RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 TMTC1Q8IUR5 882 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 OGFOD1Q8N543 542 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 ZNF397Q8NF99 534 aaPredicted RBP12.35□□□□□ -0.43
SPG11-217ENST00000559511 UIMC1Q96RL1 719 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 TUBGCP2Q9BSJ2 902 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 CARD6Q9BX69 1037 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 TMOD2Q9NZR1 351 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 PCDHA1Q9Y5I3 950 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 A0A1W2PQC6 194 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 ABL1P00519 1130 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 SNAP25P60880 206 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 MAP3K9P80192 1104 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 SPDYE2Q495Y8 402 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 KRT79Q5XKE5 535 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 UNC13DQ70J99 1090 aa12.35□□□□□ -0.43
SPG11-217ENST00000559511 CNOT6LQ96LI5 555 aaKnown RBP12.35□□□□□ -0.43
SPG11-217ENST00000559511 F5H6K3 240 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 SOCS7O14512 581 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 GH2P01242 217 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 CXCL9Q07325 125 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 KLRC3Q07444 240 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 DALRD3Q5D0E6 543 aaKnown RBP12.34□□□□□ -0.43
SPG11-217ENST00000559511 CYP26C1Q6V0L0 522 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 CCDC125Q86Z20 511 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 AGBL3Q8NEM8 1001 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 FAM151AQ8WW52 585 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 P2RX7Q99572 595 aaKnown RBP12.34□□□□□ -0.43
SPG11-217ENST00000559511 CHP1Q99653 195 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 MRFAP1Q9Y605 127 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 PVALEFA0A1B0GWK0 134 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 RASSF10A6NK89 507 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 MEIS2O14770 477 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 TADA3O75528 432 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 GCFC2P16383 781 aaKnown RBP12.34□□□□□ -0.43
SPG11-217ENST00000559511 PPP1R2P41236 205 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 KLK7P49862 253 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 DNM2P50570 870 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 CBX1P83916 185 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 MIIPQ5JXC2 388 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 RBM26Q5T8P6 1007 aaKnown RBP12.34□□□□□ -0.43
SPG11-217ENST00000559511 CENPPQ6IPU0 288 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 MTMR14Q8NCE2 650 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 MNS1Q8NEH6 495 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 MTFR1LQ9H019 292 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.34□□□□□ -0.43
SPG11-217ENST00000559511 HERC5Q9UII4 1024 aaKnown RBP12.34□□□□□ -0.43
SPG11-217ENST00000559511 PCDHA12Q9UN75 941 aa12.34□□□□□ -0.43
SPG11-217ENST00000559511 NDUFB10O96000 172 aa12.33□□□□□ -0.44
SPG11-217ENST00000559511 TAL1P17542 331 aaPredicted RBP12.33□□□□□ -0.44
SPG11-217ENST00000559511 POLD1P28340 1107 aa12.33□□□□□ -0.44
SPG11-217ENST00000559511 EHHADHQ08426 723 aa12.33□□□□□ -0.44
SPG11-217ENST00000559511 GLIS3Q8NEA6 775 aa12.33□□□□□ -0.44
SPG11-217ENST00000559511 GMCL1P1Q8NEA9 526 aa12.33□□□□□ -0.44
SPG11-217ENST00000559511 DDX12PQ92771 950 aa12.33□□□□□ -0.44
SPG11-217ENST00000559511 DNAJC7Q99615 494 aa12.33□□□□□ -0.44
SPG11-217ENST00000559511 ANO3Q9BYT9 981 aa12.33□□□□□ -0.44
SPG11-217ENST00000559511 GTPBP4Q9BZE4 634 aaKnown RBP12.33□□□□□ -0.44
SPG11-217ENST00000559511 TTYH3Q9C0H2 523 aa12.33□□□□□ -0.44
SPG11-217ENST00000559511 CAPN11Q9UMQ6 739 aa12.33□□□□□ -0.44
SPG11-217ENST00000559511 IDEP14735 1019 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 H2AFXP16104 143 aaPredicted RBP12.32□□□□□ -0.44
SPG11-217ENST00000559511 MTIF2P46199 727 aaKnown RBP12.32□□□□□ -0.44
SPG11-217ENST00000559511 GLIPR1L2Q4G1C9 344 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 ARHGAP29Q52LW3 1261 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 WDR59Q6PJI9 974 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 FAM114A1Q8IWE2 563 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 OR8K1Q8NGG5 319 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 ZBED3Q96IU2 234 aaPredicted RBP12.32□□□□□ -0.44
SPG11-217ENST00000559511 SLF1Q9BQI6 1058 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 GLT8D2Q9H1C3 349 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 AGPAT5Q9NUQ2 364 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 LUC7L2Q9Y383 392 aaKnown RBP12.32□□□□□ -0.44
SPG11-217ENST00000559511 REXO2Q9Y3B8 237 aaKnown RBP12.32□□□□□ -0.44
SPG11-217ENST00000559511 A0A1W2PRG0 241 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 KIF5CO60282 957 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 MARCH6O60337 910 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 ARHGAP25P42331 645 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 TBC1D8BQ0IIM8 1120 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 FKBP1CQ5VVH2 108 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 CDAN1Q8IWY9 1227 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 CRYGNQ8WXF5 182 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 UBXN4Q92575 508 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 DNAJC19Q96DA6 116 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 GMCL1Q96IK5 515 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 FEZ1Q99689 392 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 NOC4LQ9BVI4 516 aaKnown RBP12.32□□□□□ -0.44
SPG11-217ENST00000559511 TAOK3Q9H2K8 898 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 VEZTQ9HBM0 779 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 KCNMB3Q9NPA1 279 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 ZNF446Q9NWS9 450 aa12.32□□□□□ -0.44
SPG11-217ENST00000559511 DDX41Q9UJV9 622 aaKnown RBP12.32□□□□□ -0.44
SPG11-217ENST00000559511 CYP3A7-CYP3A51PA0A087WV96 503 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 EFCAB8A8MWE9 144 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 NFKBIEO00221 500 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 CYP3A7P24462 503 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 USP11P51784 963 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 PPP2R3AQ06190 1150 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 USH1GQ495M9 461 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 ZNF569Q5MCW4 686 aa12.31□□□□□ -0.44
SPG11-217ENST00000559511 HYIQ5T013 277 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms