RNA–Protein interactions for RNA: ENST00000560046.1

DCAF11-227, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 3

Gene DCAF11, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-227ENST00000560046 USP17L15C9J2P7 530 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 USP17L13C9JLJ4 530 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 USP17L11C9JVI0 530 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 USP17L18D6R9N7 530 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 USP17L22D6RA61 530 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 USP17L17D6RBQ6 530 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 USP17L19D6RCP7 530 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 USP17L20D6RJB6 530 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 PSMA7O14818 248 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 TBX3O15119 743 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 EEF1GP26641 437 aaKnown RBP11.9□□□□□ -0.5
DCAF11-227ENST00000560046 CIITAP33076 1130 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 SOX10P56693 466 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 ASIC1P78348 528 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 CXCL9Q07325 125 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 PDE4DQ08499 809 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 USP17L24Q0WX57 530 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 KCNJ12Q14500 433 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 Q4G0T1 1027 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 TCP11X2Q5H9J9 407 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 KRT79Q5XKE5 535 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 CEP135Q66GS9 1140 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 FOXR2Q6PJQ5 311 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 USP17L6PQ6QN14 398 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 UNC13DQ70J99 1090 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 SNX29Q8TEQ0 813 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 LARP4BQ92615 738 aaKnown RBP11.9□□□□□ -0.5
DCAF11-227ENST00000560046 CCDC51Q96ER9 411 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 NUP88Q99567 741 aaPredicted RBP11.9□□□□□ -0.5
DCAF11-227ENST00000560046 DUSP9Q99956 384 aaKnown RBP11.9□□□□□ -0.5
DCAF11-227ENST00000560046 EXOC1Q9NV70 894 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 PRR12Q9ULL5 1215 aa11.9□□□□□ -0.5
DCAF11-227ENST00000560046 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
DCAF11-227ENST00000560046 KDM3AQ9Y4C1 1321 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 CASP8AP2Q9UKL3 1982 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 SCN4AP35499 1836 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 BICDL2A1A5D9 508 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 IQCA1LA6NCM1 817 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 POTEMA6NI47 508 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 MYMKA6NI61 221 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 AKR1B15C9JRZ8 316 aaPredicted RBP11.89□□□□□ -0.51
DCAF11-227ENST00000560046 PIK3CDO00329 1044 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 OPLAHO14841 1288 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 CTIFO43310 598 aaKnown RBP11.89□□□□□ -0.51
DCAF11-227ENST00000560046 CA12O43570 354 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 CYP3A4P08684 503 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 SREBF1P36956 1147 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 EHHADHQ08426 723 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 GOLGA8FQ08AF8 430 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 GOLGA8DPQ0D2H9 430 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 TRIM14Q14142 442 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 MCM6Q14566 821 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 PTPN21Q16825 1174 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 CIAPIN1Q6FI81 312 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 REXO1L1PQ8IX06 675 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 P2RX5Q93086 422 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 CDK5RAP3Q96JB5 506 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 P2RX7Q99572 595 aaKnown RBP11.89□□□□□ -0.51
DCAF11-227ENST00000560046 BAG1Q99933 345 aaPredicted RBP11.89□□□□□ -0.51
DCAF11-227ENST00000560046 NUDT12Q9BQG2 462 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 NAA15Q9BXJ9 866 aaKnown RBP11.89□□□□□ -0.51
DCAF11-227ENST00000560046 GOPCQ9HD26 462 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 TRMT1Q9NXH9 659 aaKnown RBP11.89□□□□□ -0.51
DCAF11-227ENST00000560046 TSKSQ9UJT2 592 aa11.89□□□□□ -0.51
DCAF11-227ENST00000560046 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.89□□□□□ -0.51
DCAF11-227ENST00000560046 RBBP6Q7Z6E9 1792 aaKnown RBP11.89□□□□□ -0.51
DCAF11-227ENST00000560046 A0A1W2PQC6 194 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 NFKBIEO00221 500 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 ZSCAN12O43309 604 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 RAD21O60216 631 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 CAP2P40123 477 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 ECE1P42892 770 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 PMS1P54277 932 aaKnown RBP11.88□□□□□ -0.51
DCAF11-227ENST00000560046 ZNF280AP59817 542 aaPredicted RBP11.88□□□□□ -0.51
DCAF11-227ENST00000560046 ARHGAP4P98171 946 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 STK4Q13043 487 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 PSMD2Q13200 908 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 SYCP1Q15431 976 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 HABP4Q5JVS0 413 aaKnown RBP11.88□□□□□ -0.51
DCAF11-227ENST00000560046 KIAA1755Q5JYT7 1200 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 CENPPQ6IPU0 288 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 KCNK18Q7Z418 384 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 FAM160B2Q86V87 743 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 PPFIBP1Q86W92 1011 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 SLFN12Q8IYM2 578 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 ETNPPLQ8TBG4 499 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 ACER1Q8TDN7 264 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 NT5C3AQ9H0P0 336 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 RANBP17Q9H2T7 1088 aaKnown RBP11.88□□□□□ -0.51
DCAF11-227ENST00000560046 SH2D4AQ9H788 454 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 VCPKMTQ9H867 229 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 GINM1Q9NU53 330 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 ABT1Q9ULW3 272 aaKnown RBP11.88□□□□□ -0.51
DCAF11-227ENST00000560046 PCDHA12Q9UN75 941 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 STK24Q9Y6E0 443 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 PARP14Q460N5 1801 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 LOXHD1Q8IVV2 1947 aa11.88□□□□□ -0.51
DCAF11-227ENST00000560046 LTBP3Q9NS15 1303 aa11.87□□□□□ -0.51
DCAF11-227ENST00000560046 TRIM49BA6NDI0 452 aa11.87□□□□□ -0.51
DCAF11-227ENST00000560046 LGALS16A8MUM7 142 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms