RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 KDM5DQ9BY66 1539 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 GDF11O95390 407 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 EEF1GP26641 437 aaKnown RBP14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 ADORA1P30542 326 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 LRRC41Q15345 812 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 MIS18BP1Q6P0N0 1132 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 MAGOHBQ96A72 148 aaKnown RBP14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 TUBGCP2Q9BSJ2 902 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 PCIF1Q9H4Z3 704 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 UBN1Q9NPG3 1134 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 SEMA3EO15041 775 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 SLC16A2P36021 539 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 C7orf31Q8N865 590 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 IL17REQ8NFR9 667 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 SPDYE1Q8NFV5 336 aaPredicted RBP14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 PI4K2BQ8TCG2 481 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 MICAL1Q8TDZ2 1067 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 NACC1Q96RE7 527 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 Q9H521 79 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 XDHP47989 1333 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 MAPK4P31152 587 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 PSMC2P35998 433 aaKnown RBP14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 SNX1Q13596 522 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 ZNF653Q96CK0 615 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 CCDC17Q96LX7 622 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 CPSF3Q9UKF6 684 aaKnown RBP14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 FAN1Q9Y2M0 1017 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 ZCCHC11Q5TAX3 1644 aaKnown RBP14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 MAP3K15Q6ZN16 1313 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 GSPT1P15170 499 aaKnown RBP14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 INPP1P49441 399 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 ADCY1Q08828 1119 aa14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 PUS3Q9BZE2 481 aaKnown RBP14.79□□□□□ -0.04
CX3CL1-204ENST00000565912 UGGT1Q9NYU2 1555 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 RBM6P78332 1123 aaKnown RBP14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 LMNB2Q03252 620 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 GPATCH4Q5T3I0 446 aaKnown RBP14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 TTC19Q6DKK2 380 aaPredicted RBP14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 DNAAF3Q8N9W5 541 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 JPH2Q9BR39 696 aaPredicted RBP14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 KIAA0232Q92628 1395 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 PLEKHG1Q9ULL1 1385 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 PDE8BO95263 885 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 MX2P20592 715 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 CASP14P31944 242 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 TFAMQ00059 246 aaKnown RBP14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 ARHGEF6Q15052 776 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 ZSCAN26Q16670 478 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 ACCSQ96QU6 501 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 ZSCAN20P17040 1043 aaPredicted RBP14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 SCRN1Q12765 414 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 UBE3CQ15386 1083 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 ASPRV1Q53RT3 343 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 ZNF449Q6P9G9 518 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 WHAMMQ8TF30 809 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 IRAK4Q9NWZ3 460 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 PCDHA4Q9UN74 947 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 TTLL1O95922 423 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 CRKLP46109 303 aaKnown RBP14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 USP14P54578 494 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 STX1BP61266 288 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 DYNLT1P63172 113 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 RCN2Q14257 317 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 FAM186BQ8IYM0 893 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 SLC17A8Q8NDX2 589 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 NLRP7Q8WX94 980 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 CEP170P1Q96L14 293 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 ABCF3Q9NUQ8 709 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 SLC12A6Q9UHW9 1150 aa14.78□□□□□ -0.04
CX3CL1-204ENST00000565912 LOC102724428A0A0B4J2F2 783 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 CLIC2O15247 247 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 IFNAR2P48551 515 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 SIK1P57059 783 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 ZBTB33Q86T24 672 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 BCAS4Q8TDM0 211 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 PPP1R16BQ96T49 567 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 DBNDD1Q9H9R9 158 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 IFT122Q9HBG6 1241 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 ADD3Q9UEY8 706 aaKnown RBP14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 PRKAG2Q9UGJ0 569 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 TMEM94Q12767 1356 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 LRRN2O75325 713 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 LRRC8AQ8IWT6 810 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 STAG1Q8WVM7 1258 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 BCL2L12Q9HB09 334 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 NXF1Q9UBU9 619 aaKnown RBP14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 HEXIM1O94992 359 aaKnown RBP14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 CPP00450 1065 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 MYCP01106 439 aaPredicted RBP14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 DYNLL1P63167 89 aaKnown RBP14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 KCTD16Q68DU8 428 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 EEPD1Q7L9B9 569 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 EXOC8Q8IYI6 725 aa14.77□□□□□ -0.04
CX3CL1-204ENST00000565912 AFPP02771 609 aaKnown RBP14.77□□□□□ -0.05
CX3CL1-204ENST00000565912 CLTAP09496 248 aa14.77□□□□□ -0.05
CX3CL1-204ENST00000565912 PCP11498 1178 aaKnown RBP14.77□□□□□ -0.05
CX3CL1-204ENST00000565912 LLGL1Q15334 1064 aa14.77□□□□□ -0.05
CX3CL1-204ENST00000565912 PSPC1Q8WXF1 523 aaKnown RBP14.77□□□□□ -0.05
CX3CL1-204ENST00000565912 RUNDC3BQ96NL0 473 aa14.77□□□□□ -0.05
CX3CL1-204ENST00000565912 FIS1Q9Y3D6 152 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms