RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 CD4P01730 458 aa14.67□□□□□ -0.06
HERC2-206ENST00000564519 MYCLP12524 364 aaPredicted RBP14.67□□□□□ -0.06
HERC2-206ENST00000564519 CPA1P15085 419 aa14.67□□□□□ -0.06
HERC2-206ENST00000564519 SMARCA1P28370 1054 aa14.67□□□□□ -0.06
HERC2-206ENST00000564519 CPT1AP50416 773 aa14.67□□□□□ -0.06
HERC2-206ENST00000564519 PPIGQ13427 754 aaKnown RBP eCLIP14.67□□□□□ -0.06
HERC2-206ENST00000564519 PGM5Q15124 567 aa14.67□□□□□ -0.06
HERC2-206ENST00000564519 FCHSD1Q86WN1 690 aa14.67□□□□□ -0.06
HERC2-206ENST00000564519 CCDC82Q8N4S0 544 aa14.67□□□□□ -0.06
HERC2-206ENST00000564519 FANCBQ8NB91 859 aa14.67□□□□□ -0.06
HERC2-206ENST00000564519 KCNB2Q92953 911 aa14.67□□□□□ -0.06
HERC2-206ENST00000564519 RRP36Q96EU6 259 aaKnown RBP14.67□□□□□ -0.06
HERC2-206ENST00000564519 LZTS2Q9BRK4 669 aa14.67□□□□□ -0.06
HERC2-206ENST00000564519 MAP3K20Q9NYL2 800 aaKnown RBP14.67□□□□□ -0.06
HERC2-206ENST00000564519 DDX41Q9UJV9 622 aaKnown RBP14.67□□□□□ -0.06
HERC2-206ENST00000564519 A6NJR5 290 aa14.66□□□□□ -0.06
HERC2-206ENST00000564519 TLR3O15455 904 aaKnown RBP14.66□□□□□ -0.06
HERC2-206ENST00000564519 TIMP1P01033 207 aa14.66□□□□□ -0.06
HERC2-206ENST00000564519 CALM1P0DP23 149 aa14.66□□□□□ -0.06
HERC2-206ENST00000564519 CALM2P0DP24 149 aa14.66□□□□□ -0.06
HERC2-206ENST00000564519 CALM3P0DP25 149 aa14.66□□□□□ -0.06
HERC2-206ENST00000564519 HSPA4P34932 840 aa14.66□□□□□ -0.06
HERC2-206ENST00000564519 GNAQP50148 359 aa14.66□□□□□ -0.06
HERC2-206ENST00000564519 ARHGAP1Q07960 439 aa14.66□□□□□ -0.06
HERC2-206ENST00000564519 TMTC3Q6ZXV5 915 aa14.66□□□□□ -0.06
HERC2-206ENST00000564519 VSIG10LQ86VR7 867 aa14.66□□□□□ -0.06
HERC2-206ENST00000564519 AFG1LQ8WV93 481 aa14.66□□□□□ -0.06
HERC2-206ENST00000564519 PPP1R12CQ9BZL4 782 aa14.66□□□□□ -0.06
HERC2-206ENST00000564519 TRPV6Q9H1D0 765 aa14.66□□□□□ -0.06
HERC2-206ENST00000564519 POLR3EQ9NVU0 708 aa14.66□□□□□ -0.06
HERC2-206ENST00000564519 SNX14Q9Y5W7 946 aa14.66□□□□□ -0.06
HERC2-206ENST00000564519 B4GALT4O60513 344 aa14.65□□□□□ -0.06
HERC2-206ENST00000564519 DNAJB2P25686 324 aa14.65□□□□□ -0.06
HERC2-206ENST00000564519 TRAF1Q13077 416 aa14.65□□□□□ -0.06
HERC2-206ENST00000564519 KRT32Q14532 448 aa14.65□□□□□ -0.06
HERC2-206ENST00000564519 APOA5Q6Q788 366 aa14.65□□□□□ -0.06
HERC2-206ENST00000564519 USP17L6PQ6QN14 398 aa14.65□□□□□ -0.06
HERC2-206ENST00000564519 TMEM199Q8N511 208 aa14.65□□□□□ -0.06
HERC2-206ENST00000564519 SAMD3Q8N6K7 520 aa14.65□□□□□ -0.06
HERC2-206ENST00000564519 GPKOWQ92917 476 aaPredicted RBP eCLIP14.65□□□□□ -0.06
HERC2-206ENST00000564519 TIFAQ96CG3 184 aa14.65□□□□□ -0.06
HERC2-206ENST00000564519 MTG1Q9BT17 334 aaPredicted RBP14.65□□□□□ -0.06
HERC2-206ENST00000564519 TRMT13Q9NUP7 481 aaKnown RBP14.65□□□□□ -0.06
HERC2-206ENST00000564519 SEC63Q9UGP8 760 aaKnown RBP14.65□□□□□ -0.06
HERC2-206ENST00000564519 MRVI1Q9Y6F6 885 aa14.65□□□□□ -0.06
HERC2-206ENST00000564519 UMODL1Q5DID0 1318 aa14.65□□□□□ -0.06
HERC2-206ENST00000564519 MEIS2O14770 477 aa14.64□□□□□ -0.07
HERC2-206ENST00000564519 SORBS3O60504 671 aa14.64□□□□□ -0.07
HERC2-206ENST00000564519 GH1P01241 217 aa14.64□□□□□ -0.07
HERC2-206ENST00000564519 MMP3P08254 477 aa14.64□□□□□ -0.07
HERC2-206ENST00000564519 CYP2C18P33260 490 aa14.64□□□□□ -0.07
HERC2-206ENST00000564519 SP2Q02086 613 aa14.64□□□□□ -0.07
HERC2-206ENST00000564519 MFSD5Q6N075 450 aa14.64□□□□□ -0.07
HERC2-206ENST00000564519 JAKMIP1Q96N16 626 aaKnown RBP14.64□□□□□ -0.07
HERC2-206ENST00000564519 GAS2L1Q99501 681 aaPredicted RBP14.64□□□□□ -0.07
HERC2-206ENST00000564519 ALDH8A1Q9H2A2 487 aaPredicted RBP14.64□□□□□ -0.07
HERC2-206ENST00000564519 PPP4R2Q9NY27 417 aa14.64□□□□□ -0.07
HERC2-206ENST00000564519 FRMPD4Q14CM0 1322 aa14.64□□□□□ -0.07
HERC2-206ENST00000564519 CNTNAP5Q8WYK1 1306 aa14.64□□□□□ -0.07
HERC2-206ENST00000564519 KLF18A0A0U1RQI7 1052 aa14.63□□□□□ -0.07
HERC2-206ENST00000564519 ZBTB43O43298 467 aa14.63□□□□□ -0.07
HERC2-206ENST00000564519 CSF2RAP15509 400 aa14.63□□□□□ -0.07
HERC2-206ENST00000564519 CCND2P30279 289 aa14.63□□□□□ -0.07
HERC2-206ENST00000564519 MRPS9P82933 396 aaKnown RBP14.63□□□□□ -0.07
HERC2-206ENST00000564519 FUT2Q10981 343 aa14.63□□□□□ -0.07
HERC2-206ENST00000564519 NBPF20Q3BBV1 942 aa14.63□□□□□ -0.07
HERC2-206ENST00000564519 BRDTQ58F21 947 aaPredicted RBP14.63□□□□□ -0.07
HERC2-206ENST00000564519 SYNE3Q6ZMZ3 975 aa14.63□□□□□ -0.07
HERC2-206ENST00000564519 C16orf59Q7L2K0 433 aa14.63□□□□□ -0.07
HERC2-206ENST00000564519 MTIF3Q9H2K0 278 aaKnown RBP14.63□□□□□ -0.07
HERC2-206ENST00000564519 ZNF576Q9H609 170 aa14.63□□□□□ -0.07
HERC2-206ENST00000564519 FAM217BQ9NTX9 383 aaPredicted RBP14.63□□□□□ -0.07
HERC2-206ENST00000564519 EYSQ5T1H1 3165 aa14.63□□□□□ -0.07
HERC2-206ENST00000564519 PIK3CDO00329 1044 aa14.62□□□□□ -0.07
HERC2-206ENST00000564519 ACRP10323 421 aa14.62□□□□□ -0.07
HERC2-206ENST00000564519 CYP2C9P11712 490 aa14.62□□□□□ -0.07
HERC2-206ENST00000564519 UBA1P22314 1058 aaKnown RBP14.62□□□□□ -0.07
HERC2-206ENST00000564519 CDC27P30260 824 aa14.62□□□□□ -0.07
HERC2-206ENST00000564519 GRIN2CQ14957 1233 aa14.62□□□□□ -0.07
HERC2-206ENST00000564519 UBE2SQ16763 222 aa14.62□□□□□ -0.07
HERC2-206ENST00000564519 RTN1Q16799 776 aa14.62□□□□□ -0.07
HERC2-206ENST00000564519 FAM47CQ5HY64 1035 aa14.62□□□□□ -0.07
HERC2-206ENST00000564519 PSRC1Q6PGN9 363 aaPredicted RBP14.62□□□□□ -0.07
HERC2-206ENST00000564519 Q6ZUG5 572 aa14.62□□□□□ -0.07
HERC2-206ENST00000564519 SMARCC2Q8TAQ2 1214 aa14.62□□□□□ -0.07
HERC2-206ENST00000564519 KAT2BQ92831 832 aa14.62□□□□□ -0.07
HERC2-206ENST00000564519 EMID1Q96A84 441 aaPredicted RBP14.62□□□□□ -0.07
HERC2-206ENST00000564519 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.62□□□□□ -0.07
HERC2-206ENST00000564519 NOC4LQ9BVI4 516 aaKnown RBP14.62□□□□□ -0.07
HERC2-206ENST00000564519 HIPK3Q9H422 1215 aa14.62□□□□□ -0.07
HERC2-206ENST00000564519 BCAS3Q9H6U6 928 aa14.62□□□□□ -0.07
HERC2-206ENST00000564519 RTEL1Q9NZ71 1219 aa14.62□□□□□ -0.07
HERC2-206ENST00000564519 BAZ2BQ9UIF8 2168 aaKnown RBP14.62□□□□□ -0.07
HERC2-206ENST00000564519 GOLGA8AA7E2F4 631 aa14.61□□□□□ -0.07
HERC2-206ENST00000564519 GOLGA8BA8MQT2 603 aa14.61□□□□□ -0.07
HERC2-206ENST00000564519 KPNA6O60684 536 aa14.61□□□□□ -0.07
HERC2-206ENST00000564519 REC8O95072 547 aa14.61□□□□□ -0.07
HERC2-206ENST00000564519 HMGB1P09429 215 aaKnown RBP14.61□□□□□ -0.07
HERC2-206ENST00000564519 CCL23P55773 120 aa14.61□□□□□ -0.07
HERC2-206ENST00000564519 CHMP4BP1P59074 171 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms