RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 TNPO2O14787 897 aaKnown RBP11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 VIL1P09327 827 aaKnown RBP11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 PDXDC2PQ6P474 469 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 CDAN1Q8IWY9 1227 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 GBA2Q9HCG7 927 aaPredicted RBP11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 LZTFL1Q9NQ48 299 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 USP54Q70EL1 1684 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 ABCC6O95255 1503 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 CCDC172P0C7W6 258 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 PPP2R3AQ06190 1150 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 RESTQ13127 1097 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 SPDYE2Q495Y8 402 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 TRMT44Q8IYL2 757 aaKnown RBP11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 SLC7A3Q8WY07 619 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 CEP170P1Q96L14 293 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 NOC4LQ9BVI4 516 aaKnown RBP11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 ANAPC4Q9UJX5 808 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 RCOR1Q9UKL0 485 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 NFE2L3Q9Y4A8 694 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 PCDHB13Q9Y5F0 798 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 LRRC37A3O60309 1634 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 ABCB11O95342 1321 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 FAM208AQ9UK61 1670 aaKnown RBP11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 FAM83AQ86UY5 434 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 DDX4Q9NQI0 724 aaKnown RBP11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 KIAA1468Q9P260 1216 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 KCNG1Q9UIX4 513 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 TCRBV5S4A2TA0A5A2 114 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 CCDC175P0C221 793 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 RHOXF2BP0C7M4 288 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 NEK11Q8NG66 645 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 FAM163AQ96GL9 167 aaPredicted RBP11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 RHOXF2Q9BQY4 288 aa11.78□□□□□ -0.52
CARMIL3-202ENST00000559694 ADM5C9JUS6 153 aa11.77□□□□□ -0.52
CARMIL3-202ENST00000559694 MMP14P50281 582 aa11.77□□□□□ -0.52
CARMIL3-202ENST00000559694 MTMR1Q13613 665 aa11.77□□□□□ -0.52
CARMIL3-202ENST00000559694 ZBTB8OSQ8IWT0 167 aa11.77□□□□□ -0.52
CARMIL3-202ENST00000559694 CEP112Q8N8E3 955 aa11.77□□□□□ -0.52
CARMIL3-202ENST00000559694 EEF2KMTQ96G04 330 aa11.77□□□□□ -0.52
CARMIL3-202ENST00000559694 PLCD4Q9BRC7 762 aa11.77□□□□□ -0.52
CARMIL3-202ENST00000559694 SPZ1Q9BXG8 430 aa11.77□□□□□ -0.52
CARMIL3-202ENST00000559694 SYNCQ9H7C4 482 aa11.77□□□□□ -0.52
CARMIL3-202ENST00000559694 COL4A3BPQ9Y5P4 624 aa11.77□□□□□ -0.52
CARMIL3-202ENST00000559694 CALUO43852 315 aaPredicted RBP11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 PPP6R2O75170 966 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 CETN2P41208 172 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 BAATQ14032 418 aaPredicted RBP11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 ODR4Q5SWX8 454 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 C15orf52Q6ZUT6 534 aaKnown RBP11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 ZFPM1Q8IX07 1006 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 TTC16Q8NEE8 873 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 MMP19Q99542 508 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 SLC39A2Q9NP94 309 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 GPRC5DQ9NZD1 345 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 PCDHAC2Q9Y5I4 1007 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 PDS5AQ29RF7 1337 aaKnown RBP11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 STK36Q9NRP7 1315 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 A0A087WWV3 80 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 MARK3P27448 753 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 OAS2P29728 719 aaKnown RBP11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 RAPGEF1Q13905 1077 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 MIS18BP1Q6P0N0 1132 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 CLEC17AQ6ZS10 378 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 ERO1BQ86YB8 467 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 LARP4BQ92615 738 aaKnown RBP11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 ATG4CQ96DT6 458 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 AK8Q96MA6 479 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 PANK4Q9NVE7 773 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 ZSCAN26Q16670 478 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 MTERF2Q49AM1 385 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 FAM26FQ5R3K3 315 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 LRRC8AQ8IWT6 810 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 EPSTI1Q96J88 318 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 NACC1Q96RE7 527 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 NBPF3Q9H094 633 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 PCDHA5Q9Y5H7 936 aa11.77□□□□□ -0.53
CARMIL3-202ENST00000559694 LMO7Q8WWI1 1683 aa11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 CETPP11597 493 aa11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 NLRP12P59046 1061 aa11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 CACNB1Q02641 598 aaPredicted RBP11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 AHDC1Q5TGY3 1603 aaPredicted RBP11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 A0A1W2PQ27 194 aa11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 A0A1W2PQ64 194 aa11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 A0A1W2PQD8 194 aa11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 MACROD2A1Z1Q3 448 aa11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 CYP2J2P51589 502 aa11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 TRPC3Q13507 836 aa11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 MYOCDQ8IZQ8 938 aa11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 NELFBQ8WX92 580 aa11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 IWS1Q96ST2 819 aa11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 ALDH8A1Q9H2A2 487 aaPredicted RBP11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 FZD1Q9UP38 647 aa11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 CTAGE9A4FU28 777 aa11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 K7ENM7 598 aa11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 NBPF11Q86T75 865 aa11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 CACTINQ8WUQ7 758 aaKnown RBP11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 SYNRGQ9UMZ2 1314 aa11.76□□□□□ -0.53
CARMIL3-202ENST00000559694 GTPBP6O43824 516 aaPredicted RBP11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 TROAPQ12815 778 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms