RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	GGCX	P38435	758 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	SPECC1	Q5M775	1068 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	TTC38	Q5R3I4	469 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	KCNV1	Q6PIU1	500 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	PIK3AP1	Q6ZUJ8	805 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	TRIML1	Q8N9V2	468 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	DAGLB	Q8NCG7	672 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	CCDC51	Q96ER9	411 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	PRMT6	Q96LA8	375 aa	Predicted RBP	13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	FAM210A	Q96ND0	272 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	GML	Q99445	158 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	PI4KB	Q9UBF8	816 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	SHTN1	A0MZ66	631 aa		13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	GOLGA6C	A6NDK9	693 aa		13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	PSMD14	O00487	310 aa		13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	RAD17	O75943	681 aa		13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	ABL1	P00519	1130 aa		13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	VIL1	P09327	827 aa	Known RBP	13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	GOLGA6D	P0CG33	693 aa		13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	CASP14	P31944	242 aa		13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	INPP5B	P32019	993 aa		13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	TRAPPC10	P48553	1259 aa		13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	IRAK1	P51617	712 aa		13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	ASPRV1	Q53RT3	343 aa		13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	CCDC125	Q86Z20	511 aa		13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	FAXDC2	Q96IV6	333 aa		13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	CCDC17	Q96LX7	622 aa		13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	MED15	Q96RN5	788 aa		13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	RIOX1	Q9H6W3	641 aa		13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	GOLGA6A	Q9NYA3	693 aa		13.32	□□□□□ -0.28
SPG7-222	ENST00000569820	BMP15	O95972	392 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	ERCC5	P28715	1186 aa	Predicted RBP	13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	SARS	P49591	514 aa	Known RBP	13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	TGFB2	P61812	414 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	APTX	Q7Z2E3	356 aa	Known RBP	13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	TMTC1	Q8IUR5	882 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	GIMAP7	Q8NHV1	300 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	RASGRP4	Q8TDF6	673 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	SPDYE2B	A6NHP3	402 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	MPHOSPH10	O00566	681 aa	Known RBP	13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	ENTPD3	O75355	529 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	SPDYE6	P0CI01	402 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	PBX1	P40424	430 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	ARHGAP25	P42331	645 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	FILIP1L	Q4L180	1135 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	GALNT17	Q6IS24	598 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	TATDN1	Q6P1N9	297 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	BCAS4	Q8TDM0	211 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	RRP36	Q96EU6	259 aa	Known RBP	13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	BORCS6	Q96GS4	357 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	CSRNP2	Q9H175	543 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	VPS33B	Q9H267	617 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	PIM2	Q9P1W9	311 aa		13.31	□□□□□ -0.28
SPG7-222	ENST00000569820	POLR2D	O15514	142 aa	Known RBP	13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	GYPC	P04921	128 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	SCP2	P22307	547 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	FECH	P22830	423 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	ATP2C1	P98194	919 aa	Predicted RBP	13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	PPFIA1	Q13136	1202 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	ZNF174	Q15697	407 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	SOGA3	Q5TF21	947 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	GDAP1L1	Q96MZ0	367 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	CTAGE1	Q96RT6	745 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	PIGS	Q96S52	555 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	UBA5	Q9GZZ9	404 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	ZMYND12	Q9H0C1	365 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	ADD3	Q9UEY8	706 aa	Known RBP	13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	PCDHA6	Q9UN73	950 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	PCDHA8	Q9Y5H6	950 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	TARSL2	A2RTX5	802 aa	Known RBP	13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	FXR1	P51114	621 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	INHBE	P58166	350 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	ZNF543	Q08ER8	600 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	USP49	Q70CQ1	688 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	TRAPPC11	Q7Z392	1133 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	FMNL3	Q8IVF7	1028 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	CAPS2	Q9BXY5	557 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	MTFR1L	Q9H019	292 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	SERTAD1	Q9UHV2	236 aa		13.3	□□□□□ -0.28
SPG7-222	ENST00000569820	ERVK-24	P63145	666 aa		13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	PTGDR	Q13258	359 aa		13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	CERKL	Q49MI3	558 aa	Predicted RBP	13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	SPATA1	Q5VX52	437 aa		13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	GBP6	Q6ZN66	633 aa		13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	GRAMD1C	Q8IYS0	662 aa		13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	FERMT2	Q96AC1	680 aa		13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	SELENOO	Q9BVL4	669 aa		13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	SEC63	Q9UGP8	760 aa	Known RBP	13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	SYNRG	Q9UMZ2	1314 aa		13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	GOLGA6B	A6NDN3	693 aa		13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	AGPS	O00116	658 aa		13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	EIF3H	O15372	352 aa	Known RBP eCLIP	13.29	□□□□□ -0.28	3e-7	■■■■■ 32.2
SPG7-222	ENST00000569820	NAPA	P54920	295 aa		13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	CYP26C1	Q6V0L0	522 aa		13.29	□□□□□ -0.28

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