RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 CLIP1P30622 1438 aa7.84□□□□□ -1.15
CHD9-205ENST00000562785 GRIN2AQ12879 1464 aa7.83□□□□□ -1.16
CHD9-205ENST00000562785 IBSPP21815 317 aaPredicted RBP7.83□□□□□ -1.16
CHD9-205ENST00000562785 SOX5P35711 763 aa7.83□□□□□ -1.16
CHD9-205ENST00000562785 RTP1P59025 263 aa7.83□□□□□ -1.16
CHD9-205ENST00000562785 AMPD3Q01432 767 aa7.83□□□□□ -1.16
CHD9-205ENST00000562785 PAK1Q13153 545 aa7.83□□□□□ -1.16
CHD9-205ENST00000562785 LSAMPQ13449 338 aa7.83□□□□□ -1.16
CHD9-205ENST00000562785 HSF5Q4G112 596 aaPredicted RBP7.83□□□□□ -1.16
CHD9-205ENST00000562785 NLRP10Q86W26 655 aa7.83□□□□□ -1.16
CHD9-205ENST00000562785 AGBL5Q8NDL9 886 aa7.83□□□□□ -1.16
CHD9-205ENST00000562785 NLGN2Q8NFZ4 835 aa7.83□□□□□ -1.16
CHD9-205ENST00000562785 CDIP1Q9H305 208 aa7.83□□□□□ -1.16
CHD9-205ENST00000562785 IQGAP2Q13576 1575 aa7.83□□□□□ -1.16
CHD9-205ENST00000562785 ADAMTS4O75173 837 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 SOD2P04179 222 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 KCNA6P17658 529 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 GRK2P25098 689 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 GRK3P35626 688 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 FLT3P36888 993 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 BCL6P41182 706 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 NR0B2Q15466 257 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 ZCCHC8Q6NZY4 707 aaKnown RBP7.82□□□□□ -1.16
CHD9-205ENST00000562785 ABHD17CQ6PCB6 329 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 CEP128Q6ZU80 1094 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 SPPL2CQ8IUH8 684 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 AHI1Q8N157 1196 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 OXR1Q8N573 874 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 PCDH19Q8TAB3 1148 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 PI4K2BQ8TCG2 481 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 PCMTD2Q9NV79 361 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 C19orf73Q9NVV2 129 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 ADAMTS6Q9UKP5 1117 aa7.82□□□□□ -1.16
CHD9-205ENST00000562785 hCG_2014768A0A024R1R8 64 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 FITM1A5D6W6 292 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 WTIPA6NIX2 430 aaPredicted RBP7.81□□□□□ -1.16
CHD9-205ENST00000562785 NOTOA8MTQ0 251 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 H7BY64 318 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 NRDCO43847 1150 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 NPTXRO95502 500 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 WNT11O96014 354 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 JMJD7P0C870 316 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 HK2P52789 917 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 PLCL1Q15111 1095 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 GALNT18Q6P9A2 607 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 ANKLE2Q86XL3 938 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 ZC3H7AQ8IWR0 971 aaKnown RBP7.81□□□□□ -1.16
CHD9-205ENST00000562785 ASIC4Q96FT7 647 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 ORAI3Q9BRQ5 295 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 SP110Q9HB58 689 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 PPARGC1AQ9UBK2 798 aaKnown RBP7.81□□□□□ -1.16
CHD9-205ENST00000562785 GULP1Q9UBP9 304 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 ADGRE2Q9UHX3 823 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 TAF6LQ9Y6J9 622 aa7.81□□□□□ -1.16
CHD9-205ENST00000562785 SAMD9Q5K651 1589 aa7.8□□□□□ -1.16
CHD9-205ENST00000562785 FAM47E-STBD1D6RA91 191 aa7.8□□□□□ -1.16
CHD9-205ENST00000562785 PPM1GO15355 546 aaPredicted RBP7.8□□□□□ -1.16
CHD9-205ENST00000562785 PPP1R11O60927 126 aaPredicted RBP7.8□□□□□ -1.16
CHD9-205ENST00000562785 HPXP02790 462 aa7.8□□□□□ -1.16
CHD9-205ENST00000562785 CKMP06732 381 aa7.8□□□□□ -1.16
CHD9-205ENST00000562785 HSP90B1P14625 803 aaKnown RBP7.8□□□□□ -1.16
CHD9-205ENST00000562785 POU3F3P20264 500 aaPredicted RBP7.8□□□□□ -1.16
CHD9-205ENST00000562785 CNGA1P29973 690 aa7.8□□□□□ -1.16
CHD9-205ENST00000562785 GDNFP39905 211 aa7.8□□□□□ -1.16
CHD9-205ENST00000562785 LRP8Q14114 963 aa7.8□□□□□ -1.16
CHD9-205ENST00000562785 DDX53Q86TM3 631 aaKnown RBP7.8□□□□□ -1.16
CHD9-205ENST00000562785 MTA3Q9BTC8 594 aa7.8□□□□□ -1.16
CHD9-205ENST00000562785 CELF4Q9BZC1 486 aaKnown RBP7.8□□□□□ -1.16
CHD9-205ENST00000562785 MTFR1LQ9H019 292 aa7.8□□□□□ -1.16
CHD9-205ENST00000562785 IPPKQ9H8X2 491 aa7.8□□□□□ -1.16
CHD9-205ENST00000562785 MBNL3Q9NUK0 354 aaKnown RBP7.8□□□□□ -1.16
CHD9-205ENST00000562785 CLDND1Q9NY35 253 aa7.8□□□□□ -1.16
CHD9-205ENST00000562785 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.8□□□□□ -1.169e-7■■■■□ 20.9
CHD9-205ENST00000562785 IMPACTQ9P2X3 320 aa7.8□□□□□ -1.16
CHD9-205ENST00000562785 ACSL6Q9UKU0 697 aa7.8□□□□□ -1.16
CHD9-205ENST00000562785 NEK4P51957 841 aa7.79□□□□□ -1.16
CHD9-205ENST00000562785 IGBP1P78318 339 aa7.79□□□□□ -1.16
CHD9-205ENST00000562785 SLC14A2Q15849 920 aa7.79□□□□□ -1.16
CHD9-205ENST00000562785 CFAP100Q494V2 611 aa7.79□□□□□ -1.16
CHD9-205ENST00000562785 CDCA2Q69YH5 1023 aaPredicted RBP7.79□□□□□ -1.16
CHD9-205ENST00000562785 PKN3Q6P5Z2 889 aa7.79□□□□□ -1.16
CHD9-205ENST00000562785 UBE2R2Q712K3 238 aaPredicted RBP7.79□□□□□ -1.16
CHD9-205ENST00000562785 TP53INP2Q8IXH6 220 aa7.79□□□□□ -1.16
CHD9-205ENST00000562785 AFAP1L2Q8N4X5 818 aa7.79□□□□□ -1.16
CHD9-205ENST00000562785 TMEM169Q96HH4 297 aa7.79□□□□□ -1.16
CHD9-205ENST00000562785 CHAMP1Q96JM3 812 aa7.79□□□□□ -1.16
CHD9-205ENST00000562785 PLCD4Q9BRC7 762 aa7.79□□□□□ -1.16
CHD9-205ENST00000562785 MARCH2Q9P0N8 246 aa7.79□□□□□ -1.16
CHD9-205ENST00000562785 X6R8D5 127 aa7.79□□□□□ -1.16
CHD9-205ENST00000562785 VPS8Q8N3P4 1428 aa7.78□□□□□ -1.16
CHD9-205ENST00000562785 CHD1O14646 1710 aa7.78□□□□□ -1.16
CHD9-205ENST00000562785 KPNA6O60684 536 aa7.78□□□□□ -1.16
CHD9-205ENST00000562785 EFEMP2O95967 443 aa7.78□□□□□ -1.16
CHD9-205ENST00000562785 RNASE1P07998 156 aaKnown RBP7.78□□□□□ -1.16
CHD9-205ENST00000562785 FPR2P25090 351 aa7.78□□□□□ -1.16
CHD9-205ENST00000562785 MVKQ03426 396 aa7.78□□□□□ -1.16
CHD9-205ENST00000562785 PCBP1Q15365 356 aaKnown RBP eCLIP7.78□□□□□ -1.16
CHD9-205ENST00000562785 FAM47CQ5HY64 1035 aa7.78□□□□□ -1.16
CHD9-205ENST00000562785 CT47A1Q5JQC4 288 aaPredicted RBP7.78□□□□□ -1.16
CHD9-205ENST00000562785 ZMYM1Q5SVZ6 1142 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms