RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 DHX40Q8IX18 779 aaKnown RBP17.49■□□□□ 0.39
COMMD4-210ENST00000564587 ETNPPLQ8TBG4 499 aa17.49■□□□□ 0.39
COMMD4-210ENST00000564587 P2RX7Q99572 595 aaKnown RBP17.49■□□□□ 0.39
COMMD4-210ENST00000564587 SMCHD1A6NHR9 2005 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 SPDYE5A6NIY4 337 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 PP2D1A8MPX8 630 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 MYL5Q02045 173 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 KCNB1Q14721 858 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 NAALADL2Q58DX5 795 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 XRRA1Q6P2D8 792 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 SV2BQ7L1I2 683 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 NIPA1Q7RTP0 329 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 GRAMD1CQ8IYS0 662 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 TNS4Q8IZW8 715 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 AOPEPQ8N6M6 819 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 DNAJC5GQ8N7S2 189 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 MB21D1Q8N884 522 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 REPS2Q8NFH8 660 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 SNX29Q8TEQ0 813 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 ATG4CQ96DT6 458 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 TRERF1Q96PN7 1200 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 MMTAG2Q9BU76 263 aaKnown RBP17.48■□□□□ 0.39
COMMD4-210ENST00000564587 FZD1Q9UP38 647 aa17.48■□□□□ 0.39
COMMD4-210ENST00000564587 RPTORQ8N122 1335 aa17.47■□□□□ 0.39
COMMD4-210ENST00000564587 PPP1R2P41236 205 aa17.47■□□□□ 0.39
COMMD4-210ENST00000564587 PLCB2Q00722 1185 aa17.47■□□□□ 0.39
COMMD4-210ENST00000564587 PABPC4Q13310 644 aaKnown RBP eCLIP17.47■□□□□ 0.39
COMMD4-210ENST00000564587 PPIL2Q13356 520 aa17.47■□□□□ 0.39
COMMD4-210ENST00000564587 CEP55Q53EZ4 464 aa17.47■□□□□ 0.39
COMMD4-210ENST00000564587 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.47■□□□□ 0.39
COMMD4-210ENST00000564587 TBC1D5Q92609 795 aa17.47■□□□□ 0.39
COMMD4-210ENST00000564587 LENG9Q96B70 501 aa17.47■□□□□ 0.39
COMMD4-210ENST00000564587 C7orf25Q9BPX7 421 aa17.47■□□□□ 0.39
COMMD4-210ENST00000564587 TEX13BQ9BXU2 312 aa17.47■□□□□ 0.39
COMMD4-210ENST00000564587 RBBP6Q7Z6E9 1792 aaKnown RBP17.47■□□□□ 0.39
COMMD4-210ENST00000564587 OTOFQ9HC10 1997 aa17.47■□□□□ 0.39
COMMD4-210ENST00000564587 RLFQ13129 1914 aa17.47■□□□□ 0.39
COMMD4-210ENST00000564587 A0A0G2JLL6 359 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-210ENST00000564587 GOLGA6L6A8MZA4 724 aa17.46■□□□□ 0.39
COMMD4-210ENST00000564587 FAM86B1E9PN63 330 aa17.46■□□□□ 0.39
COMMD4-210ENST00000564587 KIF3CO14782 793 aa17.46■□□□□ 0.39
COMMD4-210ENST00000564587 RPN1P04843 607 aaKnown RBP17.46■□□□□ 0.39
COMMD4-210ENST00000564587 TPM3P06753 285 aa17.46■□□□□ 0.39
COMMD4-210ENST00000564587 FAM86B2P0C5J1 330 aa17.46■□□□□ 0.39
COMMD4-210ENST00000564587 BCRP11274 1271 aa17.46■□□□□ 0.39
COMMD4-210ENST00000564587 GRB10Q13322 594 aa17.46■□□□□ 0.39
COMMD4-210ENST00000564587 DGKZQ13574 1117 aa17.46■□□□□ 0.39
COMMD4-210ENST00000564587 TMEM119Q4V9L6 283 aa17.46■□□□□ 0.39
COMMD4-210ENST00000564587 RNF207Q6ZRF8 634 aa17.46■□□□□ 0.39
COMMD4-210ENST00000564587 FASTKD5Q7L8L6 764 aaKnown RBP17.46■□□□□ 0.39
COMMD4-210ENST00000564587 PRRT2Q7Z6L0 340 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-210ENST00000564587 PLA2G4DQ86XP0 818 aa17.46■□□□□ 0.39
COMMD4-210ENST00000564587 ENOX1Q8TC92 643 aaKnown RBP17.46■□□□□ 0.39
COMMD4-210ENST00000564587 TRIM5Q9C035 493 aa17.46■□□□□ 0.39
COMMD4-210ENST00000564587 RNF146Q9NTX7 359 aa17.46■□□□□ 0.39
COMMD4-210ENST00000564587 KCNH4Q9UQ05 1017 aa17.46■□□□□ 0.39
COMMD4-210ENST00000564587 CLEC11AQ9Y240 323 aa17.46■□□□□ 0.39
COMMD4-210ENST00000564587 FRMPD4Q14CM0 1322 aa17.46■□□□□ 0.38
COMMD4-210ENST00000564587 PTPRFP10586 1907 aa17.45■□□□□ 0.38
COMMD4-210ENST00000564587 IGLV3-22A0A075B6J6 115 aa17.45■□□□□ 0.38
COMMD4-210ENST00000564587 POTEMA6NI47 508 aa17.45■□□□□ 0.38
COMMD4-210ENST00000564587 POTECB2RU33 542 aa17.45■□□□□ 0.38
COMMD4-210ENST00000564587 MEIS1O00470 390 aa17.45■□□□□ 0.38
COMMD4-210ENST00000564587 NFIBO00712 420 aa17.45■□□□□ 0.38
COMMD4-210ENST00000564587 MSH4O15457 936 aa17.45■□□□□ 0.38
COMMD4-210ENST00000564587 TAL1P17542 331 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-210ENST00000564587 MUTP22033 750 aa17.45■□□□□ 0.38
COMMD4-210ENST00000564587 CCT6AP40227 531 aaKnown RBP17.45■□□□□ 0.38
COMMD4-210ENST00000564587 FKBP1BP68106 108 aa17.45■□□□□ 0.38
COMMD4-210ENST00000564587 CUL4BQ13620 913 aa17.45■□□□□ 0.38
COMMD4-210ENST00000564587 ZNF658Q5TYW1 1059 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-210ENST00000564587 PCNX4Q63HM2 1172 aa17.45■□□□□ 0.38
COMMD4-210ENST00000564587 ISM2Q6H9L7 571 aa17.45■□□□□ 0.38
COMMD4-210ENST00000564587 SNRNP48Q6IEG0 339 aaKnown RBP17.45■□□□□ 0.38
COMMD4-210ENST00000564587 CNNM4Q6P4Q7 775 aa17.45■□□□□ 0.38
COMMD4-210ENST00000564587 SYTL5Q8TDW5 730 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-210ENST00000564587 LARP4BQ92615 738 aaKnown RBP17.45■□□□□ 0.38
COMMD4-210ENST00000564587 MTRQ99707 1265 aa17.45■□□□□ 0.38
COMMD4-210ENST00000564587 MXRA8Q9BRK3 442 aa17.45■□□□□ 0.38
COMMD4-210ENST00000564587 WDR11Q9BZH6 1224 aa17.45■□□□□ 0.38
COMMD4-210ENST00000564587 ELP3Q9H9T3 547 aa17.45■□□□□ 0.38
COMMD4-210ENST00000564587 LOC285556D6RIA3 1793 aa17.44■□□□□ 0.38
COMMD4-210ENST00000564587 A0A087WWV3 80 aa17.44■□□□□ 0.38
COMMD4-210ENST00000564587 SPDYE16A6NNV3 312 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-210ENST00000564587 CDC25BP30305 580 aa17.44■□□□□ 0.38
COMMD4-210ENST00000564587 COPB2P35606 906 aa17.44■□□□□ 0.38
COMMD4-210ENST00000564587 STAT3P40763 770 aa17.44■□□□□ 0.38
COMMD4-210ENST00000564587 LDLRAD1Q5T700 205 aa17.44■□□□□ 0.38
COMMD4-210ENST00000564587 LBX2Q6XYB7 198 aa17.44■□□□□ 0.38
COMMD4-210ENST00000564587 CHST13Q8NET6 341 aa17.44■□□□□ 0.38
COMMD4-210ENST00000564587 RAD54LQ92698 747 aa17.44■□□□□ 0.38
COMMD4-210ENST00000564587 SLC5A5Q92911 643 aa17.44■□□□□ 0.38
COMMD4-210ENST00000564587 MRFAP1L1Q96HT8 127 aa17.44■□□□□ 0.38
COMMD4-210ENST00000564587 PNMA5Q96PV4 448 aa17.44■□□□□ 0.38
COMMD4-210ENST00000564587 RIT2Q99578 217 aa17.44■□□□□ 0.38
COMMD4-210ENST00000564587 ACAD9Q9H845 621 aa17.44■□□□□ 0.38
COMMD4-210ENST00000564587 BMP2KQ9NSY1 1161 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-210ENST00000564587 FBXO40Q9UH90 709 aa17.44■□□□□ 0.38
COMMD4-210ENST00000564587 ZNF214Q9UL59 606 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-210ENST00000564587 PVALEFA0A1B0GWK0 134 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms