RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 USP17L15C9J2P7 530 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 USP17L13C9JLJ4 530 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 USP17L11C9JVI0 530 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 USP17L18D6R9N7 530 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 USP17L22D6RA61 530 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 USP17L17D6RBQ6 530 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 USP17L19D6RCP7 530 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 USP17L20D6RJB6 530 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 CLK2P49760 499 aaKnown RBP11.17□□□□□ -0.62
LRRC28-216ENST00000559819 USP17L24Q0WX57 530 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 COBLL1Q53SF7 1204 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 USP17L6PQ6QN14 398 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 C2CD5Q86YS7 1000 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 EIF3CQ99613 913 aaKnown RBP11.17□□□□□ -0.62
LRRC28-216ENST00000559819 NPHP3-ACAD11A0A0J9YXS1 232 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 MARCH6O60337 910 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 N4BP1O75113 896 aaKnown RBP11.17□□□□□ -0.62
LRRC28-216ENST00000559819 CYP2C19P33261 490 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 SNAP25P60880 206 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 LRRC55Q6ZSA7 311 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 RETREG2Q8NC44 543 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 NEK11Q8NG66 645 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 HNRNPLLQ8WVV9 542 aaKnown RBP11.17□□□□□ -0.62
LRRC28-216ENST00000559819 ZC3H12CQ9C0D7 883 aaKnown RBP11.17□□□□□ -0.62
LRRC28-216ENST00000559819 MLXIPQ9HAP2 919 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 ARHGAP20Q9P2F6 1191 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 ATP6V0A2Q9Y487 856 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 SAR1BQ9Y6B6 198 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 LTBP1Q14766 1721 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 FOCADQ5VW36 1801 aa11.17□□□□□ -0.62
LRRC28-216ENST00000559819 PVALEFA0A1B0GWK0 134 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 E9PMD0 336 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 KRT86O43790 486 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 TAL1P17542 331 aaPredicted RBP11.16□□□□□ -0.62
LRRC28-216ENST00000559819 PPP1R2P41236 205 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 RAD51AP2Q09MP3 1159 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 TCP10Q12799 353 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 PDIA5Q14554 519 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 APOBEC3HQ6NTF7 200 aaKnown RBP11.16□□□□□ -0.62
LRRC28-216ENST00000559819 GUF1Q8N442 669 aaKnown RBP11.16□□□□□ -0.62
LRRC28-216ENST00000559819 CUL5Q93034 780 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 CCDC42Q96M95 316 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 DNAJC18Q9H819 358 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 L1RE1Q9UN81 338 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 EP400Q96L91 3159 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 A0A1W2PQJ5 194 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 KLRG2A4D1S0 409 aaPredicted RBP11.16□□□□□ -0.62
LRRC28-216ENST00000559819 LRRC53A6NM62 1247 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 TRIM37O94972 964 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 STAT3P40763 770 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 COASYQ13057 564 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 MAN2A1Q16706 1144 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 PAPD7Q5XG87 772 aaKnown RBP11.16□□□□□ -0.62
LRRC28-216ENST00000559819 CCDC170Q8IYT3 715 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 DNAJC19Q96DA6 116 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 DRC1Q96MC2 740 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 RAB34Q9BZG1 259 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 PSTPIP2Q9H939 334 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 SWAP70Q9UH65 585 aa11.16□□□□□ -0.62
LRRC28-216ENST00000559819 PDE2AO00408 941 aaPredicted RBP11.15□□□□□ -0.62
LRRC28-216ENST00000559819 ZBTB5O15062 677 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 ERLIN1O75477 346 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 ZMYND10O75800 440 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 IPO7O95373 1038 aaKnown RBP11.15□□□□□ -0.62
LRRC28-216ENST00000559819 EIF4A3P38919 411 aaKnown RBP11.15□□□□□ -0.62
LRRC28-216ENST00000559819 VAV2P52735 878 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 EHHADHQ08426 723 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 FIGNQ5HY92 759 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 PPP4R3AQ6IN85 833 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 PPP1R18Q6NYC8 613 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 RRAGAQ7L523 313 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 HDXQ7Z353 690 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 TANGO6Q9C0B7 1094 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 KANSL2Q9H9L4 492 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 CAPN6Q9Y6Q1 641 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 POTEB3A0JP26 581 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 POTECB2RU33 542 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 USP14P54578 494 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 APBA1Q02410 837 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 QRICH1Q2TAL8 776 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 POTEBQ6S5H4 581 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 NELFCDQ8IXH7 590 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 SECISBP2LQ93073 1101 aaKnown RBP11.15□□□□□ -0.62
LRRC28-216ENST00000559819 PURBQ96QR8 312 aaKnown RBP11.15□□□□□ -0.62
LRRC28-216ENST00000559819 HINFPQ9BQA5 517 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 DBNDD1Q9H9R9 158 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 KIAA1024Q9UPX6 916 aa11.15□□□□□ -0.62
LRRC28-216ENST00000559819 MOCS3O95396 460 aa11.15□□□□□ -0.63
LRRC28-216ENST00000559819 HLA-DOAP06340 250 aa11.15□□□□□ -0.63
LRRC28-216ENST00000559819 KIF11P52732 1056 aa11.15□□□□□ -0.63
LRRC28-216ENST00000559819 MRPL12P52815 198 aaKnown RBP11.15□□□□□ -0.63
LRRC28-216ENST00000559819 C2orf54Q08AI8 447 aa11.15□□□□□ -0.63
LRRC28-216ENST00000559819 KIF5AQ12840 1032 aa11.15□□□□□ -0.63
LRRC28-216ENST00000559819 CASP8Q14790 479 aa11.15□□□□□ -0.63
LRRC28-216ENST00000559819 ZNF662Q6ZS27 426 aa11.15□□□□□ -0.63
LRRC28-216ENST00000559819 GSPT2Q8IYD1 628 aaKnown RBP11.15□□□□□ -0.63
LRRC28-216ENST00000559819 CAGE1Q8TC20 777 aa11.15□□□□□ -0.63
LRRC28-216ENST00000559819 PANK4Q9NVE7 773 aa11.15□□□□□ -0.63
LRRC28-216ENST00000559819 PCDHA12Q9UN75 941 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms