RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 SRSF11Q05519 484 aaKnown RBP6.87□□□□□ -1.31
CDH13-206ENST00000562601 PDE4BQ07343 736 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 PABPC4Q13310 644 aaKnown RBP eCLIP6.87□□□□□ -1.31
CDH13-206ENST00000562601 KIF22Q14807 665 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 ALX1Q15699 326 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 NOM1Q5C9Z4 860 aaKnown RBP6.87□□□□□ -1.31
CDH13-206ENST00000562601 CATSPERGQ6ZRH7 1159 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 ZSCAN1Q8NBB4 408 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 CCDC17Q96LX7 622 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 PAGR1Q9BTK6 254 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 TANGO6Q9C0B7 1094 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 PHACTR1Q9C0D0 580 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 KIAA1683Q9H0B3 1180 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 CLIP2Q9UDT6 1046 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 COL11A1P12107 1806 aaPredicted RBP6.87□□□□□ -1.31
CDH13-206ENST00000562601 CENPFP49454 3210 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 HTTP42858 3142 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 RLFQ13129 1914 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 ATXN7O15265 892 aaPredicted RBP6.86□□□□□ -1.31
CDH13-206ENST00000562601 TSPY3P0CV98 308 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 TSPY8P0CW00 308 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 MX2P20592 715 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 WEE1P30291 646 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 HOXA7P31268 230 aaPredicted RBP6.86□□□□□ -1.31
CDH13-206ENST00000562601 HERVK_113P62684 666 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 KRT76Q01546 638 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 PTH1RQ03431 593 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 RNFT1Q5M7Z0 435 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 SAMD5Q5TGI4 173 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 TICAM2Q86XR7 235 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 TBC1D10CQ8IV04 446 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 ALDH16A1Q8IZ83 802 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 STK32AQ8WU08 396 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 CEP95Q96GE4 821 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 C12orf42Q96LP6 360 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 NUP88Q99567 741 aaPredicted RBP6.86□□□□□ -1.31
CDH13-206ENST00000562601 ZCCHC2Q9C0B9 1178 aaKnown RBP6.86□□□□□ -1.31
CDH13-206ENST00000562601 VCPKMTQ9H867 229 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 KANSL2Q9H9L4 492 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 TXNRD2Q9NNW7 524 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 RBPJLQ9UBG7 517 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 ANAPC4Q9UJX5 808 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 GABRQQ9UN88 632 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 MTMR7Q9Y216 660 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 PTPN22Q9Y2R2 807 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.86□□□□□ -1.31
CDH13-206ENST00000562601 HCN4Q9Y3Q4 1203 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 PTCH2Q9Y6C5 1203 aa6.86□□□□□ -1.31
CDH13-206ENST00000562601 LAMA4Q16363 1823 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 PARP14Q460N5 1801 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 NEDD4P46934 1319 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 IGKV6D-41A0A0C4DH26 115 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 TSPY2A6NKD2 308 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 ZNF213O14771 459 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 CNMDO75829 334 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 THBS1P07996 1170 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 FAM157BP0CG42 384 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 MAP2K3P46734 347 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 GCLCP48506 637 aaPredicted RBP6.85□□□□□ -1.31
CDH13-206ENST00000562601 FCGRTP55899 365 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 UBAP2LQ14157 1087 aaKnown RBP6.85□□□□□ -1.31
CDH13-206ENST00000562601 GAS6Q14393 721 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 FAM83BQ5T0W9 1011 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 SH3PXD2AQ5TCZ1 1133 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 FBXO46Q6PJ61 603 aaPredicted RBP6.85□□□□□ -1.31
CDH13-206ENST00000562601 MFSD6Q6ZSS7 791 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 LRRC47Q8N1G4 583 aaKnown RBP6.85□□□□□ -1.31
CDH13-206ENST00000562601 GPRC5AQ8NFJ5 357 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 NEDD1Q8NHV4 660 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 ZKSCAN3Q9BRR0 538 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 SH2D4AQ9H788 454 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 ZNF287Q9HBT7 754 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 IL17RBQ9NRM6 502 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 FBXO28Q9NVF7 368 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 PPP4R2Q9NY27 417 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 MTMR4Q9NYA4 1195 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 BTBD7Q9P203 1132 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 NYAP2Q9P242 653 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 ISY1Q9ULR0 285 aaKnown RBP6.85□□□□□ -1.31
CDH13-206ENST00000562601 TMX2Q9Y320 296 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 PLXNB2O15031 1838 aa6.85□□□□□ -1.31
CDH13-206ENST00000562601 ZNFX1Q9P2E3 1918 aaKnown RBP6.84□□□□□ -1.31
CDH13-206ENST00000562601 MYPNQ86TC9 1320 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 F5H6K3 240 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 TNPO2O14787 897 aaKnown RBP6.84□□□□□ -1.31
CDH13-206ENST00000562601 SGSM2O43147 1006 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 ORC4O43929 436 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 FLOT1O75955 427 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 TTLL1O95922 423 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 NDUFB10O96000 172 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 FGFR3P22607 806 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 SOX10P56693 466 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 ERVK-24P63145 666 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 PRKCZQ05513 592 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 KLRC3Q07444 240 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 LAMC2Q13753 1193 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 COG2Q14746 738 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 ARHGEF6Q15052 776 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 PKN2Q16513 984 aaKnown RBP6.84□□□□□ -1.31
CDH13-206ENST00000562601 RTN1Q16799 776 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms