RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 ZFP91Q96JP5 570 aaPredicted RBP9.59□□□□□ -0.87
GINS3-204ENST00000561952 PIGSQ96S52 555 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 MTG1Q9BT17 334 aaPredicted RBP9.59□□□□□ -0.87
GINS3-204ENST00000561952 AMNQ9BXJ7 453 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 TTYH1Q9H313 450 aaPredicted RBP9.59□□□□□ -0.87
GINS3-204ENST00000561952 POLR3EQ9NVU0 708 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 Q9Y3F1 56 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 TANC1Q9C0D5 1861 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 TRIP12Q14669 1992 aaPredicted RBP9.59□□□□□ -0.87
GINS3-204ENST00000561952 A0A0C4DFX4 3053 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 LOC102724159A0A0B4J2E5 919 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 RBM47A0AV96 593 aaKnown RBP9.58□□□□□ -0.88
GINS3-204ENST00000561952 RBAK-RBAKDNI3L0D1 243 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 ZBTB5O15062 677 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 ANTXR2P58335 489 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 NKX3-2P78367 333 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 SMAD3P84022 425 aaKnown RBP9.58□□□□□ -0.88
GINS3-204ENST00000561952 GRM4Q14833 912 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 SART3Q15020 963 aaKnown RBP9.58□□□□□ -0.88
GINS3-204ENST00000561952 PWP2Q15269 919 aaKnown RBP9.58□□□□□ -0.88
GINS3-204ENST00000561952 SLC35G1Q2M3R5 365 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 NBPF20Q3BBV1 942 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 BRDTQ58F21 947 aaPredicted RBP9.58□□□□□ -0.88
GINS3-204ENST00000561952 TMEM240Q5SV17 173 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 ZNF365Q70YC5 407 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 C16orf59Q7L2K0 433 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 OTOP2Q7RTS6 562 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 FCHSD1Q86WN1 690 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 SLC43A3Q8NBI5 491 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 NSUN6Q8TEA1 469 aaKnown RBP9.58□□□□□ -0.88
GINS3-204ENST00000561952 AFG1LQ8WV93 481 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 CDX2Q99626 313 aaPredicted RBP9.58□□□□□ -0.88
GINS3-204ENST00000561952 WNT8AQ9H1J5 351 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 ALDH8A1Q9H2A2 487 aaPredicted RBP9.58□□□□□ -0.88
GINS3-204ENST00000561952 SEMA6BQ9H3T3 888 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 PXMP2Q9NR77 195 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 PCDHA1Q9Y5I3 950 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 MYO9BQ13459 2157 aa9.58□□□□□ -0.88
GINS3-204ENST00000561952 PALM3A6NDB9 673 aaPredicted RBP9.57□□□□□ -0.88
GINS3-204ENST00000561952 ZBBXA8MT70 800 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 OPLAHO14841 1288 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 NKRFO15226 690 aaKnown RBP eCLIP9.57□□□□□ -0.88
GINS3-204ENST00000561952 MMP3P08254 477 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 PYGBP11216 843 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 RXRAP19793 462 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 DNAJB2P25686 324 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 PBX2P40425 430 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 COL9A3Q14050 684 aaPredicted RBP9.57□□□□□ -0.88
GINS3-204ENST00000561952 STXBP2Q15833 593 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 PSRC1Q6PGN9 363 aaPredicted RBP9.57□□□□□ -0.88
GINS3-204ENST00000561952 CASC1Q6TDU7 716 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 NFXL1Q6ZNB6 911 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 DEFB128Q7Z7B8 93 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 CATIPQ7Z7H3 387 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 MB21D2Q8IYB1 491 aaPredicted RBP9.57□□□□□ -0.88
GINS3-204ENST00000561952 RGS22Q8NE09 1264 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 IL31RAQ8NI17 732 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 NOC4LQ9BVI4 516 aaKnown RBP9.57□□□□□ -0.88
GINS3-204ENST00000561952 LRRC2Q9BYS8 371 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 IL23AQ9NPF7 189 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 ANO2Q9NQ90 1003 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 CXXC1Q9P0U4 656 aaPredicted RBP9.57□□□□□ -0.88
GINS3-204ENST00000561952 NOD1Q9Y239 953 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 MRVI1Q9Y6F6 885 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 VCANP13611 3396 aa9.57□□□□□ -0.88
GINS3-204ENST00000561952 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.56□□□□□ -0.88
GINS3-204ENST00000561952 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.56□□□□□ -0.88
GINS3-204ENST00000561952 SLC27A2O14975 620 aa9.56□□□□□ -0.88
GINS3-204ENST00000561952 PRC1O43663 620 aa9.56□□□□□ -0.88
GINS3-204ENST00000561952 CYTH3O43739 400 aa9.56□□□□□ -0.88
GINS3-204ENST00000561952 GH1P01241 217 aa9.56□□□□□ -0.88
GINS3-204ENST00000561952 NR3C2P08235 984 aa9.56□□□□□ -0.88
GINS3-204ENST00000561952 ZNF286BP0CG31 522 aa9.56□□□□□ -0.88
GINS3-204ENST00000561952 FOSL2P15408 326 aa9.56□□□□□ -0.88
GINS3-204ENST00000561952 HSD17B4P51659 736 aa9.56□□□□□ -0.88
GINS3-204ENST00000561952 ARHGAP1Q07960 439 aa9.56□□□□□ -0.88
GINS3-204ENST00000561952 ZNF654Q8IZM8 581 aa9.56□□□□□ -0.88
GINS3-204ENST00000561952 CMTR1Q8N1G2 835 aaKnown RBP9.56□□□□□ -0.88
GINS3-204ENST00000561952 MAP4K1Q92918 833 aa9.56□□□□□ -0.88
GINS3-204ENST00000561952 TIFAQ96CG3 184 aa9.56□□□□□ -0.88
GINS3-204ENST00000561952 ESYT1Q9BSJ8 1104 aa9.56□□□□□ -0.88
GINS3-204ENST00000561952 ALG1Q9BT22 464 aa9.56□□□□□ -0.88
GINS3-204ENST00000561952 LSG1Q9H089 658 aaKnown RBP9.56□□□□□ -0.88
GINS3-204ENST00000561952 LY9Q9HBG7 655 aa9.56□□□□□ -0.88
GINS3-204ENST00000561952 CCDC69A6NI79 296 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 A6NJR5 290 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 GCOM1H8Y6P7 765 aaPredicted RBP9.55□□□□□ -0.88
GINS3-204ENST00000561952 DLL1O00548 723 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 PLEKHA8P1O95397 391 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 FGBP02675 491 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 POLR2MP0CAP2 368 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 RABGGTBP53611 331 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 EMP3P54852 163 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 TROAPQ12815 778 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 GRIN2CQ14957 1233 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 PGM5Q15124 567 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 CREB3L3Q68CJ9 461 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 CCDC62Q6P9F0 684 aa9.55□□□□□ -0.88
GINS3-204ENST00000561952 MAFAQ8NHW3 353 aaPredicted RBP9.55□□□□□ -0.88
GINS3-204ENST00000561952 CTCFLQ8NI51 663 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms