RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 FCHSD1Q86WN1 690 aa28.07■■■□□ 2.08
SHF-208ENST00000560734 LENG9Q96B70 501 aa28.07■■■□□ 2.08
SHF-208ENST00000560734 GCOM1H8Y6P7 765 aaPredicted RBP28.06■■■□□ 2.08
SHF-208ENST00000560734 POLR2MP0CAP2 368 aa28.06■■■□□ 2.08
SHF-208ENST00000560734 CCNE1P24864 410 aa28.06■■■□□ 2.08
SHF-208ENST00000560734 DCAF15Q66K64 600 aa28.06■■■□□ 2.08
SHF-208ENST00000560734 CCAR2Q8N163 923 aaKnown RBP28.06■■■□□ 2.08
SHF-208ENST00000560734 ERMNQ8TAM6 284 aa28.06■■■□□ 2.08
SHF-208ENST00000560734 MAP7D2Q96T17 732 aa28.06■■■□□ 2.08
SHF-208ENST00000560734 RABGAP1Q9Y3P9 1069 aa28.06■■■□□ 2.08
SHF-208ENST00000560734 MYMKA6NI61 221 aa28.06■■■□□ 2.08
SHF-208ENST00000560734 TUBB4AP04350 444 aa28.06■■■□□ 2.08
SHF-208ENST00000560734 MCM6Q14566 821 aa28.06■■■□□ 2.08
SHF-208ENST00000560734 HSP90AA4PQ58FG1 418 aa28.06■■■□□ 2.08
SHF-208ENST00000560734 SAMD3Q8N6K7 520 aa28.06■■■□□ 2.08
SHF-208ENST00000560734 KIFC2Q96AC6 838 aa28.06■■■□□ 2.08
SHF-208ENST00000560734 NUDT12Q9BQG2 462 aa28.06■■■□□ 2.08
SHF-208ENST00000560734 KIF2AO00139 706 aaPredicted RBP28.05■■■□□ 2.08
SHF-208ENST00000560734 CCT6AP40227 531 aaKnown RBP28.05■■■□□ 2.08
SHF-208ENST00000560734 SPIRE1Q08AE8 756 aa28.05■■■□□ 2.08
SHF-208ENST00000560734 KRT31Q15323 416 aa28.05■■■□□ 2.08
SHF-208ENST00000560734 KIF4BQ2VIQ3 1234 aa28.05■■■□□ 2.08
SHF-208ENST00000560734 TTI2Q6NXR4 508 aa28.05■■■□□ 2.08
SHF-208ENST00000560734 MTERF4Q7Z6M4 381 aaKnown RBP28.05■■■□□ 2.08
SHF-208ENST00000560734 ZNF341Q9BYN7 854 aa28.05■■■□□ 2.08
SHF-208ENST00000560734 HACL1Q9UJ83 578 aa28.05■■■□□ 2.08
SHF-208ENST00000560734 KCNJ18B7U540 433 aa28.04■■■□□ 2.08
SHF-208ENST00000560734 EGFRP00533 1210 aa28.04■■■□□ 2.08
SHF-208ENST00000560734 GHRHRQ02643 423 aa28.04■■■□□ 2.08
SHF-208ENST00000560734 RASSF7Q02833 373 aa28.04■■■□□ 2.08
SHF-208ENST00000560734 EHHADHQ08426 723 aa28.04■■■□□ 2.08
SHF-208ENST00000560734 KCNJ12Q14500 433 aa28.04■■■□□ 2.08
SHF-208ENST00000560734 PRR16Q569H4 304 aa28.04■■■□□ 2.08
SHF-208ENST00000560734 APOBEC3FQ8IUX4 373 aaKnown RBP28.04■■■□□ 2.08
SHF-208ENST00000560734 PRPF38AQ8NAV1 312 aaKnown RBP28.04■■■□□ 2.08
SHF-208ENST00000560734 P2RX5Q93086 422 aa28.04■■■□□ 2.08
SHF-208ENST00000560734 FEZ1Q99689 392 aa28.04■■■□□ 2.08
SHF-208ENST00000560734 BMP2KQ9NSY1 1161 aaPredicted RBP28.04■■■□□ 2.08
SHF-208ENST00000560734 ICAM1P05362 532 aa28.04■■■□□ 2.08
SHF-208ENST00000560734 ZNF112Q9UJU3 913 aa28.04■■■□□ 2.08
SHF-208ENST00000560734 STX10O60499 249 aa28.03■■■□□ 2.08
SHF-208ENST00000560734 FDX1P10109 184 aa28.03■■■□□ 2.08
SHF-208ENST00000560734 PRELPP51888 382 aa28.03■■■□□ 2.08
SHF-208ENST00000560734 COPB1P53618 953 aaKnown RBP28.03■■■□□ 2.08
SHF-208ENST00000560734 STK4Q13043 487 aa28.03■■■□□ 2.08
SHF-208ENST00000560734 FAM114A1Q8IWE2 563 aa28.03■■■□□ 2.08
SHF-208ENST00000560734 MAP3K20Q9NYL2 800 aaKnown RBP28.03■■■□□ 2.08
SHF-208ENST00000560734 FAM86B1E9PN63 330 aa28.02■■■□□ 2.08
SHF-208ENST00000560734 ARHGAP6O43182 974 aa28.02■■■□□ 2.08
SHF-208ENST00000560734 FAM86B2P0C5J1 330 aa28.02■■■□□ 2.08
SHF-208ENST00000560734 USP14P54578 494 aa28.02■■■□□ 2.08
SHF-208ENST00000560734 NYAP1Q6ZVC0 841 aa28.02■■■□□ 2.08
SHF-208ENST00000560734 SAMD7Q7Z3H4 446 aa28.02■■■□□ 2.08
SHF-208ENST00000560734 LDHDQ86WU2 507 aa28.02■■■□□ 2.08
SHF-208ENST00000560734 GUF1Q8N442 669 aaKnown RBP28.02■■■□□ 2.08
SHF-208ENST00000560734 PANX2Q96RD6 677 aa28.02■■■□□ 2.08
SHF-208ENST00000560734 GLIS2Q9BZE0 524 aaPredicted RBP28.02■■■□□ 2.08
SHF-208ENST00000560734 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.02■■■□□ 2.08
SHF-208ENST00000560734 GJA3Q9Y6H8 435 aa28.02■■■□□ 2.08
SHF-208ENST00000560734 RPA1P27694 616 aa28.01■■■□□ 2.07
SHF-208ENST00000560734 TRIM14Q14142 442 aa28.01■■■□□ 2.07
SHF-208ENST00000560734 CENPPQ6IPU0 288 aa28.01■■■□□ 2.07
SHF-208ENST00000560734 IRF2BP1Q8IU81 584 aa28.01■■■□□ 2.07
SHF-208ENST00000560734 TC2NQ8N9U0 490 aa28.01■■■□□ 2.07
SHF-208ENST00000560734 DDX12PQ92771 950 aa28.01■■■□□ 2.07
SHF-208ENST00000560734 CCDC51Q96ER9 411 aa28.01■■■□□ 2.07
SHF-208ENST00000560734 SLF1Q9BQI6 1058 aa28.01■■■□□ 2.07
SHF-208ENST00000560734 WDR18Q9BV38 432 aa28.01■■■□□ 2.07
SHF-208ENST00000560734 MAPK8IP1Q9UQF2 711 aa28.01■■■□□ 2.07
SHF-208ENST00000560734 PPP2R3BQ9Y5P8 575 aa28.01■■■□□ 2.07
SHF-208ENST00000560734 IGLV3-22A0A075B6J6 115 aa28.01■■■□□ 2.07
SHF-208ENST00000560734 N4BP3O15049 544 aa28.01■■■□□ 2.07
SHF-208ENST00000560734 HOXA13P31271 388 aaPredicted RBP28.01■■■□□ 2.07
SHF-208ENST00000560734 ECM1Q16610 540 aa28.01■■■□□ 2.07
SHF-208ENST00000560734 TBC1D10BQ4KMP7 808 aaPredicted RBP28.01■■■□□ 2.07
SHF-208ENST00000560734 CCDC174Q6PII3 467 aa28.01■■■□□ 2.07
SHF-208ENST00000560734 KCNK18Q7Z418 384 aa28.01■■■□□ 2.07
SHF-208ENST00000560734 TRIM47Q96LD4 638 aa28.01■■■□□ 2.07
SHF-208ENST00000560734 MSH4O15457 936 aa28■■■□□ 2.07
SHF-208ENST00000560734 TEX33O43247 280 aa28■■■□□ 2.07
SHF-208ENST00000560734 ZNF76P36508 570 aa28■■■□□ 2.07
SHF-208ENST00000560734 E4F1Q66K89 784 aaPredicted RBP28■■■□□ 2.07
SHF-208ENST00000560734 PPFIBP1Q86W92 1011 aa28■■■□□ 2.07
SHF-208ENST00000560734 TMEM139Q8IV31 216 aa28■■■□□ 2.07
SHF-208ENST00000560734 DUSP9Q99956 384 aaKnown RBP28■■■□□ 2.07
SHF-208ENST00000560734 NAA15Q9BXJ9 866 aaKnown RBP28■■■□□ 2.07
SHF-208ENST00000560734 MAGEC2Q9UBF1 373 aaPredicted RBP28■■■□□ 2.07
SHF-208ENST00000560734 PAXBP1Q9Y5B6 917 aa28■■■□□ 2.07
SHF-208ENST00000560734 PITPNM2Q9BZ72 1349 aa27.99■■■□□ 2.07
SHF-208ENST00000560734 AKR1B15C9JRZ8 316 aaPredicted RBP27.99■■■□□ 2.07
SHF-208ENST00000560734 CFBP00751 764 aa27.99■■■□□ 2.07
SHF-208ENST00000560734 HSD17B4P51659 736 aa27.99■■■□□ 2.07
SHF-208ENST00000560734 ZYXQ15942 572 aaKnown RBP27.99■■■□□ 2.07
SHF-208ENST00000560734 MCF2L2Q86YR7 1114 aa27.99■■■□□ 2.07
SHF-208ENST00000560734 KIAA0895Q8NCT3 520 aa27.99■■■□□ 2.07
SHF-208ENST00000560734 DNAJC19Q96DA6 116 aa27.99■■■□□ 2.07
SHF-208ENST00000560734 POLR3CQ9BUI4 534 aaPredicted RBP27.99■■■□□ 2.07
SHF-208ENST00000560734 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.99■■■□□ 2.07
SHF-208ENST00000560734 FGFR1OPO95684 399 aaKnown RBP27.98■■■□□ 2.07
SHF-208ENST00000560734 INPP5BP32019 993 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms