RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 ENPP3O14638 875 aa5.56□□□□□ -1.52
LRRC28-222ENST00000561431 SF1Q15637 639 aaKnown RBP5.56□□□□□ -1.52
LRRC28-222ENST00000561431 C21orf62-AS1Q17RA5 79 aa5.56□□□□□ -1.52
LRRC28-222ENST00000561431 EEF1DP3Q658K8 133 aa5.56□□□□□ -1.52
LRRC28-222ENST00000561431 C20orf173Q96LM9 149 aa5.56□□□□□ -1.52
LRRC28-222ENST00000561431 SLC12A9Q9BXP2 914 aa5.56□□□□□ -1.52
LRRC28-222ENST00000561431 CARS2Q9HA77 564 aaKnown RBP5.56□□□□□ -1.52
LRRC28-222ENST00000561431 CD320Q9NPF0 282 aa5.56□□□□□ -1.52
LRRC28-222ENST00000561431 GPRC5CQ9NQ84 441 aa5.56□□□□□ -1.52
LRRC28-222ENST00000561431 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.56□□□□□ -1.52
LRRC28-222ENST00000561431 ZFYVE16Q7Z3T8 1539 aa5.56□□□□□ -1.52
LRRC28-222ENST00000561431 EHBP1L1Q8N3D4 1523 aa5.56□□□□□ -1.52
LRRC28-222ENST00000561431 ARHGEF12Q9NZN5 1544 aa5.56□□□□□ -1.52
LRRC28-222ENST00000561431 ADAMTSL3P82987 1691 aa5.56□□□□□ -1.52
LRRC28-222ENST00000561431 YEATS2Q9ULM3 1422 aa5.56□□□□□ -1.52
LRRC28-222ENST00000561431 SAMD9LQ8IVG5 1584 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 GPATCH8Q9UKJ3 1502 aaKnown RBP5.55□□□□□ -1.52
LRRC28-222ENST00000561431 NPHP3-ACAD11A0A0J9YXS1 232 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 ANKRD62A6NC57 917 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 AURKAO14965 403 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 PPP1R12AO14974 1030 aaPredicted RBP5.55□□□□□ -1.52
LRRC28-222ENST00000561431 ZNF205O95201 554 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 TBC1D8O95759 1140 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 LAPTM5Q13571 262 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 KCNA10Q16322 511 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 PRSS53Q2L4Q9 553 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 GAB4Q2WGN9 574 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 FOXB2Q5VYV0 432 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 TICAM2Q86XR7 235 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 JAMLQ86YT9 394 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 SYNPOQ8N3V7 929 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 TMEM145Q8NBT3 493 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 OSBP2Q969R2 916 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 EXOC2Q96KP1 924 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 DIRC2Q96SL1 478 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 C19orf73Q9NVV2 129 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 SLAMF8Q9P0V8 285 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 CLEC1BQ9P126 229 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 MAGI2Q86UL8 1455 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 VPS8Q8N3P4 1428 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 SCAPERQ9BY12 1400 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 HECW2Q9P2P5 1572 aa5.55□□□□□ -1.52
LRRC28-222ENST00000561431 BCORL1Q5H9F3 1711 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 ZNF518AQ6AHZ1 1483 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 A0A1W2PQ27 194 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 A0A1W2PQ64 194 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 A0A1W2PQC6 194 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 A0A1W2PQD8 194 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 BLACEA4D250 179 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 PPM1GO15355 546 aaPredicted RBP5.54□□□□□ -1.52
LRRC28-222ENST00000561431 MEFVO15553 781 aaPredicted RBP5.54□□□□□ -1.52
LRRC28-222ENST00000561431 DLX3O60479 287 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 ESR1P03372 595 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 THBDP07204 575 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 PAMP19021 973 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 HOXA5P20719 270 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 GFRA1P56159 465 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 MAP4K2Q12851 820 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 RNF187Q5TA31 235 aaPredicted RBP5.54□□□□□ -1.52
LRRC28-222ENST00000561431 ZPBP2Q6X784 338 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 CERS3Q8IU89 383 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 PPIL6Q8IXY8 311 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 JMYQ8N9B5 988 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 FEZ1Q99689 392 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 MCMBPQ9BTE3 642 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 NSUN3Q9H649 340 aaKnown RBP5.54□□□□□ -1.52
LRRC28-222ENST00000561431 NDOR1Q9UHB4 597 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 ABCA6Q8N139 1617 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 DIP2CQ9Y2E4 1556 aa5.54□□□□□ -1.52
LRRC28-222ENST00000561431 MADDQ8WXG6 1647 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 DNAJC25-GNG10A0A024R161 153 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 TRBV23OR9-2A0A075B6M9 112 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 TMEM253P0C7T8 217 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 PLS3P13797 630 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 NCLP19338 710 aaKnown RBP5.53□□□□□ -1.52
LRRC28-222ENST00000561431 TEKQ02763 1124 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 DUSP4Q13115 394 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 SLC14A2Q15849 920 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 PLEKHG4Q58EX7 1191 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 EFCAB2Q5VUJ9 269 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 EGFLAMQ63HQ2 1017 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 CIAPIN1Q6FI81 312 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 RCSD1Q6JBY9 416 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 ATG14Q6ZNE5 492 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 CHAMP1Q96JM3 812 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 PTCHD1Q96NR3 888 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 PSMD1Q99460 953 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 KCNK12Q9HB15 430 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 SFMBT1Q9UHJ3 866 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 CD2APQ9Y5K6 639 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 TRAPPC8Q9Y2L5 1435 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 REREQ9P2R6 1566 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 SYCP2Q9BX26 1530 aa5.53□□□□□ -1.52
LRRC28-222ENST00000561431 KIDINS220Q9ULH0 1771 aa5.52□□□□□ -1.53
LRRC28-222ENST00000561431 MLH3Q9UHC1 1453 aa5.52□□□□□ -1.53
LRRC28-222ENST00000561431 SUPT6HQ7KZ85 1726 aaKnown RBP5.52□□□□□ -1.53
LRRC28-222ENST00000561431 INO80Q9ULG1 1556 aaPredicted RBP5.52□□□□□ -1.53
LRRC28-222ENST00000561431 MYO1BO43795 1136 aa5.52□□□□□ -1.53
LRRC28-222ENST00000561431 MED14OSP0DP75 135 aa5.52□□□□□ -1.53
LRRC28-222ENST00000561431 HK2P52789 917 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms