RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 H7BY64 318 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 ZNF561-AS1K7EIQ3 104 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 CHRNA4P43681 627 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 GTF2A2P52657 109 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 KRT85P78386 507 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 TEKQ02763 1124 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 FAM47CQ5HY64 1035 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 FAM102BQ5T8I3 360 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 TMPRSS7Q7RTY8 843 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 CCAR1Q8IX12 1150 aaKnown RBP3.45□□□□□ -1.86
CHD9-209ENST00000564255 MYO1HQ8N1T3 1032 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 PANK1Q8TE04 598 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 SCYL1Q96KG9 808 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 GPR101Q96P66 508 aaPredicted RBP3.45□□□□□ -1.86
CHD9-209ENST00000564255 AASDHPPTQ9NRN7 309 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 AP5S1Q9NUS5 200 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 OXSMQ9NWU1 459 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 THG1LQ9NWX6 298 aaKnown RBP3.45□□□□□ -1.86
CHD9-209ENST00000564255 ZIM2Q9NZV7 527 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 STOML1Q9UBI4 398 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 SNX11Q9Y5W9 270 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 SSU72P8A0A1W2PR75 194 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 PTPDC1A2A3K4 754 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 GSTA4O15217 222 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 CEACAM5P06731 702 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 ZBTB48P10074 688 aaPredicted RBP3.45□□□□□ -1.86
CHD9-209ENST00000564255 SESN3P58005 492 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 RBM10P98175 930 aaKnown RBP3.45□□□□□ -1.86
CHD9-209ENST00000564255 CPSF6Q16630 551 aaKnown RBP eCLIP3.45□□□□□ -1.86
CHD9-209ENST00000564255 RGL3Q3MIN7 710 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 TMEM240Q5SV17 173 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 DUSP27Q5VZP5 1158 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 C14orf80Q86SX3 495 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 DPF3Q92784 378 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 UBE2FQ969M7 185 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 FUBP3Q96I24 572 aaKnown RBP eCLIP3.45□□□□□ -1.86
CHD9-209ENST00000564255 MFSD14AQ96MC6 490 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 SMAD5Q99717 465 aaKnown RBP3.45□□□□□ -1.86
CHD9-209ENST00000564255 RHOBTB2Q9BYZ6 727 aa3.45□□□□□ -1.86
CHD9-209ENST00000564255 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.44□□□□□ -1.86
CHD9-209ENST00000564255 C7orf72A4D263 438 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 PLEKHD1A6NEE1 506 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 H3BS24 57 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 MYO1BO43795 1136 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 CAND2O75155 1236 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 ESR1P03372 595 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 DNM2P50570 870 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 KPNA1P52294 538 aaPredicted RBP3.44□□□□□ -1.86
CHD9-209ENST00000564255 RPL11P62913 178 aaKnown RBP3.44□□□□□ -1.86
CHD9-209ENST00000564255 KLF1Q13351 362 aaPredicted RBP3.44□□□□□ -1.86
CHD9-209ENST00000564255 GPR19Q15760 415 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 GPR158Q5T848 1215 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 CD163Q86VB7 1156 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 NLRP10Q86W26 655 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 WDR75Q8IWA0 830 aaKnown RBP3.44□□□□□ -1.86
CHD9-209ENST00000564255 TTC8Q8TAM2 541 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 DBNDD2Q9BQY9 259 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 ZSWIM5Q9P217 1185 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 DUSP13Q9UII6 198 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 RIPOR2Q9Y4F9 1068 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 PCDHA2Q9Y5H9 948 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 PITPNM2Q9BZ72 1349 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 DVL2O14641 736 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 NPHS1O60500 1241 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 TBC1D8O95759 1140 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 AMY2AP04746 511 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 AMY2BP19961 511 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 PHC1P78364 1004 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 CRY1Q16526 586 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 CDKAL1Q5VV42 579 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 IQSEC1Q6DN90 963 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 CPNE8Q86YQ8 564 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 EFHBQ8N7U6 833 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 C2orf69Q8N8R5 385 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 CLRN3Q8NCR9 226 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 SLC39A13Q96H72 371 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 METTL22Q9BUU2 404 aaPredicted RBP3.44□□□□□ -1.86
CHD9-209ENST00000564255 SMURF1Q9HCE7 757 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 ERVK13-1Q9NX77 482 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 PCDHA11Q9Y5I1 949 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 X6R8D5 127 aa3.44□□□□□ -1.86
CHD9-209ENST00000564255 ARID4BQ4LE39 1312 aaPredicted RBP3.44□□□□□ -1.86
CHD9-209ENST00000564255 C1QTNF9BB2RNN3 333 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 TPD52L2O43399 206 aaKnown RBP3.43□□□□□ -1.86
CHD9-209ENST00000564255 PPP1R11O60927 126 aaPredicted RBP3.43□□□□□ -1.86
CHD9-209ENST00000564255 GRIK1P39086 918 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 NFIAQ12857 509 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 MLC1Q15049 377 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 IFI16Q16666 785 aaKnown RBP3.43□□□□□ -1.86
CHD9-209ENST00000564255 CXorf57Q6NSI4 855 aaKnown RBP3.43□□□□□ -1.86
CHD9-209ENST00000564255 HHIPL2Q6UWX4 724 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 C11orf74Q86VG3 221 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 MAGEB6Q8N7X4 407 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 NLGN2Q8NFZ4 835 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 SLC5A5Q92911 643 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 TP53INP1Q96A56 240 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 FCRL2Q96LA5 508 aaPredicted RBP3.43□□□□□ -1.86
CHD9-209ENST00000564255 VTA1Q9NP79 307 aa3.43□□□□□ -1.86
CHD9-209ENST00000564255 H2AFY2Q9P0M6 372 aaPredicted RBP3.43□□□□□ -1.86
CHD9-209ENST00000564255 FKTNO75072 461 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms