RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 RIC8AQ9NPQ8 531 aa16.01■□□□□ 0.15
RPAIN-211ENST00000572174 SH3GLB2Q9NR46 395 aa16.01■□□□□ 0.15
RPAIN-211ENST00000572174 POLR3EQ9NVU0 708 aa16.01■□□□□ 0.15
RPAIN-211ENST00000572174 KAT6AQ92794 2004 aa16.01■□□□□ 0.15
RPAIN-211ENST00000572174 ELP1O95163 1332 aa16■□□□□ 0.15
RPAIN-211ENST00000572174 STXBP3O00186 592 aa16■□□□□ 0.15
RPAIN-211ENST00000572174 MEIS2O14770 477 aa16■□□□□ 0.15
RPAIN-211ENST00000572174 DEXIO95424 95 aa16■□□□□ 0.15
RPAIN-211ENST00000572174 GH1P01241 217 aa16■□□□□ 0.15
RPAIN-211ENST00000572174 MYCLP12524 364 aaPredicted RBP16■□□□□ 0.15
RPAIN-211ENST00000572174 XBP1P17861 261 aa16■□□□□ 0.15
RPAIN-211ENST00000572174 ACLYP53396 1101 aa16■□□□□ 0.15
RPAIN-211ENST00000572174 CCT2P78371 535 aaKnown RBP16■□□□□ 0.15
RPAIN-211ENST00000572174 PCNX4Q63HM2 1172 aa16■□□□□ 0.15
RPAIN-211ENST00000572174 SEPT14Q6ZU15 432 aa16■□□□□ 0.15
RPAIN-211ENST00000572174 VSIG10LQ86VR7 867 aa16■□□□□ 0.15
RPAIN-211ENST00000572174 LENG1Q96BZ8 264 aaPredicted RBP16■□□□□ 0.15
RPAIN-211ENST00000572174 CDHR1Q96JP9 859 aa16■□□□□ 0.15
RPAIN-211ENST00000572174 SLC26A6Q9BXS9 759 aa16■□□□□ 0.15
RPAIN-211ENST00000572174 C22orf23Q9BZE7 217 aa16■□□□□ 0.15
RPAIN-211ENST00000572174 STARD7Q9NQZ5 370 aa16■□□□□ 0.15
RPAIN-211ENST00000572174 PDGFCQ9NRA1 345 aa16■□□□□ 0.15
RPAIN-211ENST00000572174 MRVI1Q9Y6F6 885 aa16■□□□□ 0.15
RPAIN-211ENST00000572174 SCN10AQ9Y5Y9 1956 aa16■□□□□ 0.15
RPAIN-211ENST00000572174 DOCK5Q9H7D0 1870 aa15.99■□□□□ 0.15
RPAIN-211ENST00000572174 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.99■□□□□ 0.15
RPAIN-211ENST00000572174 A0A1W2PQ45 241 aaPredicted RBP15.99■□□□□ 0.15
RPAIN-211ENST00000572174 A0A1W2PQY0 241 aa15.99■□□□□ 0.15
RPAIN-211ENST00000572174 hCG_1642624A0A1W2PR95 340 aa15.99■□□□□ 0.15
RPAIN-211ENST00000572174 DYNC1LI2O43237 492 aaPredicted RBP15.99■□□□□ 0.15
RPAIN-211ENST00000572174 RBM25P49756 843 aaKnown RBP15.99■□□□□ 0.15
RPAIN-211ENST00000572174 NTRK3Q16288 839 aa15.99■□□□□ 0.15
RPAIN-211ENST00000572174 KCNA10Q16322 511 aa15.99■□□□□ 0.15
RPAIN-211ENST00000572174 USP17L6PQ6QN14 398 aa15.99■□□□□ 0.15
RPAIN-211ENST00000572174 OR6J1Q8NGC5 347 aa15.99■□□□□ 0.15
RPAIN-211ENST00000572174 WASF1Q92558 559 aa15.99■□□□□ 0.15
RPAIN-211ENST00000572174 PRKAG2Q9UGJ0 569 aa15.99■□□□□ 0.15
RPAIN-211ENST00000572174 STK36Q9NRP7 1315 aa15.98■□□□□ 0.15
RPAIN-211ENST00000572174 SMCO2A6NFE2 343 aa15.98■□□□□ 0.15
RPAIN-211ENST00000572174 ADCY6O43306 1168 aa15.98■□□□□ 0.15
RPAIN-211ENST00000572174 PFKFB2O60825 505 aa15.98■□□□□ 0.15
RPAIN-211ENST00000572174 SEC24BO95487 1268 aa15.98■□□□□ 0.15
RPAIN-211ENST00000572174 ASGR1P07306 291 aa15.98■□□□□ 0.15
RPAIN-211ENST00000572174 AK2P54819 239 aa15.98■□□□□ 0.15
RPAIN-211ENST00000572174 SNX17Q15036 470 aa15.98■□□□□ 0.15
RPAIN-211ENST00000572174 GALNT17Q6IS24 598 aa15.98■□□□□ 0.15
RPAIN-211ENST00000572174 SLC39A5Q6ZMH5 540 aa15.98■□□□□ 0.15
RPAIN-211ENST00000572174 NLRX1Q86UT6 975 aa15.98■□□□□ 0.15
RPAIN-211ENST00000572174 GIMAP8Q8ND71 665 aaPredicted RBP15.98■□□□□ 0.15
RPAIN-211ENST00000572174 EMID1Q96A84 441 aaPredicted RBP15.98■□□□□ 0.15
RPAIN-211ENST00000572174 VTI1AQ96AJ9 217 aa15.98■□□□□ 0.15
RPAIN-211ENST00000572174 ZMYND12Q9H0C1 365 aa15.98■□□□□ 0.15
RPAIN-211ENST00000572174 NCOA5Q9HCD5 579 aaKnown RBP15.98■□□□□ 0.15
RPAIN-211ENST00000572174 A0A0U1RQG5 324 aaPredicted RBP15.97■□□□□ 0.15
RPAIN-211ENST00000572174 MAFGO15525 162 aa15.97■□□□□ 0.15
RPAIN-211ENST00000572174 FIBPO43427 364 aa15.97■□□□□ 0.15
RPAIN-211ENST00000572174 STK3Q13188 491 aa15.97■□□□□ 0.15
RPAIN-211ENST00000572174 LAMC2Q13753 1193 aa15.97■□□□□ 0.15
RPAIN-211ENST00000572174 CCSAPQ6IQ19 270 aaPredicted RBP15.97■□□□□ 0.15
RPAIN-211ENST00000572174 CCDC62Q6P9F0 684 aa15.97■□□□□ 0.15
RPAIN-211ENST00000572174 C7orf61Q8IZ16 206 aa15.97■□□□□ 0.15
RPAIN-211ENST00000572174 REXO1Q8N1G1 1221 aaKnown RBP15.97■□□□□ 0.15
RPAIN-211ENST00000572174 PHKBQ93100 1093 aa15.97■□□□□ 0.15
RPAIN-211ENST00000572174 GTF3C3Q9Y5Q9 886 aa15.97■□□□□ 0.15
RPAIN-211ENST00000572174 ST18O60284 1047 aa15.96■□□□□ 0.15
RPAIN-211ENST00000572174 ICAM3P32942 547 aa15.96■□□□□ 0.15
RPAIN-211ENST00000572174 RTP1P59025 263 aa15.96■□□□□ 0.15
RPAIN-211ENST00000572174 NEDD9Q14511 834 aa15.96■□□□□ 0.15
RPAIN-211ENST00000572174 RABEP1Q15276 862 aa15.96■□□□□ 0.15
RPAIN-211ENST00000572174 LRRC26Q2I0M4 334 aa15.96■□□□□ 0.15
RPAIN-211ENST00000572174 DHX37Q8IY37 1157 aaKnown RBP15.96■□□□□ 0.15
RPAIN-211ENST00000572174 FERMT2Q96AC1 680 aa15.96■□□□□ 0.15
RPAIN-211ENST00000572174 GPRASP2Q96D09 838 aa15.96■□□□□ 0.15
RPAIN-211ENST00000572174 TOX2Q96NM4 488 aa15.96■□□□□ 0.15
RPAIN-211ENST00000572174 INPP4AQ96PE3 977 aaPredicted RBP15.96■□□□□ 0.15
RPAIN-211ENST00000572174 DDX41Q9UJV9 622 aaKnown RBP15.96■□□□□ 0.15
RPAIN-211ENST00000572174 TPCN1Q9ULQ1 816 aa15.96■□□□□ 0.15
RPAIN-211ENST00000572174 PCDHA6Q9UN73 950 aa15.96■□□□□ 0.15
RPAIN-211ENST00000572174 PCDHA8Q9Y5H6 950 aa15.96■□□□□ 0.15
RPAIN-211ENST00000572174 DDX49Q9Y6V7 483 aaKnown RBP15.96■□□□□ 0.15
RPAIN-211ENST00000572174 LTBP2Q14767 1821 aa15.96■□□□□ 0.14
RPAIN-211ENST00000572174 MYADML2A6NDP7 307 aa15.95■□□□□ 0.14
RPAIN-211ENST00000572174 A6NJR5 290 aa15.95■□□□□ 0.14
RPAIN-211ENST00000572174 DCDC2CA8MYV0 355 aa15.95■□□□□ 0.14
RPAIN-211ENST00000572174 TLR3O15455 904 aaKnown RBP15.95■□□□□ 0.14
RPAIN-211ENST00000572174 ATN1P54259 1190 aaPredicted RBP15.95■□□□□ 0.14
RPAIN-211ENST00000572174 SCRN1Q12765 414 aa15.95■□□□□ 0.14
RPAIN-211ENST00000572174 PKN1Q16512 942 aa15.95■□□□□ 0.14
RPAIN-211ENST00000572174 DGKDQ16760 1214 aa15.95■□□□□ 0.14
RPAIN-211ENST00000572174 UBE2SQ16763 222 aa15.95■□□□□ 0.14
RPAIN-211ENST00000572174 PPTC7Q8NI37 304 aa15.95■□□□□ 0.14
RPAIN-211ENST00000572174 ZSCAN31Q96LW9 406 aaPredicted RBP15.95■□□□□ 0.14
RPAIN-211ENST00000572174 KATNAL1Q9BW62 490 aa15.95■□□□□ 0.14
RPAIN-211ENST00000572174 ANO3Q9BYT9 981 aa15.95■□□□□ 0.14
RPAIN-211ENST00000572174 SH2B1Q9NRF2 756 aaPredicted RBP15.95■□□□□ 0.14
RPAIN-211ENST00000572174 LIMCH1Q9UPQ0 1083 aa15.95■□□□□ 0.14
RPAIN-211ENST00000572174 ATP11BQ9Y2G3 1177 aa15.95■□□□□ 0.14
RPAIN-211ENST00000572174 MYH9P35579 1960 aaKnown RBP15.95■□□□□ 0.14
RPAIN-211ENST00000572174 CTAGE5O15320 804 aa15.94■□□□□ 0.14
RPAIN-211ENST00000572174 BEX3Q00994 111 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms