RNA–Protein interactions for RNA: ENST00000568459.5

PKM-220, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 1,806 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-220ENST00000568459 CAPN11Q9UMQ6 739 aa16.15■□□□□ 0.18
PKM-220ENST00000568459 ZBTB48P10074 688 aaPredicted RBP16.15■□□□□ 0.18
PKM-220ENST00000568459 PPP1R2P41236 205 aa16.15■□□□□ 0.18
PKM-220ENST00000568459 INHBEP58166 350 aa16.15■□□□□ 0.18
PKM-220ENST00000568459 PTGDRQ13258 359 aa16.15■□□□□ 0.18
PKM-220ENST00000568459 NOM1Q5C9Z4 860 aaKnown RBP16.15■□□□□ 0.18
PKM-220ENST00000568459 IFIT1BQ5T764 474 aaKnown RBP16.15■□□□□ 0.18
PKM-220ENST00000568459 CCDC170Q8IYT3 715 aa16.15■□□□□ 0.18
PKM-220ENST00000568459 ENAHQ8N8S7 591 aaPredicted RBP16.15■□□□□ 0.18
PKM-220ENST00000568459 WNK4Q96J92 1243 aa16.15■□□□□ 0.18
PKM-220ENST00000568459 ZSWIM4Q9H7M6 989 aa16.15■□□□□ 0.18
PKM-220ENST00000568459 EFCC1Q9HA90 598 aa16.15■□□□□ 0.18
PKM-220ENST00000568459 MANSC4A6NHS7 340 aaPredicted RBP16.14■□□□□ 0.17
PKM-220ENST00000568459 LGALS16A8MUM7 142 aa16.14■□□□□ 0.17
PKM-220ENST00000568459 RPN1P04843 607 aaKnown RBP16.14■□□□□ 0.17
PKM-220ENST00000568459 CDK17Q00537 523 aa16.14■□□□□ 0.17
PKM-220ENST00000568459 ITIH3Q06033 890 aa16.14■□□□□ 0.17
PKM-220ENST00000568459 EARS2Q5JPH6 523 aaKnown RBP16.14■□□□□ 0.17
PKM-220ENST00000568459 ZNF507Q8TCN5 953 aa16.14■□□□□ 0.17
PKM-220ENST00000568459 FAM151AQ8WW52 585 aa16.14■□□□□ 0.17
PKM-220ENST00000568459 NELFBQ8WX92 580 aa16.14■□□□□ 0.17
PKM-220ENST00000568459 MAGEF1Q9HAY2 307 aa16.14■□□□□ 0.17
PKM-220ENST00000568459 SH3GLB2Q9NR46 395 aa16.14■□□□□ 0.17
PKM-220ENST00000568459 CNTNAP5Q8WYK1 1306 aa16.13■□□□□ 0.17
PKM-220ENST00000568459 ATP2B1P20020 1258 aa16.13■□□□□ 0.17
PKM-220ENST00000568459 CALML3P27482 149 aa16.13■□□□□ 0.17
PKM-220ENST00000568459 TSR1Q2NL82 804 aaKnown RBP16.13■□□□□ 0.17
PKM-220ENST00000568459 WWC2Q6AWC2 1192 aa16.13■□□□□ 0.17
PKM-220ENST00000568459 IQCEQ6IPM2 695 aa16.13■□□□□ 0.17
PKM-220ENST00000568459 ADSSL1Q8N142 457 aa16.13■□□□□ 0.17
PKM-220ENST00000568459 CCDC82Q8N4S0 544 aa16.13■□□□□ 0.17
PKM-220ENST00000568459 MB21D1Q8N884 522 aa16.13■□□□□ 0.17
PKM-220ENST00000568459 FAM163AQ96GL9 167 aaPredicted RBP16.13■□□□□ 0.17
PKM-220ENST00000568459 LUC7L2Q9Y383 392 aaKnown RBP16.13■□□□□ 0.17
PKM-220ENST00000568459 CSADQ9Y600 493 aa16.13■□□□□ 0.17
PKM-220ENST00000568459 SAR1BQ9Y6B6 198 aa16.13■□□□□ 0.17
PKM-220ENST00000568459 OTOFQ9HC10 1997 aa16.13■□□□□ 0.17
PKM-220ENST00000568459 MYH8P13535 1937 aa16.13■□□□□ 0.17
PKM-220ENST00000568459 MAGEB6P1A0A0J9YX57 407 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 A0A0U1RQJ8 604 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 KRT86O43790 486 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 ORC4O43929 436 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 CCT6AP40227 531 aaKnown RBP16.12■□□□□ 0.17
PKM-220ENST00000568459 DNM2P50570 870 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 TCP10Q12799 353 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 FIGNQ5HY92 759 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 DCAF15Q66K64 600 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 ATRIPQ8WXE1 791 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 CUEDC2Q9H467 287 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 ELP3Q9H9T3 547 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 LRP2BPQ9P2M1 347 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 FAN1Q9Y2M0 1017 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 REXO2Q9Y3B8 237 aaKnown RBP16.12■□□□□ 0.17
PKM-220ENST00000568459 RRP15Q9Y3B9 282 aaKnown RBP16.12■□□□□ 0.17
PKM-220ENST00000568459 V9GY48 417 aaPredicted RBP16.12■□□□□ 0.17
PKM-220ENST00000568459 FAM205CA6NFA0 338 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 LDHCP07864 332 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 RHOXF2BP0C7M4 288 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 HOXA7P31268 230 aaPredicted RBP16.12■□□□□ 0.17
PKM-220ENST00000568459 CYLC1P35663 651 aaPredicted RBP16.12■□□□□ 0.17
PKM-220ENST00000568459 GSTO1P78417 241 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 MECOMQ03112 1051 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 STIM1Q13586 685 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 ZNF174Q15697 407 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.12■□□□□ 0.17
PKM-220ENST00000568459 CMTR1Q8N1G2 835 aaKnown RBP16.12■□□□□ 0.17
PKM-220ENST00000568459 GOLGA6L1Q8N7Z2 621 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 MTRQ99707 1265 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 RHOXF2Q9BQY4 288 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 RIOK1Q9BRS2 568 aaKnown RBP16.12■□□□□ 0.17
PKM-220ENST00000568459 VPS16Q9H269 839 aa16.12■□□□□ 0.17
PKM-220ENST00000568459 GAKO14976 1311 aa16.11■□□□□ 0.17
PKM-220ENST00000568459 LAD1O00515 517 aa16.11■□□□□ 0.17
PKM-220ENST00000568459 ALDH1A1P00352 501 aa16.11■□□□□ 0.17
PKM-220ENST00000568459 PARP1P09874 1014 aaKnown RBP16.11■□□□□ 0.17
PKM-220ENST00000568459 SCG2P13521 617 aa16.11■□□□□ 0.17
PKM-220ENST00000568459 CYP7A1P22680 504 aa16.11■□□□□ 0.17
PKM-220ENST00000568459 UBXN1Q04323 297 aa16.11■□□□□ 0.17
PKM-220ENST00000568459 PFKFB3Q16875 520 aaPredicted RBP16.11■□□□□ 0.17
PKM-220ENST00000568459 ZNF572Q7Z3I7 529 aaPredicted RBP16.11■□□□□ 0.17
PKM-220ENST00000568459 SMYD4Q8IYR2 804 aaPredicted RBP16.11■□□□□ 0.17
PKM-220ENST00000568459 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.11■□□□□ 0.175e-46■□□□□ 8.9
PKM-220ENST00000568459 PURBQ96QR8 312 aaKnown RBP16.11■□□□□ 0.17
PKM-220ENST00000568459 SLF1Q9BQI6 1058 aa16.11■□□□□ 0.17
PKM-220ENST00000568459 A0A1W2PQJ5 194 aa16.1■□□□□ 0.17
PKM-220ENST00000568459 LRRIQ3A6PVS8 624 aaPredicted RBP16.1■□□□□ 0.17
PKM-220ENST00000568459 EIF3CLB5ME19 914 aaKnown RBP16.1■□□□□ 0.17
PKM-220ENST00000568459 PRPF6O94906 941 aaKnown RBP16.1■□□□□ 0.17
PKM-220ENST00000568459 RHOBTB3O94955 611 aa16.1■□□□□ 0.17
PKM-220ENST00000568459 PRLRP16471 622 aa16.1■□□□□ 0.17
PKM-220ENST00000568459 NFIAQ12857 509 aa16.1■□□□□ 0.17
PKM-220ENST00000568459 VGLL4Q14135 290 aa16.1■□□□□ 0.17
PKM-220ENST00000568459 COBLL1Q53SF7 1204 aa16.1■□□□□ 0.17
PKM-220ENST00000568459 GALNT17Q6IS24 598 aa16.1■□□□□ 0.17
PKM-220ENST00000568459 IRF2BP1Q8IU81 584 aa16.1■□□□□ 0.17
PKM-220ENST00000568459 NOA1Q8NC60 698 aaKnown RBP16.1■□□□□ 0.17
PKM-220ENST00000568459 COG1Q8WTW3 980 aa16.1■□□□□ 0.17
PKM-220ENST00000568459 OPTNQ96CV9 577 aa16.1■□□□□ 0.17
PKM-220ENST00000568459 DHTKD1Q96HY7 919 aaPredicted RBP16.1■□□□□ 0.17
PKM-220ENST00000568459 EIF3CQ99613 913 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms