RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 NBPF20Q3BBV1 942 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 Q6ZUG5 572 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 TMTC3Q6ZXV5 915 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 HEATR3Q7Z4Q2 680 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 FANCBQ8NB91 859 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 SCLYQ96I15 445 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 PGBD1Q96JS3 809 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 RNPC3Q96LT9 517 aaKnown RBP10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 TOX2Q96NM4 488 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 IWS1Q96ST2 819 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 LARP6Q9BRS8 491 aaKnown RBP10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 MTG1Q9BT17 334 aaPredicted RBP10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 ALG1Q9BT22 464 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 SPZ1Q9BXG8 430 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 POLR3EQ9NVU0 708 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 DDX41Q9UJV9 622 aaKnown RBP10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 MYH7BA7E2Y1 1941 aa10.94□□□□□ -0.66
NSMCE1-203ENST00000562039 MROH7Q68CQ1 1323 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 LOC102724159A0A0B4J2E5 919 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 ZBTB43O43298 467 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 EIF3JO75822 258 aaKnown RBP10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 CABYRO75952 493 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 RGS20O76081 388 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 CD4P01730 458 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 MMP3P08254 477 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 ZNF286BP0CG31 522 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 CDC27P30260 824 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 CCND2P30279 289 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 GNAQP50148 359 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 SP4Q02446 784 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 PWP2Q15269 919 aaKnown RBP10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 RTN1Q16799 776 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 LRIT3Q3SXY7 679 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 APOA5Q6Q788 366 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 DHX37Q8IY37 1157 aaKnown RBP10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 TMTC2Q8N394 836 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 DEFB123Q8N688 67 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 SLC43A3Q8NBI5 491 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 CUL5Q93034 780 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 ALDH8A1Q9H2A2 487 aaPredicted RBP10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 HIPK3Q9H422 1215 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 PPP4R2Q9NY27 417 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 PKD2L1Q9P0L9 805 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 TELO2Q9Y4R8 837 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 KIAA1217Q5T5P2 1943 aa10.93□□□□□ -0.66
NSMCE1-203ENST00000562039 CNTNAP5Q8WYK1 1306 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 A6NJR5 290 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 GRXCR1A8MXD5 290 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 NKRFO15226 690 aaKnown RBP eCLIP10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 DTNBO60941 627 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 GGPS1O95749 300 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 CALM1P0DP23 149 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 CALM2P0DP24 149 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 CALM3P0DP25 149 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 HSPA4P34932 840 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 MRPS9P82933 396 aaKnown RBP10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 SP2Q02086 613 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 BRDTQ58F21 947 aaPredicted RBP10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 FAM109BQ6ICB4 259 aaPredicted RBP10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 MFSD5Q6N075 450 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 C16orf59Q7L2K0 433 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 VSIG10LQ86VR7 867 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 BRF1Q92994 677 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 MAP3K14Q99558 947 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 LZTS2Q9BRK4 669 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 MTA3Q9BTC8 594 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 WNT8AQ9H1J5 351 aa10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 V9GY48 417 aaPredicted RBP10.92□□□□□ -0.66
NSMCE1-203ENST00000562039 MEIS2O14770 477 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 CASTP20810 708 aaKnown RBP10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 UBA1P22314 1058 aaKnown RBP10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 ADD1P35611 737 aaKnown RBP10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 CCT2P78371 535 aaKnown RBP10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 GHRHRQ02643 423 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 TRAF1Q13077 416 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 KRT32Q14532 448 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 WWC2Q6AWC2 1192 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 TYW1BQ6NUM6 668 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 BLOC1S2Q6QNY1 142 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 ZNF365Q70YC5 407 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 DEFB128Q7Z7B8 93 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 SGMS1Q86VZ5 419 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 TMEM199Q8N511 208 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 KAT2BQ92831 832 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 SPATA33Q96N06 139 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 UIMC1Q96RL1 719 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 NOC4LQ9BVI4 516 aaKnown RBP10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 PSTPIP2Q9H939 334 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 MLXIPQ9HAP2 919 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 FAM217BQ9NTX9 383 aaPredicted RBP10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 TMEM260Q9NX78 707 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 NOD1Q9Y239 953 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 DOCK5Q9H7D0 1870 aa10.91□□□□□ -0.66
NSMCE1-203ENST00000562039 CENPBP07199 599 aaPredicted RBP10.9□□□□□ -0.66
NSMCE1-203ENST00000562039 RPS6KB1P23443 525 aa10.9□□□□□ -0.66
NSMCE1-203ENST00000562039 PSEN2P49810 448 aa10.9□□□□□ -0.66
NSMCE1-203ENST00000562039 METAP2P50579 478 aaKnown RBP eCLIP10.9□□□□□ -0.66
NSMCE1-203ENST00000562039 NAPAP54920 295 aa10.9□□□□□ -0.66
NSMCE1-203ENST00000562039 ZNF200P98182 395 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms