RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 FCER1AP12319 257 aa18.1■□□□□ 0.49
AP4E1-205ENST00000561393 DPYDQ12882 1025 aa18.1■□□□□ 0.49
AP4E1-205ENST00000561393 ERCC6LQ2NKX8 1250 aa18.1■□□□□ 0.49
AP4E1-205ENST00000561393 CERS5Q8N5B7 392 aa18.1■□□□□ 0.49
AP4E1-205ENST00000561393 PAGR1Q9BTK6 254 aa18.1■□□□□ 0.49
AP4E1-205ENST00000561393 CCSER1Q9C0I3 900 aa18.1■□□□□ 0.49
AP4E1-205ENST00000561393 CYTH3O43739 400 aa18.1■□□□□ 0.49
AP4E1-205ENST00000561393 EIF2AK2P19525 551 aaKnown RBP18.1■□□□□ 0.49
AP4E1-205ENST00000561393 AP3B2Q13367 1082 aa18.1■□□□□ 0.49
AP4E1-205ENST00000561393 CTTNQ14247 550 aaKnown RBP18.1■□□□□ 0.49
AP4E1-205ENST00000561393 SLC9C1Q4G0N8 1177 aa18.1■□□□□ 0.49
AP4E1-205ENST00000561393 RSBN1LQ6PCB5 846 aaPredicted RBP18.1■□□□□ 0.49
AP4E1-205ENST00000561393 MCF2L2Q86YR7 1114 aa18.1■□□□□ 0.49
AP4E1-205ENST00000561393 SMCR8Q8TEV9 937 aaPredicted RBP18.1■□□□□ 0.49
AP4E1-205ENST00000561393 ZDHHC15Q96MV8 337 aa18.1■□□□□ 0.49
AP4E1-205ENST00000561393 TMEM39BQ9GZU3 492 aa18.1■□□□□ 0.49
AP4E1-205ENST00000561393 NYAP2Q9P242 653 aa18.1■□□□□ 0.49
AP4E1-205ENST00000561393 HARSP12081 509 aaKnown RBP18.09■□□□□ 0.49
AP4E1-205ENST00000561393 FKBP3Q00688 224 aaKnown RBP18.09■□□□□ 0.49
AP4E1-205ENST00000561393 PIGOQ8TEQ8 1089 aa18.09■□□□□ 0.49
AP4E1-205ENST00000561393 LSM14BQ9BX40 385 aaKnown RBP18.09■□□□□ 0.49
AP4E1-205ENST00000561393 XRCC5P13010 732 aaKnown RBP18.09■□□□□ 0.49
AP4E1-205ENST00000561393 NR2F2P24468 414 aa18.09■□□□□ 0.49
AP4E1-205ENST00000561393 BMS1Q14692 1282 aaKnown RBP18.09■□□□□ 0.49
AP4E1-205ENST00000561393 FAM163AQ96GL9 167 aaPredicted RBP18.09■□□□□ 0.49
AP4E1-205ENST00000561393 SFI1A8K8P3 1242 aa18.09■□□□□ 0.49
AP4E1-205ENST00000561393 RASA3Q14644 834 aa18.09■□□□□ 0.49
AP4E1-205ENST00000561393 ZFPM1Q8IX07 1006 aa18.09■□□□□ 0.49
AP4E1-205ENST00000561393 ACRBPQ8NEB7 543 aa18.09■□□□□ 0.49
AP4E1-205ENST00000561393 ZNF70Q9UC06 446 aaPredicted RBP18.09■□□□□ 0.49
AP4E1-205ENST00000561393 ENTPD3O75355 529 aa18.08■□□□□ 0.49
AP4E1-205ENST00000561393 CCDC172P0C7W6 258 aa18.08■□□□□ 0.49
AP4E1-205ENST00000561393 KLHL30Q0D2K2 578 aa18.08■□□□□ 0.49
AP4E1-205ENST00000561393 ODR4Q5SWX8 454 aa18.08■□□□□ 0.49
AP4E1-205ENST00000561393 PPP1R18Q6NYC8 613 aa18.08■□□□□ 0.49
AP4E1-205ENST00000561393 TRIM9Q9C026 710 aa18.08■□□□□ 0.49
AP4E1-205ENST00000561393 CSADQ9Y600 493 aa18.08■□□□□ 0.49
AP4E1-205ENST00000561393 POTEFA5A3E0 1075 aa18.08■□□□□ 0.49
AP4E1-205ENST00000561393 POTEIP0CG38 1075 aa18.08■□□□□ 0.49
AP4E1-205ENST00000561393 PRPHP41219 470 aa18.08■□□□□ 0.49
AP4E1-205ENST00000561393 SMTNP53814 917 aa18.08■□□□□ 0.49
AP4E1-205ENST00000561393 POTEGQ6S5H5 508 aa18.08■□□□□ 0.49
AP4E1-205ENST00000561393 POTEEQ6S8J3 1075 aa18.08■□□□□ 0.49
AP4E1-205ENST00000561393 FAM160B2Q86V87 743 aa18.08■□□□□ 0.49
AP4E1-205ENST00000561393 EMILIN3Q9NT22 766 aa18.08■□□□□ 0.49
AP4E1-205ENST00000561393 CKAP4Q07065 602 aaKnown RBP18.08■□□□□ 0.48
AP4E1-205ENST00000561393 SPP2Q13103 211 aa18.08■□□□□ 0.48
AP4E1-205ENST00000561393 UNC13DQ70J99 1090 aa18.08■□□□□ 0.48
AP4E1-205ENST00000561393 ANKRD13CQ8N6S4 541 aa18.08■□□□□ 0.48
AP4E1-205ENST00000561393 RGS22Q8NE09 1264 aa18.08■□□□□ 0.48
AP4E1-205ENST00000561393 IFIH1Q9BYX4 1025 aaKnown RBP18.08■□□□□ 0.48
AP4E1-205ENST00000561393 PCDHAC2Q9Y5I4 1007 aa18.08■□□□□ 0.48
AP4E1-205ENST00000561393 POLR2FP61218 127 aaKnown RBP18.07■□□□□ 0.48
AP4E1-205ENST00000561393 IRX3P78415 501 aaPredicted RBP18.07■□□□□ 0.48
AP4E1-205ENST00000561393 APOBEC3HQ6NTF7 200 aaKnown RBP18.07■□□□□ 0.48
AP4E1-205ENST00000561393 FAM212AQ96EL1 285 aa18.07■□□□□ 0.48
AP4E1-205ENST00000561393 MPHOSPH6Q99547 160 aaKnown RBP18.07■□□□□ 0.48
AP4E1-205ENST00000561393 CLIC2O15247 247 aa18.07■□□□□ 0.48
AP4E1-205ENST00000561393 MAP9Q49MG5 647 aa18.07■□□□□ 0.48
AP4E1-205ENST00000561393 XKR9Q5GH70 373 aa18.07■□□□□ 0.48
AP4E1-205ENST00000561393 KRT26Q7Z3Y9 468 aa18.07■□□□□ 0.48
AP4E1-205ENST00000561393 USP37Q86T82 979 aa18.07■□□□□ 0.48
AP4E1-205ENST00000561393 SULF1Q8IWU6 871 aa18.07■□□□□ 0.48
AP4E1-205ENST00000561393 LARSQ9P2J5 1176 aaKnown RBP18.07■□□□□ 0.48
AP4E1-205ENST00000561393 POTEB2H3BUK9 544 aa18.07■□□□□ 0.48
AP4E1-205ENST00000561393 PHACTR2O75167 634 aa18.07■□□□□ 0.48
AP4E1-205ENST00000561393 HLTFQ14527 1009 aaKnown RBP eCLIP18.07■□□□□ 0.48
AP4E1-205ENST00000561393 ASIC2Q16515 512 aa18.07■□□□□ 0.48
AP4E1-205ENST00000561393 SFMBT2Q5VUG0 894 aa18.07■□□□□ 0.48
AP4E1-205ENST00000561393 RAVER2Q9HCJ3 691 aaKnown RBP18.07■□□□□ 0.48
AP4E1-205ENST00000561393 SHMT1P34896 483 aa18.06■□□□□ 0.48
AP4E1-205ENST00000561393 EAPPQ56P03 285 aaPredicted RBP18.06■□□□□ 0.48
AP4E1-205ENST00000561393 ANKRD35Q8N283 1001 aa18.06■□□□□ 0.48
AP4E1-205ENST00000561393 RAD54LQ92698 747 aa18.06■□□□□ 0.48
AP4E1-205ENST00000561393 RNASE9P60153 205 aaKnown RBP18.06■□□□□ 0.48
AP4E1-205ENST00000561393 C15orf52Q6ZUT6 534 aaKnown RBP18.06■□□□□ 0.48
AP4E1-205ENST00000561393 SECISBP2LQ93073 1101 aaKnown RBP18.06■□□□□ 0.48
AP4E1-205ENST00000561393 THAP9Q9H5L6 903 aa18.06■□□□□ 0.48
AP4E1-205ENST00000561393 GNA14O95837 355 aa18.06■□□□□ 0.48
AP4E1-205ENST00000561393 POTEJP0CG39 1038 aa18.06■□□□□ 0.48
AP4E1-205ENST00000561393 R3HDM1Q15032 1099 aaKnown RBP18.06■□□□□ 0.48
AP4E1-205ENST00000561393 PRR12Q9ULL5 1215 aa18.06■□□□□ 0.48
AP4E1-205ENST00000561393 MYO6Q9UM54 1294 aa18.06■□□□□ 0.48
AP4E1-205ENST00000561393 MFAP3LO75121 409 aa18.05■□□□□ 0.48
AP4E1-205ENST00000561393 PRPF6O94906 941 aaKnown RBP18.05■□□□□ 0.48
AP4E1-205ENST00000561393 ECE1P42892 770 aa18.05■□□□□ 0.48
AP4E1-205ENST00000561393 HDLBPQ00341 1268 aaKnown RBP18.05■□□□□ 0.48
AP4E1-205ENST00000561393 STK4Q13043 487 aa18.05■□□□□ 0.48
AP4E1-205ENST00000561393 MAN2A1Q16706 1144 aa18.05■□□□□ 0.48
AP4E1-205ENST00000561393 GRIPAP1Q4V328 841 aa18.05■□□□□ 0.48
AP4E1-205ENST00000561393 FAM151AQ8WW52 585 aa18.05■□□□□ 0.48
AP4E1-205ENST00000561393 SPTLC3Q9NUV7 552 aa18.05■□□□□ 0.48
AP4E1-205ENST00000561393 STRCP1A6NGW2 1772 aa18.05■□□□□ 0.48
AP4E1-205ENST00000561393 K7ENM7 598 aa18.05■□□□□ 0.48
AP4E1-205ENST00000561393 MYCNP04198 464 aaPredicted RBP18.05■□□□□ 0.48
AP4E1-205ENST00000561393 IFI16Q16666 785 aaKnown RBP18.05■□□□□ 0.48
AP4E1-205ENST00000561393 FAM102BQ5T8I3 360 aa18.05■□□□□ 0.48
AP4E1-205ENST00000561393 TAF3Q5VWG9 929 aa18.05■□□□□ 0.48
AP4E1-205ENST00000561393 PRAMEF18Q5VWM3 479 aa18.05■□□□□ 0.48
AP4E1-205ENST00000561393 ACER1Q8TDN7 264 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms