RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 ERC1Q8IUD2 1116 aa7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 TRMT44Q8IYL2 757 aaKnown RBP7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 MYCT1Q8N699 235 aa7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 TDRD7Q8NHU6 1098 aaKnown RBP7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 FAM210AQ96ND0 272 aa7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 FAM107BQ9H098 131 aa7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 KLHL11Q9NVR0 708 aa7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 TRMT1Q9NXH9 659 aaKnown RBP7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 ZNF891A8MT65 544 aaPredicted RBP7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 J3KRW8 73 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 PRKD3O94806 890 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 FAM200BP0CF97 657 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 NCAM1P13591 858 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 LTKP29376 864 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 HNRNPH1P31943 449 aaKnown RBP7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 FXR1P51114 621 aaKnown RBP eCLIP7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 TYRO3Q06418 890 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 SNW1Q13573 536 aaKnown RBP7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 ZC3H12AQ5D1E8 599 aaKnown RBP7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 SLFN12Q8IYM2 578 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 MICALL1Q8N3F8 863 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 KCT2Q8NC54 265 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 ARMC2Q8NEN0 867 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 GIMAP7Q8NHV1 300 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 SSH1Q8WYL5 1049 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 PAWRQ96IZ0 340 aaKnown RBP7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 PLEKHF1Q96S99 279 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 CBX8Q9HC52 389 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 ZFYVE28Q9HCC9 887 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 CEP72Q9P209 647 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 AFG3L2Q9Y4W6 797 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 ROBO2Q9HCK4 1378 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 EFCAB8A8MWE9 144 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 H3BQF6 201 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 CBFA2T2O43439 604 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 PPFIA3O75145 1194 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 CCZ1BP86790 482 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 CCZ1P86791 482 aaPredicted RBP7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 SLC6A19Q695T7 634 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 TTLL5Q6EMB2 1281 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 CWC27Q6UX04 472 aaKnown RBP7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 COL23A1Q86Y22 540 aaPredicted RBP7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 CMTR1Q8N1G2 835 aaKnown RBP7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 NXPE1Q8N323 547 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 SYNPOQ8N3V7 929 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 ZNF280CQ8ND82 737 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 SNX29Q8TEQ0 813 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 HSH2DQ96JZ2 352 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 ESYT1Q9BSJ8 1104 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 RUSC1Q9BVN2 902 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 FUT8Q9BYC5 575 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 MAN1C1Q9NR34 630 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 ZNF69Q9UC07 566 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 JAG2Q9Y219 1238 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 RTL1A6NKG5 1358 aa7.55□□□□□ -1.2
TSPAN3-209ENST00000560715 H3BRJ5 948 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 M0R3H8 397 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 ENC1O14682 589 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 IPO8O15397 1037 aaKnown RBP7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 TADA3O75528 432 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 RFPL1O75677 317 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 ACPPP15309 386 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 CAPN3P20807 821 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 CEBPAP49715 358 aaPredicted RBP7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 CLK1P49759 484 aaKnown RBP7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 CASP7P55210 303 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 HTRA3P83110 453 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 ZNF252P-AS1Q0IIN9 211 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 WASHC5Q12768 1159 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 CCDC30Q5VVM6 783 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 NECAB2Q7Z6G3 386 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 SPATS2Q86XZ4 545 aaKnown RBP7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 NKAPQ8N5F7 415 aaKnown RBP7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 ST13P5Q8NFI4 369 aaPredicted RBP7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 KAT2BQ92831 832 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 GPKOWQ92917 476 aaPredicted RBP eCLIP7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 CHRDQ9H2X0 955 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 ARFGAP3Q9NP61 516 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 KCNQ5Q9NR82 932 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 IFT80Q9P2H3 777 aaPredicted RBP7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 PCDHB3Q9Y5E6 796 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 DNAJC25-GNG10A0A024R161 153 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 CTAGE5O15320 804 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 ERLIN2O94905 339 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 ATP1A3P13637 1013 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 ZNF280AP59817 542 aaPredicted RBP7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 CDC37Q16543 378 aaPredicted RBP7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 NAIF1Q69YI7 327 aaPredicted RBP7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 GBP6Q6ZN66 633 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 TBC1D1Q86TI0 1168 aaPredicted RBP7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 NDUFAF2Q8N183 169 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 THEMISQ8N1K5 641 aaPredicted RBP7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 MGARPQ8TDB4 240 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 ATXN2LQ8WWM7 1075 aaKnown RBP7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 PPP1R14AQ96A00 147 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 TBCBQ99426 244 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 MTFR1LQ9H019 292 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 EHD4Q9H223 541 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 ZNRF3Q9ULT6 936 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms