RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 TSPY2A6NKD2 308 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 MEFVO15553 781 aaPredicted RBP5.68□□□□□ -1.5
LRRC49-221ENST00000560107 ORC4O43929 436 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 TNFRSF8P28908 595 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 LSP1P33241 339 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 GUCY2FP51841 1108 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 NAP1L1P55209 391 aaKnown RBP5.68□□□□□ -1.5
LRRC49-221ENST00000560107 GUCY2DQ02846 1103 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 PPARDQ03181 441 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 TRADDQ15628 312 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 ZKSCAN8Q15776 578 aaPredicted RBP5.68□□□□□ -1.5
LRRC49-221ENST00000560107 CCDC152Q4G0S7 254 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 B4GALNT4Q76KP1 1039 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 CCDC91Q7Z6B0 441 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 ANKRD23Q86SG2 305 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 CCDC155Q8N6L0 562 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 PRPF38AQ8NAV1 312 aaKnown RBP5.68□□□□□ -1.5
LRRC49-221ENST00000560107 NDST4Q9H3R1 872 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 EPB41L5Q9HCM4 733 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 GDF3Q9NR23 364 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 A0A1B0GUL6 1792 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 ITGB4P16144 1822 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 H0YHG0 523 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 KIAA0754O94854 1291 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 HEXIM1O94992 359 aaKnown RBP5.68□□□□□ -1.5
LRRC49-221ENST00000560107 PCP11498 1178 aaKnown RBP5.68□□□□□ -1.5
LRRC49-221ENST00000560107 KIF5BP33176 963 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 IL6STP40189 918 aaPredicted RBP5.68□□□□□ -1.5
LRRC49-221ENST00000560107 SLC1A4P43007 532 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 SEC24CP53992 1094 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 RNASE9P60153 205 aaKnown RBP5.68□□□□□ -1.5
LRRC49-221ENST00000560107 SLC35G1Q2M3R5 365 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 CFAP221Q4G0U5 840 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 KDM7AQ6ZMT4 941 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 HEATR3Q7Z4Q2 680 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 IFT20Q8IY31 132 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 CCDC47Q96A33 483 aaKnown RBP5.68□□□□□ -1.5
LRRC49-221ENST00000560107 C7orf25Q9BPX7 421 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 DCP1AQ9NPI6 582 aaPredicted RBP5.68□□□□□ -1.5
LRRC49-221ENST00000560107 TCP11L1Q9NUJ3 509 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 CEP83Q9Y592 693 aa5.68□□□□□ -1.5
LRRC49-221ENST00000560107 ZNF804BA4D1E1 1349 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 COL22A1Q8NFW1 1626 aaPredicted RBP5.67□□□□□ -1.5
LRRC49-221ENST00000560107 TESPA1A2RU30 521 aaPredicted RBP5.67□□□□□ -1.5
LRRC49-221ENST00000560107 A6NNZ2 444 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 PJA2O43164 708 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 FTCDO95954 541 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 NR1D1P20393 614 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 TECP42680 631 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 GSCP56915 257 aaPredicted RBP5.67□□□□□ -1.5
LRRC49-221ENST00000560107 ASTE1Q2TB18 679 aaPredicted RBP5.67□□□□□ -1.5
LRRC49-221ENST00000560107 LETM2Q2VYF4 491 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 TUBB8Q3ZCM7 444 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 GLE1Q53GS7 698 aaKnown RBP5.67□□□□□ -1.5
LRRC49-221ENST00000560107 NAA35Q5VZE5 725 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 CENPPQ6IPU0 288 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 SDR16C5Q8N3Y7 309 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 ZNF473Q8WTR7 871 aaKnown RBP5.67□□□□□ -1.5
LRRC49-221ENST00000560107 CASKIN2Q8WXE0 1202 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 BAP1Q92560 729 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 NOX5Q96PH1 765 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 KRT12Q99456 494 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 EPN3Q9H201 632 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 SH3GLB2Q9NR46 395 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 IL17RBQ9NRM6 502 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 STK24Q9Y6E0 443 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 CYTH3O43739 400 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 CCNT1O60563 726 aaKnown RBP5.67□□□□□ -1.5
LRRC49-221ENST00000560107 PALMO75781 387 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 PPP1R37O75864 691 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 FSBPO95073 299 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 USP8P40818 1118 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 PRPHP41219 470 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 HDLBPQ00341 1268 aaKnown RBP5.67□□□□□ -1.5
LRRC49-221ENST00000560107 TFAP4Q01664 338 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 PAK2Q13177 524 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 PTGISQ16647 500 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 MAN2A1Q16706 1144 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 RNF187Q5TA31 235 aaPredicted RBP5.67□□□□□ -1.5
LRRC49-221ENST00000560107 HGSNATQ68CP4 663 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 CNNM4Q6P4Q7 775 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 PDXDC1Q6P996 788 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 DYMQ7RTS9 669 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 CACNA2D4Q7Z3S7 1137 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 CADPS2Q86UW7 1296 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 PNMA1Q8ND90 353 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 NSUN4Q96CB9 384 aaKnown RBP5.67□□□□□ -1.5
LRRC49-221ENST00000560107 FAM84BQ96KN1 310 aaPredicted RBP5.67□□□□□ -1.5
LRRC49-221ENST00000560107 CALR3Q96L12 384 aaKnown RBP5.67□□□□□ -1.5
LRRC49-221ENST00000560107 CCT8L2Q96SF2 557 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 MMTAG2Q9BU76 263 aaKnown RBP5.67□□□□□ -1.5
LRRC49-221ENST00000560107 CPVLQ9H3G5 476 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 CUEDC2Q9H467 287 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 NLRC4Q9NPP4 1024 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 MAD2L2Q9UI95 211 aa5.67□□□□□ -1.5
LRRC49-221ENST00000560107 PACSIN2Q9UNF0 486 aaPredicted RBP5.67□□□□□ -1.5
LRRC49-221ENST00000560107 ATXN2Q99700 1313 aaKnown RBP5.66□□□□□ -1.5
LRRC49-221ENST00000560107 MYMKA6NI61 221 aa5.66□□□□□ -1.5
LRRC49-221ENST00000560107 STXBP3O00186 592 aa5.66□□□□□ -1.5
LRRC49-221ENST00000560107 LAD1O00515 517 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms