RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ECE1P42892 770 aa10.96□□□□□ -0.65
SMG1-205ENST00000561947 DYMQ7RTS9 669 aa10.96□□□□□ -0.65
SMG1-205ENST00000561947 FAM114A1Q8IWE2 563 aa10.96□□□□□ -0.65
SMG1-205ENST00000561947 SLFN12Q8IYM2 578 aa10.96□□□□□ -0.65
SMG1-205ENST00000561947 SPICE1Q8N0Z3 855 aa10.96□□□□□ -0.65
SMG1-205ENST00000561947 MB21D1Q8N884 522 aa10.96□□□□□ -0.65
SMG1-205ENST00000561947 ANKRD7Q92527 254 aa10.96□□□□□ -0.65
SMG1-205ENST00000561947 HPS3Q969F9 1004 aa10.96□□□□□ -0.65
SMG1-205ENST00000561947 NT5C3AQ9H0P0 336 aa10.96□□□□□ -0.65
SMG1-205ENST00000561947 L2HGDHQ9H9P8 463 aa10.96□□□□□ -0.65
SMG1-205ENST00000561947 VEZTQ9HBM0 779 aa10.96□□□□□ -0.65
SMG1-205ENST00000561947 GOPCQ9HD26 462 aa10.96□□□□□ -0.65
SMG1-205ENST00000561947 SLC39A2Q9NP94 309 aa10.96□□□□□ -0.65
SMG1-205ENST00000561947 TMX2Q9Y320 296 aa10.96□□□□□ -0.65
SMG1-205ENST00000561947 A0A1W2PQC6 194 aa10.96□□□□□ -0.66
SMG1-205ENST00000561947 TBC1D12O60347 775 aa10.96□□□□□ -0.66
SMG1-205ENST00000561947 STAT2P52630 851 aa10.96□□□□□ -0.66
SMG1-205ENST00000561947 MTF1Q14872 753 aa10.96□□□□□ -0.66
SMG1-205ENST00000561947 RAD9BQ6WBX8 426 aa10.96□□□□□ -0.66
SMG1-205ENST00000561947 ZNF507Q8TCN5 953 aa10.96□□□□□ -0.66
SMG1-205ENST00000561947 ACER1Q8TDN7 264 aa10.96□□□□□ -0.66
SMG1-205ENST00000561947 DDX12PQ92771 950 aa10.96□□□□□ -0.66
SMG1-205ENST00000561947 PDCL3Q9H2J4 239 aa10.96□□□□□ -0.66
SMG1-205ENST00000561947 DNAI1Q9UI46 699 aa10.96□□□□□ -0.66
SMG1-205ENST00000561947 SMCHD1A6NHR9 2005 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 SPDYE3A6NKU9 549 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 SREBF1P36956 1147 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 EHHADHQ08426 723 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 NCBP1Q09161 790 aaKnown RBP10.95□□□□□ -0.66
SMG1-205ENST00000561947 Q4G0T1 1027 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 KIAA1755Q5JYT7 1200 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 CENPPQ6IPU0 288 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 FAM83AQ86UY5 434 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 DESI2Q9BSY9 194 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 SEMA6BQ9H3T3 888 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 FER1L6Q2WGJ9 1857 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 OPLAHO14841 1288 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 TBX3O15119 743 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 CCDC175P0C221 793 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 TAL1P17542 331 aaPredicted RBP10.95□□□□□ -0.66
SMG1-205ENST00000561947 DNM2P50570 870 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 TRAF1Q13077 416 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 PSMD2Q13200 908 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 GUF1Q8N442 669 aaKnown RBP10.95□□□□□ -0.66
SMG1-205ENST00000561947 ETNPPLQ8TBG4 499 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 ZBED3Q96IU2 234 aaPredicted RBP10.95□□□□□ -0.66
SMG1-205ENST00000561947 CNOT6LQ96LI5 555 aaKnown RBP10.95□□□□□ -0.66
SMG1-205ENST00000561947 TUBGCP2Q9BSJ2 902 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 ABHD10Q9NUJ1 306 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 ATAD5Q96QE3 1844 aa10.95□□□□□ -0.66
SMG1-205ENST00000561947 RNF225M0QZC1 329 aaPredicted RBP10.94□□□□□ -0.66
SMG1-205ENST00000561947 PIK3CDO00329 1044 aa10.94□□□□□ -0.66
SMG1-205ENST00000561947 SLU7O95391 586 aaKnown RBP10.94□□□□□ -0.66
SMG1-205ENST00000561947 IDEP14735 1019 aa10.94□□□□□ -0.66
SMG1-205ENST00000561947 PRR16Q569H4 304 aa10.94□□□□□ -0.66
SMG1-205ENST00000561947 FAM83BQ5T0W9 1011 aa10.94□□□□□ -0.66
SMG1-205ENST00000561947 TEX2Q8IWB9 1127 aa10.94□□□□□ -0.66
SMG1-205ENST00000561947 DNAJC19Q96DA6 116 aa10.94□□□□□ -0.66
SMG1-205ENST00000561947 ERO1AQ96HE7 468 aa10.94□□□□□ -0.66
SMG1-205ENST00000561947 UIMC1Q96RL1 719 aa10.94□□□□□ -0.66
SMG1-205ENST00000561947 TMEM39BQ9GZU3 492 aa10.94□□□□□ -0.66
SMG1-205ENST00000561947 ZNF215Q9UL58 517 aaPredicted RBP10.94□□□□□ -0.66
SMG1-205ENST00000561947 ADGRG1Q9Y653 693 aa10.94□□□□□ -0.66
SMG1-205ENST00000561947 BRCA1P38398 1863 aaKnown RBP10.94□□□□□ -0.66
SMG1-205ENST00000561947 CIITAP33076 1130 aa10.94□□□□□ -0.66
SMG1-205ENST00000561947 CXCL9Q07325 125 aa10.94□□□□□ -0.66
SMG1-205ENST00000561947 TMTC1Q8IUR5 882 aa10.94□□□□□ -0.66
SMG1-205ENST00000561947 CDAN1Q8IWY9 1227 aa10.94□□□□□ -0.66
SMG1-205ENST00000561947 LENG9Q96B70 501 aa10.94□□□□□ -0.66
SMG1-205ENST00000561947 PIM2Q9P1W9 311 aa10.94□□□□□ -0.66
SMG1-205ENST00000561947 KIAA1024Q9UPX6 916 aa10.94□□□□□ -0.66
SMG1-205ENST00000561947 POTEB3A0JP26 581 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 POTECB2RU33 542 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 B4DLN1 442 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 PES1O00541 588 aaKnown RBP10.93□□□□□ -0.66
SMG1-205ENST00000561947 FANCGO15287 622 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 KRT9P35527 623 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 STAT3P40763 770 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 MTIF2P46199 727 aaKnown RBP10.93□□□□□ -0.66
SMG1-205ENST00000561947 SPIRE1Q08AE8 756 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 COASYQ13057 564 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 HAUS3Q68CZ6 603 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 POTEBQ6S5H4 581 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 VCPKMTQ9H867 229 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 MRPL44Q9H9J2 332 aaKnown RBP10.93□□□□□ -0.66
SMG1-205ENST00000561947 PGAP2Q9UHJ9 254 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 E9PMD0 336 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 FAM86B1E9PN63 330 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 CYP3A4P08684 503 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 FAM86B2P0C5J1 330 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 PLA2G4BP0C869 781 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 HOXA13P31271 388 aaPredicted RBP10.93□□□□□ -0.66
SMG1-205ENST00000561947 TGFB2P61812 414 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 ERVK-24P63145 666 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 FOXR2Q6PJQ5 311 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 CYP26C1Q6V0L0 522 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 MIGA2Q7L4E1 593 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 CHURC1Q8WUH1 139 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 FAM20AQ96MK3 541 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 RANBP17Q9H2T7 1088 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms