RNA–Protein interactions for RNA: ENST00000560097.1

AC104041.1-202, humanhuman

TSL 4 BASIC

Gene AC104041.1, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104041.1-202ENST00000560097 RAG1P15918 1043 aa13.55□□□□□ -0.24
AC104041.1-202ENST00000560097 FPGSQ05932 587 aa13.55□□□□□ -0.24
AC104041.1-202ENST00000560097 PGM5Q15124 567 aa13.55□□□□□ -0.24
AC104041.1-202ENST00000560097 PPP2R5BQ15173 497 aa13.55□□□□□ -0.24
AC104041.1-202ENST00000560097 NBPF20Q3BBV1 942 aa13.55□□□□□ -0.24
AC104041.1-202ENST00000560097 MFSD5Q6N075 450 aa13.55□□□□□ -0.24
AC104041.1-202ENST00000560097 SEPT14Q6ZU15 432 aa13.55□□□□□ -0.24
AC104041.1-202ENST00000560097 RALYLQ86SE5 291 aaKnown RBP13.55□□□□□ -0.24
AC104041.1-202ENST00000560097 SCFD2Q8WU76 684 aa13.55□□□□□ -0.24
AC104041.1-202ENST00000560097 WNT8BQ93098 351 aa13.55□□□□□ -0.24
AC104041.1-202ENST00000560097 FAM161BQ96MY7 647 aa13.55□□□□□ -0.24
AC104041.1-202ENST00000560097 SPZ1Q9BXG8 430 aa13.55□□□□□ -0.24
AC104041.1-202ENST00000560097 AP5M1Q9H0R1 490 aa13.55□□□□□ -0.24
AC104041.1-202ENST00000560097 DDX41Q9UJV9 622 aaKnown RBP13.55□□□□□ -0.24
AC104041.1-202ENST00000560097 PNMA6FA0A0J9YX94 578 aa13.54□□□□□ -0.24
AC104041.1-202ENST00000560097 MEIS2O14770 477 aa13.54□□□□□ -0.24
AC104041.1-202ENST00000560097 SORBS3O60504 671 aa13.54□□□□□ -0.24
AC104041.1-202ENST00000560097 DDAH1O94760 285 aa13.54□□□□□ -0.24
AC104041.1-202ENST00000560097 MYL3P08590 195 aa13.54□□□□□ -0.24
AC104041.1-202ENST00000560097 HOXD8P13378 290 aaPredicted RBP13.54□□□□□ -0.24
AC104041.1-202ENST00000560097 TRDNQ13061 729 aa13.54□□□□□ -0.24
AC104041.1-202ENST00000560097 NSUN6Q8TEA1 469 aaKnown RBP13.54□□□□□ -0.24
AC104041.1-202ENST00000560097 SCLYQ96I15 445 aa13.54□□□□□ -0.24
AC104041.1-202ENST00000560097 SPC25Q9HBM1 224 aa13.54□□□□□ -0.24
AC104041.1-202ENST00000560097 PRKAG2Q9UGJ0 569 aa13.54□□□□□ -0.24
AC104041.1-202ENST00000560097 CNTNAP5Q8WYK1 1306 aa13.54□□□□□ -0.24
AC104041.1-202ENST00000560097 VCANP13611 3396 aa13.54□□□□□ -0.24
AC104041.1-202ENST00000560097 SIP14410 1827 aa13.53□□□□□ -0.24
AC104041.1-202ENST00000560097 PBX2P40425 430 aa13.53□□□□□ -0.24
AC104041.1-202ENST00000560097 CCL23P55773 120 aa13.53□□□□□ -0.24
AC104041.1-202ENST00000560097 TSGA10IPQ3SY00 556 aa13.53□□□□□ -0.24
AC104041.1-202ENST00000560097 TRAF7Q6Q0C0 670 aa13.53□□□□□ -0.24
AC104041.1-202ENST00000560097 USP17L6PQ6QN14 398 aa13.53□□□□□ -0.24
AC104041.1-202ENST00000560097 ZNF365Q70YC5 407 aa13.53□□□□□ -0.24
AC104041.1-202ENST00000560097 VSIG10LQ86VR7 867 aa13.53□□□□□ -0.24
AC104041.1-202ENST00000560097 SGMS1Q86VZ5 419 aa13.53□□□□□ -0.24
AC104041.1-202ENST00000560097 VTI1AQ96AJ9 217 aa13.53□□□□□ -0.24
AC104041.1-202ENST00000560097 MAP3K14Q99558 947 aa13.53□□□□□ -0.24
AC104041.1-202ENST00000560097 OSBPL7Q9BZF2 842 aa13.53□□□□□ -0.24
AC104041.1-202ENST00000560097 MAF1Q9H063 256 aa13.53□□□□□ -0.24
AC104041.1-202ENST00000560097 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
AC104041.1-202ENST00000560097 PNMA2Q9UL42 364 aa13.53□□□□□ -0.24
AC104041.1-202ENST00000560097 SPTBN5Q9NRC6 3674 aaKnown RBP13.52□□□□□ -0.24
AC104041.1-202ENST00000560097 HAS3O00219 553 aa13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 CDC45O75419 566 aa13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 CABYRO75952 493 aa13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 ARHGEF15O94989 841 aa13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 ZNF286BP0CG31 522 aa13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 UBA1P22314 1058 aaKnown RBP13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 CDC27P30260 824 aa13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 LIFRP42702 1097 aa13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 HSDL1Q3SXM5 330 aa13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 ARHGEF16Q5VV41 709 aa13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 GDF6Q6KF10 455 aaPredicted RBP13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 APOA5Q6Q788 366 aa13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 TMTC3Q6ZXV5 915 aa13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 RNPC3Q96LT9 517 aaKnown RBP13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 IWS1Q96ST2 819 aa13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 MTG1Q9BT17 334 aaPredicted RBP13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 MTA3Q9BTC8 594 aa13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 HIPK3Q9H422 1215 aa13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 MROH7Q68CQ1 1323 aa13.52□□□□□ -0.25
AC104041.1-202ENST00000560097 NKRFO15226 690 aaKnown RBP eCLIP13.51□□□□□ -0.25
AC104041.1-202ENST00000560097 MYCLP12524 364 aaPredicted RBP13.51□□□□□ -0.25
AC104041.1-202ENST00000560097 MCM5P33992 734 aa13.51□□□□□ -0.25
AC104041.1-202ENST00000560097 SMAD3P84022 425 aaKnown RBP13.51□□□□□ -0.25
AC104041.1-202ENST00000560097 ZNF200P98182 395 aaPredicted RBP13.51□□□□□ -0.25
AC104041.1-202ENST00000560097 TTLL4Q14679 1199 aa13.51□□□□□ -0.25
AC104041.1-202ENST00000560097 STXBP2Q15833 593 aa13.51□□□□□ -0.25
AC104041.1-202ENST00000560097 UBE2SQ16763 222 aa13.51□□□□□ -0.25
AC104041.1-202ENST00000560097 TRIM71Q2Q1W2 868 aaKnown RBP13.51□□□□□ -0.25
AC104041.1-202ENST00000560097 MYSM1Q5VVJ2 828 aa13.51□□□□□ -0.25
AC104041.1-202ENST00000560097 CATIPQ7Z7H3 387 aa13.51□□□□□ -0.25
AC104041.1-202ENST00000560097 FCHSD1Q86WN1 690 aa13.51□□□□□ -0.25
AC104041.1-202ENST00000560097 MCF2L2Q86YR7 1114 aa13.51□□□□□ -0.25
AC104041.1-202ENST00000560097 EMID1Q96A84 441 aaPredicted RBP13.51□□□□□ -0.25
AC104041.1-202ENST00000560097 TMEM87BQ96K49 555 aa13.51□□□□□ -0.25
AC104041.1-202ENST00000560097 SNX14Q9Y5W7 946 aa13.51□□□□□ -0.25
AC104041.1-202ENST00000560097 EIF3JO75822 258 aaKnown RBP13.5□□□□□ -0.25
AC104041.1-202ENST00000560097 GH1P01241 217 aa13.5□□□□□ -0.25
AC104041.1-202ENST00000560097 CPT1AP50416 773 aa13.5□□□□□ -0.25
AC104041.1-202ENST00000560097 MICU3Q86XE3 530 aa13.5□□□□□ -0.25
AC104041.1-202ENST00000560097 CCDC82Q8N4S0 544 aa13.5□□□□□ -0.25
AC104041.1-202ENST00000560097 INPP4AQ96PE3 977 aaPredicted RBP13.5□□□□□ -0.25
AC104041.1-202ENST00000560097 C16orf70Q9BSU1 422 aa13.5□□□□□ -0.25
AC104041.1-202ENST00000560097 SEMA6BQ9H3T3 888 aa13.5□□□□□ -0.25
AC104041.1-202ENST00000560097 IL23AQ9NPF7 189 aa13.5□□□□□ -0.25
AC104041.1-202ENST00000560097 POLR3EQ9NVU0 708 aa13.5□□□□□ -0.25
AC104041.1-202ENST00000560097 YBX2Q9Y2T7 364 aaKnown RBP13.5□□□□□ -0.25
AC104041.1-202ENST00000560097 ERICH2A1L162 156 aa13.49□□□□□ -0.25
AC104041.1-202ENST00000560097 GCOM1H8Y6P7 765 aaPredicted RBP13.49□□□□□ -0.25
AC104041.1-202ENST00000560097 F2P00734 622 aa13.49□□□□□ -0.25
AC104041.1-202ENST00000560097 POLR2MP0CAP2 368 aa13.49□□□□□ -0.25
AC104041.1-202ENST00000560097 MBTPS1Q14703 1052 aa13.49□□□□□ -0.25
AC104041.1-202ENST00000560097 CELF3Q5SZQ8 465 aaKnown RBP13.49□□□□□ -0.25
AC104041.1-202ENST00000560097 WWC2Q6AWC2 1192 aa13.49□□□□□ -0.25
AC104041.1-202ENST00000560097 CASC1Q6TDU7 716 aa13.49□□□□□ -0.25
AC104041.1-202ENST00000560097 SPRED2Q7Z698 418 aa13.49□□□□□ -0.25
AC104041.1-202ENST00000560097 FANCBQ8NB91 859 aa13.49□□□□□ -0.25
AC104041.1-202ENST00000560097 HERVK_113Q902F9 699 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms