□ -0.17
CTNS-208ENST00000574218 IWS1Q96ST2 819 aa13.98□□□□□ -0.17
CTNS-208ENST00000574218 YME1L1Q96TA2 773 aa13.98□□□□□ -0.17
CTNS-208ENST00000574218 MAF1Q9H063 256 aa13.98□□□□□ -0.17
CTNS-208ENST00000574218 DCTPP1Q9H773 170 aa13.98□□□□□ -0.17
CTNS-208ENST00000574218 ZBTB47Q9UFB7 747 aaPredicted RBP13.98□□□□□ -0.17
CTNS-208ENST00000574218 PRKAG3Q9UGI9 489 aa13.98□□□□□ -0.17
CTNS-208ENST00000574218 MRVI1Q9Y6F6 885 aa13.98□□□□□ -0.17
CTNS-208ENST00000574218 LAMC2Q13753 1193 aa13.97□□□□□ -0.17
CTNS-208ENST00000574218 EPC2Q52LR7 807 aa13.97□□□□□ -0.17
CTNS-208ENST00000574218 GPATCH4Q5T3I0 446 aaKnown RBP13.97□□□□□ -0.17
CTNS-208ENST00000574218 ARHGEF16Q5VV41 709 aa13.97□□□□□ -0.17
CTNS-208ENST00000574218 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.97□□□□□ -0.17
CTNS-208ENST00000574218 NEK9Q8TD19 979 aa13.97□□□□□ -0.17
CTNS-208ENST00000574218 PABPC5Q96DU9 382 aaKnown RBP13.97□□□□□ -0.17
CTNS-208ENST00000574218 MFSD14AQ96MC6 490 aa13.97□□□□□ -0.17
CTNS-208ENST00000574218 FBXL18Q96ME1 805 aa13.97□□□□□ -0.17
CTNS-208ENST00000574218 CTAGE1Q96RT6 745 aa13.97□□□□□ -0.17
CTNS-208ENST00000574218 RMDN3Q96TC7 470 aa13.97□□□□□ -0.17
CTNS-208ENST00000574218 NSUN3Q9H649 340 aaKnown RBP13.97□□□□□ -0.17
CTNS-208ENST00000574218 TCP11L1Q9NUJ3 509 aa13.97□□□□□ -0.17
CTNS-208ENST00000574218 ATG2AQ2TAZ0 1938 aa13.96□□□□□ -0.17
CTNS-208ENST00000574218 RSPH10B2B2RC85 870 aa13.96□□□□□ -0.17
CTNS-208ENST00000574218 RSPH10BP0C881 870 aa13.96□□□□□ -0.17
CTNS-208ENST00000574218 ZNF286BP0CG31 522 aa13.96□□□□□ -0.17
CTNS-208ENST00000574218 THPOP40225 353 aa13.96□□□□□ -0.17
CTNS-208ENST00000574218 TCTN1Q2MV58 587 aa13.96□□□□□ -0.17
CTNS-208ENST00000574218 DBF4BQ8NFT6 615 aa13.96□□□□□ -0.17
CTNS-208ENST00000574218 TTC14Q96N46 770 aa13.96□□□□□ -0.17
CTNS-208ENST00000574218 TAAR1Q96RJ0 339 aa13.96□□□□□ -0.17
CTNS-208ENST00000574218 POP1Q99575 1024 aaKnown RBP13.96□□□□□ -0.17
CTNS-208ENST00000574218 CLDND1Q9NY35 253 aa13.96□□□□□ -0.17
CTNS-208ENST00000574218 ZNF318Q5VUA4 2279 aa13.95□□□□□ -0.18
CTNS-208ENST00000574218 MYO7AQ13402 2215 aa13.95□□□□□ -0.18
CTNS-208ENST00000574218 H3BNC9 293 aa13.95□□□□□ -0.18
CTNS-208ENST00000574218 NCK2O43639 380 aa13.95□□□□□ -0.18
CTNS-208ENST00000574218 DHX16O60231 1041 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms