RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 ERMNQ8TAM6 284 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 ZNF507Q8TCN5 953 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 DUSP9Q99956 384 aaKnown RBP12.6□□□□□ -0.39
CLPX-204ENST00000559152 TUBGCP2Q9BSJ2 902 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 SH2D4AQ9H788 454 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 KCNMB3Q9NPA1 279 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 ZNF70Q9UC06 446 aaPredicted RBP12.6□□□□□ -0.39
CLPX-204ENST00000559152 ABCB11O95342 1321 aa12.59□□□□□ -0.39
CLPX-204ENST00000559152 TBC1D12O60347 775 aa12.59□□□□□ -0.39
CLPX-204ENST00000559152 CASQ1P31415 396 aa12.59□□□□□ -0.39
CLPX-204ENST00000559152 ARHGAP4P98171 946 aa12.59□□□□□ -0.39
CLPX-204ENST00000559152 ANKRD40Q6AI12 368 aa12.59□□□□□ -0.39
CLPX-204ENST00000559152 KCTD17Q8N5Z5 321 aa12.59□□□□□ -0.39
CLPX-204ENST00000559152 MTMR14Q8NCE2 650 aa12.59□□□□□ -0.39
CLPX-204ENST00000559152 AGBL3Q8NEM8 1001 aa12.59□□□□□ -0.39
CLPX-204ENST00000559152 GMLQ99445 158 aa12.59□□□□□ -0.39
CLPX-204ENST00000559152 TSG101Q99816 390 aa12.59□□□□□ -0.39
CLPX-204ENST00000559152 ZNF215Q9UL58 517 aaPredicted RBP12.59□□□□□ -0.39
CLPX-204ENST00000559152 ADGRG1Q9Y653 693 aa12.59□□□□□ -0.39
CLPX-204ENST00000559152 SOWAHDA6NJG2 315 aa12.58□□□□□ -0.39
CLPX-204ENST00000559152 TCP10L2B9ZVM9 353 aa12.58□□□□□ -0.39
CLPX-204ENST00000559152 PIK3CDO00329 1044 aa12.58□□□□□ -0.39
CLPX-204ENST00000559152 KIF20AO95235 890 aa12.58□□□□□ -0.39
CLPX-204ENST00000559152 FCER1AP12319 257 aa12.58□□□□□ -0.39
CLPX-204ENST00000559152 PRKCSHP14314 528 aaPredicted RBP12.58□□□□□ -0.39
CLPX-204ENST00000559152 KRT9P35527 623 aa12.58□□□□□ -0.39
CLPX-204ENST00000559152 STAT2P52630 851 aa12.58□□□□□ -0.39
CLPX-204ENST00000559152 GNG11P61952 73 aa12.58□□□□□ -0.39
CLPX-204ENST00000559152 SPDYE2Q495Y8 402 aa12.58□□□□□ -0.39
CLPX-204ENST00000559152 FKBP15Q5T1M5 1219 aa12.58□□□□□ -0.39
CLPX-204ENST00000559152 KIAA0895Q8NCT3 520 aa12.58□□□□□ -0.39
CLPX-204ENST00000559152 OR8K1Q8NGG5 319 aa12.58□□□□□ -0.39
CLPX-204ENST00000559152 CRYGNQ8WXF5 182 aa12.58□□□□□ -0.39
CLPX-204ENST00000559152 DDX12PQ92771 950 aa12.58□□□□□ -0.39
CLPX-204ENST00000559152 FAM20AQ96MK3 541 aa12.58□□□□□ -0.39
CLPX-204ENST00000559152 TMX2Q9Y320 296 aa12.58□□□□□ -0.39
CLPX-204ENST00000559152 LUC7L2Q9Y383 392 aaKnown RBP12.58□□□□□ -0.39
CLPX-204ENST00000559152 PSMD14O00487 310 aa12.58□□□□□ -0.4
CLPX-204ENST00000559152 PES1O00541 588 aaKnown RBP12.58□□□□□ -0.4
CLPX-204ENST00000559152 SREBF1P36956 1147 aa12.58□□□□□ -0.4
CLPX-204ENST00000559152 MTIF2P46199 727 aaKnown RBP12.58□□□□□ -0.4
CLPX-204ENST00000559152 SHROOM1Q2M3G4 852 aaPredicted RBP12.58□□□□□ -0.4
CLPX-204ENST00000559152 FAM83AQ86UY5 434 aa12.58□□□□□ -0.4
CLPX-204ENST00000559152 CHURC1Q8WUH1 139 aa12.58□□□□□ -0.4
CLPX-204ENST00000559152 CNOT6LQ96LI5 555 aaKnown RBP12.58□□□□□ -0.4
CLPX-204ENST00000559152 SLC39A2Q9NP94 309 aa12.58□□□□□ -0.4
CLPX-204ENST00000559152 ZNRF3Q9ULT6 936 aa12.58□□□□□ -0.4
CLPX-204ENST00000559152 CAPN11Q9UMQ6 739 aa12.58□□□□□ -0.4
CLPX-204ENST00000559152 KIF5CO60282 957 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 RAD17O75943 681 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 IDEP14735 1019 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 CIITAP33076 1130 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 RAD9BQ6WBX8 426 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 DYMQ7RTS9 669 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 CCDC65Q8IXS2 484 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 NIM1KQ8IY84 436 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 NUDT12Q9BQG2 462 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 NOC4LQ9BVI4 516 aaKnown RBP12.57□□□□□ -0.4
CLPX-204ENST00000559152 PRR12Q9ULL5 1215 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 PLA2G6O60733 806 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 URI1O94763 535 aaPredicted RBP12.57□□□□□ -0.4
CLPX-204ENST00000559152 CYP3A4P08684 503 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 EHHADHQ08426 723 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 TBC1D8BQ0IIM8 1120 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 TUBB2AQ13885 445 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 FIGNQ5HY92 759 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 ZNF397Q8NF99 534 aaPredicted RBP12.57□□□□□ -0.4
CLPX-204ENST00000559152 DNAJC7Q99615 494 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 TUBB2BQ9BVA1 445 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 ZNHIT6Q9NWK9 470 aaKnown RBP12.57□□□□□ -0.4
CLPX-204ENST00000559152 MYO1AQ9UBC5 1043 aa12.57□□□□□ -0.4
CLPX-204ENST00000559152 A0A1W2PRG0 241 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 USH1GQ495M9 461 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 FAM160B2Q86V87 743 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 MYOCDQ8IZQ8 938 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 MNS1Q8NEH6 495 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 DESI2Q9BSY9 194 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 SEMA6BQ9H3T3 888 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 EHMT1Q9H9B1 1298 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 ZNF277Q9NRM2 450 aaPredicted RBP12.56□□□□□ -0.4
CLPX-204ENST00000559152 PANK4Q9NVE7 773 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 ZBTB21Q9ULJ3 1066 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 KIAA1024Q9UPX6 916 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 PSME4Q14997 1843 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 PITPNM2Q9BZ72 1349 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 A0A1W2PQJ5 194 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 CLRN2A0PK11 232 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 B4DLN1 442 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 PLA2G4BP0C869 781 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 DPEP1P16444 411 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 TRIM21P19474 475 aaKnown RBP12.56□□□□□ -0.4
CLPX-204ENST00000559152 MTF1Q14872 753 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 ARHGAP29Q52LW3 1261 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 PRR16Q569H4 304 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 CCDC84Q86UT8 332 aaPredicted RBP12.56□□□□□ -0.4
CLPX-204ENST00000559152 ETNPPLQ8TBG4 499 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 ERGIC2Q96RQ1 377 aa12.56□□□□□ -0.4
CLPX-204ENST00000559152 CCDC94Q9BW85 323 aaPredicted RBP12.56□□□□□ -0.4
CLPX-204ENST00000559152 TTC26A0AVF1 554 aa12.55□□□□□ -0.4
CLPX-204ENST00000559152 KCNA3P22001 575 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms