RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 SGO2Q562F6 1265 aa9.86□□□□□ -0.83
CDH11-216ENST00000569128 BEND3Q5T5X7 828 aa9.86□□□□□ -0.83
CDH11-216ENST00000569128 LSRQ86X29 649 aaPredicted RBP9.86□□□□□ -0.83
CDH11-216ENST00000569128 CERS3Q8IU89 383 aa9.86□□□□□ -0.83
CDH11-216ENST00000569128 HID1Q8IV36 788 aa9.86□□□□□ -0.83
CDH11-216ENST00000569128 ITPRIPQ8IWB1 547 aa9.86□□□□□ -0.83
CDH11-216ENST00000569128 PLBD2Q8NHP8 589 aa9.86□□□□□ -0.83
CDH11-216ENST00000569128 FBLIM1Q8WUP2 373 aa9.86□□□□□ -0.83
CDH11-216ENST00000569128 UTP4Q969X6 686 aaKnown RBP9.86□□□□□ -0.83
CDH11-216ENST00000569128 MYD88Q99836 296 aa9.86□□□□□ -0.83
CDH11-216ENST00000569128 TJP2Q9UDY2 1190 aa9.86□□□□□ -0.83
CDH11-216ENST00000569128 MAP3K15Q6ZN16 1313 aa9.85□□□□□ -0.83
CDH11-216ENST00000569128 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.85□□□□□ -0.83
CDH11-216ENST00000569128 SLC22A31A6NKX4 558 aa9.85□□□□□ -0.83
CDH11-216ENST00000569128 CHURC1-FNTBB4DL54 471 aa9.85□□□□□ -0.83
CDH11-216ENST00000569128 CAMTA2O94983 1202 aa9.85□□□□□ -0.83
CDH11-216ENST00000569128 DDX58O95786 925 aaKnown RBP9.85□□□□□ -0.83
CDH11-216ENST00000569128 IGKV5-2P06315 115 aa9.85□□□□□ -0.83
CDH11-216ENST00000569128 MVPQ14764 893 aaKnown RBP9.85□□□□□ -0.83
CDH11-216ENST00000569128 LRRFIP1Q32MZ4 808 aaKnown RBP9.85□□□□□ -0.83
CDH11-216ENST00000569128 INTS3Q68E01 1043 aaKnown RBP9.85□□□□□ -0.83
CDH11-216ENST00000569128 OVOS1Q6IE37 1185 aa9.85□□□□□ -0.83
CDH11-216ENST00000569128 KIF6Q6ZMV9 814 aa9.85□□□□□ -0.83
CDH11-216ENST00000569128 RUFY4Q6ZNE9 571 aa9.85□□□□□ -0.83
CDH11-216ENST00000569128 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.85□□□□□ -0.83
CDH11-216ENST00000569128 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.85□□□□□ -0.83
CDH11-216ENST00000569128 RBBP8NLQ8NC74 664 aaPredicted RBP9.85□□□□□ -0.83
CDH11-216ENST00000569128 HNRNPLLQ8WVV9 542 aaKnown RBP9.85□□□□□ -0.83
CDH11-216ENST00000569128 TMEM40Q8WWA1 233 aa9.85□□□□□ -0.83
CDH11-216ENST00000569128 TMEM87BQ96K49 555 aa9.85□□□□□ -0.83
CDH11-216ENST00000569128 METTL22Q9BUU2 404 aaPredicted RBP9.85□□□□□ -0.83
CDH11-216ENST00000569128 ACSS3Q9H6R3 686 aa9.85□□□□□ -0.83
CDH11-216ENST00000569128 GMIPQ9P107 970 aa9.85□□□□□ -0.83
CDH11-216ENST00000569128 PRKAG3Q9UGI9 489 aa9.85□□□□□ -0.83
CDH11-216ENST00000569128 R3HCC1Q9Y3T6 440 aaKnown RBP9.85□□□□□ -0.83
CDH11-216ENST00000569128 COL15A1P39059 1388 aa9.85□□□□□ -0.83
CDH11-216ENST00000569128 UPK3BL1B0FP48 263 aa9.84□□□□□ -0.83
CDH11-216ENST00000569128 UPK3BL2E5RIL1 263 aa9.84□□□□□ -0.83
CDH11-216ENST00000569128 SMAD7O15105 426 aaKnown RBP9.84□□□□□ -0.83
CDH11-216ENST00000569128 CDC45O75419 566 aa9.84□□□□□ -0.83
CDH11-216ENST00000569128 BMP3P12645 472 aa9.84□□□□□ -0.83
CDH11-216ENST00000569128 MCATQ8IVS2 390 aaKnown RBP9.84□□□□□ -0.83
CDH11-216ENST00000569128 ARMC10Q8N2F6 343 aa9.84□□□□□ -0.83
CDH11-216ENST00000569128 KCT2Q8NC54 265 aa9.84□□□□□ -0.83
CDH11-216ENST00000569128 FAM13CQ8NE31 585 aa9.84□□□□□ -0.83
CDH11-216ENST00000569128 DPH2Q9BQC3 489 aaPredicted RBP9.84□□□□□ -0.83
CDH11-216ENST00000569128 DAGLAQ9Y4D2 1042 aa9.84□□□□□ -0.83
CDH11-216ENST00000569128 NUP188Q5SRE5 1749 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 FAM221BA6H8Z2 402 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 MEIS3P2A8K0S8 358 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 NFICP08651 508 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 GPTP24298 496 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 CCT4P50991 539 aaKnown RBP9.83□□□□□ -0.84
CDH11-216ENST00000569128 CHMP4BP1P59074 171 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 TCIRG1Q13488 830 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 UVSSAQ2YD98 709 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 ARSHQ5FYA8 562 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 COL23A1Q86Y22 540 aaPredicted RBP9.83□□□□□ -0.84
CDH11-216ENST00000569128 MRPL41Q8IXM3 137 aaKnown RBP9.83□□□□□ -0.84
CDH11-216ENST00000569128 OR6P1Q8NGX9 317 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 ATG4CQ96DT6 458 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 MYRFLQ96LU7 910 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 MEIS3Q99687 375 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 TFCP2L1Q9NZI6 479 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 PCOLCE2Q9UKZ9 415 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 SUGT1Q9Y2Z0 365 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 RGPD3A6NKT7 1758 aaPredicted RBP9.83□□□□□ -0.84
CDH11-216ENST00000569128 RGPD4Q7Z3J3 1758 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 ARFGEF2Q9Y6D5 1785 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 UBR3Q6ZT12 1888 aa9.83□□□□□ -0.84
CDH11-216ENST00000569128 A0A087WZG4 1122 aa9.82□□□□□ -0.84
CDH11-216ENST00000569128 ERVV-1B6SEH8 477 aa9.82□□□□□ -0.84
CDH11-216ENST00000569128 PARNO95453 639 aaKnown RBP9.82□□□□□ -0.84
CDH11-216ENST00000569128 RFC4P35249 363 aa9.82□□□□□ -0.84
CDH11-216ENST00000569128 RASSF7Q02833 373 aa9.82□□□□□ -0.84
CDH11-216ENST00000569128 SLBPQ14493 270 aaKnown RBP eCLIP9.82□□□□□ -0.84
CDH11-216ENST00000569128 SLC15A2Q16348 729 aa9.82□□□□□ -0.84
CDH11-216ENST00000569128 SLC6A19Q695T7 634 aa9.82□□□□□ -0.84
CDH11-216ENST00000569128 DHX37Q8IY37 1157 aaKnown RBP9.82□□□□□ -0.84
CDH11-216ENST00000569128 RPUSD2Q8IZ73 545 aaKnown RBP9.82□□□□□ -0.84
CDH11-216ENST00000569128 LINS1Q8NG48 757 aa9.82□□□□□ -0.84
CDH11-216ENST00000569128 SH3TC2Q8TF17 1288 aa9.82□□□□□ -0.84
CDH11-216ENST00000569128 ISCA1Q9BUE6 129 aa9.82□□□□□ -0.84
CDH11-216ENST00000569128 YIPF2Q9BWQ6 316 aa9.82□□□□□ -0.84
CDH11-216ENST00000569128 PDGFDQ9GZP0 370 aaPredicted RBP9.82□□□□□ -0.84
CDH11-216ENST00000569128 USP44Q9H0E7 712 aa9.82□□□□□ -0.84
CDH11-216ENST00000569128 SEMA6CQ9H3T2 930 aa9.82□□□□□ -0.84
CDH11-216ENST00000569128 NARFQ9UHQ1 456 aa9.82□□□□□ -0.84
CDH11-216ENST00000569128 TUBGCP6Q96RT7 1819 aa9.82□□□□□ -0.84
CDH11-216ENST00000569128 PNPLA7Q6ZV29 1317 aa9.82□□□□□ -0.84
CDH11-216ENST00000569128 NBPF7P0C2Y1 421 aaPredicted RBP9.81□□□□□ -0.84
CDH11-216ENST00000569128 MAP4P27816 1152 aaKnown RBP9.81□□□□□ -0.84
CDH11-216ENST00000569128 YARSP54577 528 aaKnown RBP9.81□□□□□ -0.84
CDH11-216ENST00000569128 PLEKHG6Q3KR16 790 aa9.81□□□□□ -0.84
CDH11-216ENST00000569128 TNNI3KQ59H18 835 aa9.81□□□□□ -0.84
CDH11-216ENST00000569128 PRAMEF13Q5VWM6 474 aa9.81□□□□□ -0.84
CDH11-216ENST00000569128 TBC1D9BQ66K14 1250 aa9.81□□□□□ -0.84
CDH11-216ENST00000569128 NLRC3Q7RTR2 1065 aa9.81□□□□□ -0.84
CDH11-216ENST00000569128 ZNF34Q8IZ26 560 aa9.81□□□□□ -0.84
CDH11-216ENST00000569128 SYNE4Q8N205 404 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms