RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 SLFN12Q8IYM2 578 aa14.52□□□□□ -0.09
CLK3-214ENST00000564096 MBOAT7Q96N66 472 aa14.52□□□□□ -0.09
CLK3-214ENST00000564096 TAAR1Q96RJ0 339 aa14.52□□□□□ -0.09
CLK3-214ENST00000564096 IWS1Q96ST2 819 aa14.52□□□□□ -0.09
CLK3-214ENST00000564096 LMBRD1Q9NUN5 540 aa14.52□□□□□ -0.09
CLK3-214ENST00000564096 ZNF236Q9UL36 1845 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 WNT7AO00755 349 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 SLC37A4O43826 429 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 PTPREP23469 700 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 TXLNAP40222 546 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 VEGFBP49765 207 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 ALDH5A1P51649 535 aaPredicted RBP14.51□□□□□ -0.09
CLK3-214ENST00000564096 UBXN2AP68543 259 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 GNPTABQ3T906 1256 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 PRR16Q569H4 304 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 ADALQ6DHV7 355 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 DTHD1Q6ZMT9 781 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 NLRX1Q86UT6 975 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 FAM133AQ8N9E0 248 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 SOCS4Q8WXH5 440 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 MRPS27Q92552 414 aaKnown RBP14.51□□□□□ -0.09
CLK3-214ENST00000564096 CDHR1Q96JP9 859 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 ZIC5Q96T25 663 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 TCEAL9Q9UHQ7 104 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 FBXO2Q9UK22 296 aaPredicted RBP14.51□□□□□ -0.09
CLK3-214ENST00000564096 PCDHA7Q9UN72 937 aa14.51□□□□□ -0.09
CLK3-214ENST00000564096 SRPRBQ9Y5M8 271 aaKnown RBP14.51□□□□□ -0.09
CLK3-214ENST00000564096 VWA3AA6NCI4 1184 aa14.5□□□□□ -0.09
CLK3-214ENST00000564096 SLC15A5A6NIM6 579 aa14.5□□□□□ -0.09
CLK3-214ENST00000564096 NR3C2P08235 984 aa14.5□□□□□ -0.09
CLK3-214ENST00000564096 MYCLP12524 364 aaPredicted RBP14.5□□□□□ -0.09
CLK3-214ENST00000564096 ADORA2AP29274 412 aa14.5□□□□□ -0.09
CLK3-214ENST00000564096 LONP1P36776 959 aaKnown RBP14.5□□□□□ -0.09
CLK3-214ENST00000564096 PDE4DQ08499 809 aa14.5□□□□□ -0.09
CLK3-214ENST00000564096 GRB14Q14449 540 aa14.5□□□□□ -0.09
CLK3-214ENST00000564096 PLA2G4DQ86XP0 818 aa14.5□□□□□ -0.09
CLK3-214ENST00000564096 ZNF579Q8NAF0 562 aaKnown RBP14.5□□□□□ -0.09
CLK3-214ENST00000564096 FAM20AQ96MK3 541 aa14.5□□□□□ -0.09
CLK3-214ENST00000564096 MXRA8Q9BRK3 442 aa14.5□□□□□ -0.09
CLK3-214ENST00000564096 CFHR5Q9BXR6 569 aa14.5□□□□□ -0.09
CLK3-214ENST00000564096 FAM13BQ9NYF5 915 aa14.5□□□□□ -0.09
CLK3-214ENST00000564096 DDX49Q9Y6V7 483 aaKnown RBP14.5□□□□□ -0.09
CLK3-214ENST00000564096 DNAJC25-GNG10A0A024R161 153 aa14.49□□□□□ -0.09
CLK3-214ENST00000564096 ASB14A6NK59 587 aa14.49□□□□□ -0.09
CLK3-214ENST00000564096 FAM86B1E9PN63 330 aa14.49□□□□□ -0.09
CLK3-214ENST00000564096 TNPO2O14787 897 aaKnown RBP14.49□□□□□ -0.09
CLK3-214ENST00000564096 FAM86B2P0C5J1 330 aa14.49□□□□□ -0.09
CLK3-214ENST00000564096 FCGRTP55899 365 aa14.49□□□□□ -0.09
CLK3-214ENST00000564096 MTMR1Q13613 665 aa14.49□□□□□ -0.09
CLK3-214ENST00000564096 KIF22Q14807 665 aa14.49□□□□□ -0.09
CLK3-214ENST00000564096 STXBP2Q15833 593 aa14.49□□□□□ -0.09
CLK3-214ENST00000564096 IL31RAQ8NI17 732 aa14.49□□□□□ -0.09
CLK3-214ENST00000564096 SYAP1Q96A49 352 aaPredicted RBP14.49□□□□□ -0.09
CLK3-214ENST00000564096 GPRASP2Q96D09 838 aa14.49□□□□□ -0.09
CLK3-214ENST00000564096 AK8Q96MA6 479 aa14.49□□□□□ -0.09
CLK3-214ENST00000564096 PYM1Q9BRP8 204 aaKnown RBP14.49□□□□□ -0.09
CLK3-214ENST00000564096 KCNMB3Q9NPA1 279 aa14.49□□□□□ -0.09
CLK3-214ENST00000564096 SAGE1Q9NXZ1 904 aa14.49□□□□□ -0.09
CLK3-214ENST00000564096 IGLV3-22A0A075B6J6 115 aa14.48□□□□□ -0.09
CLK3-214ENST00000564096 PGK2P07205 417 aa14.48□□□□□ -0.09
CLK3-214ENST00000564096 FXR2P51116 673 aaKnown RBP eCLIP14.48□□□□□ -0.09
CLK3-214ENST00000564096 CNTN2Q02246 1040 aa14.48□□□□□ -0.09
CLK3-214ENST00000564096 KLHL40Q2TBA0 621 aa14.48□□□□□ -0.09
CLK3-214ENST00000564096 ZNF467Q7Z7K2 595 aaPredicted RBP14.48□□□□□ -0.09
CLK3-214ENST00000564096 DPP9Q86TI2 863 aa14.48□□□□□ -0.09
CLK3-214ENST00000564096 VSIG10LQ86VR7 867 aa14.48□□□□□ -0.09
CLK3-214ENST00000564096 C4orf32Q8N8J7 132 aa14.48□□□□□ -0.09
CLK3-214ENST00000564096 FSIP1Q8NA03 581 aa14.48□□□□□ -0.09
CLK3-214ENST00000564096 LENG9Q96B70 501 aa14.48□□□□□ -0.09
CLK3-214ENST00000564096 MTMR9Q96QG7 549 aa14.48□□□□□ -0.09
CLK3-214ENST00000564096 TMEM60Q9H2L4 133 aa14.48□□□□□ -0.09
CLK3-214ENST00000564096 JADE2Q9NQC1 790 aa14.48□□□□□ -0.09
CLK3-214ENST00000564096 DIS3Q9Y2L1 958 aaKnown RBP14.48□□□□□ -0.09
CLK3-214ENST00000564096 UBIAD1Q9Y5Z9 338 aa14.48□□□□□ -0.09
CLK3-214ENST00000564096 STK24Q9Y6E0 443 aa14.48□□□□□ -0.09
CLK3-214ENST00000564096 PLXNB2O15031 1838 aa14.48□□□□□ -0.09
CLK3-214ENST00000564096 MEIS1O00470 390 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 MAFGO15525 162 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 EIF3JO75822 258 aaKnown RBP14.47□□□□□ -0.09
CLK3-214ENST00000564096 CMA1P23946 247 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 EDNRBP24530 442 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 RGS2P41220 211 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 TXKP42681 527 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 TPRNQ4KMQ1 711 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 AXDND1Q5T1B0 1012 aaPredicted RBP14.47□□□□□ -0.09
CLK3-214ENST00000564096 HAUS3Q68CZ6 603 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 MSL3Q8N5Y2 521 aaKnown RBP14.47□□□□□ -0.09
CLK3-214ENST00000564096 RASSF8Q8NHQ8 419 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 ERMNQ8TAM6 284 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 ETNPPLQ8TBG4 499 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 CCDC34Q96HJ3 373 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 INPP4AQ96PE3 977 aaPredicted RBP14.47□□□□□ -0.09
CLK3-214ENST00000564096 PURBQ96QR8 312 aaKnown RBP14.47□□□□□ -0.09
CLK3-214ENST00000564096 APBA2Q99767 749 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 NUDT12Q9BQG2 462 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 ZNF577Q9BSK1 485 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 BEGAINQ9BUH8 593 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 WDR11Q9BZH6 1224 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 CSRNP2Q9H175 543 aa14.47□□□□□ -0.09
CLK3-214ENST00000564096 MYH7BA7E2Y1 1941 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms