RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 ADCK5Q3MIX3 580 aa24.79■■□□□ 1.56
CRNDE-205ENST00000558952 FAM47CQ5HY64 1035 aa24.79■■□□□ 1.56
CRNDE-205ENST00000558952 KCNV1Q6PIU1 500 aa24.79■■□□□ 1.56
CRNDE-205ENST00000558952 SMARCC2Q8TAQ2 1214 aa24.79■■□□□ 1.56
CRNDE-205ENST00000558952 TCEANC2Q96MN5 208 aa24.79■■□□□ 1.56
CRNDE-205ENST00000558952 DDX41Q9UJV9 622 aaKnown RBP24.79■■□□□ 1.56
CRNDE-205ENST00000558952 B4GALT4O60513 344 aa24.78■■□□□ 1.56
CRNDE-205ENST00000558952 SUPT20HL2P0C7V6 817 aa24.78■■□□□ 1.56
CRNDE-205ENST00000558952 EXOSC10Q01780 885 aaKnown RBP24.78■■□□□ 1.56
CRNDE-205ENST00000558952 APOA5Q6Q788 366 aa24.78■■□□□ 1.56
CRNDE-205ENST00000558952 TMTC3Q6ZXV5 915 aa24.78■■□□□ 1.56
CRNDE-205ENST00000558952 VSIG10LQ86VR7 867 aa24.78■■□□□ 1.56
CRNDE-205ENST00000558952 CCDC82Q8N4S0 544 aa24.78■■□□□ 1.56
CRNDE-205ENST00000558952 AFG1LQ8WV93 481 aa24.78■■□□□ 1.56
CRNDE-205ENST00000558952 RNPC3Q96LT9 517 aaKnown RBP24.78■■□□□ 1.56
CRNDE-205ENST00000558952 TRPV6Q9H1D0 765 aa24.78■■□□□ 1.56
CRNDE-205ENST00000558952 ALDH8A1Q9H2A2 487 aaPredicted RBP24.78■■□□□ 1.56
CRNDE-205ENST00000558952 HIPK3Q9H422 1215 aa24.78■■□□□ 1.56
CRNDE-205ENST00000558952 RBM28Q9NW13 759 aaKnown RBP24.78■■□□□ 1.56
CRNDE-205ENST00000558952 MMP3P08254 477 aa24.77■■□□□ 1.56
CRNDE-205ENST00000558952 EPHB4P54760 987 aa24.77■■□□□ 1.56
CRNDE-205ENST00000558952 DHX37Q8IY37 1157 aaKnown RBP24.77■■□□□ 1.56
CRNDE-205ENST00000558952 BAZ2BQ9UIF8 2168 aaKnown RBP24.76■■□□□ 1.55
CRNDE-205ENST00000558952 ZBTB43O43298 467 aa24.76■■□□□ 1.55
CRNDE-205ENST00000558952 CASTP20810 708 aaKnown RBP24.76■■□□□ 1.55
CRNDE-205ENST00000558952 CHMP4BP1P59074 171 aa24.76■■□□□ 1.55
CRNDE-205ENST00000558952 LAMC2Q13753 1193 aa24.76■■□□□ 1.55
CRNDE-205ENST00000558952 NBPF20Q3BBV1 942 aa24.76■■□□□ 1.55
CRNDE-205ENST00000558952 DEFB123Q8N688 67 aa24.76■■□□□ 1.55
CRNDE-205ENST00000558952 IL31RAQ8NI17 732 aa24.76■■□□□ 1.55
CRNDE-205ENST00000558952 EMID1Q96A84 441 aaPredicted RBP24.76■■□□□ 1.55
CRNDE-205ENST00000558952 KIAA1217Q5T5P2 1943 aa24.76■■□□□ 1.55
CRNDE-205ENST00000558952 STAM2O75886 525 aa24.75■■□□□ 1.55
CRNDE-205ENST00000558952 CYP2C18P33260 490 aa24.75■■□□□ 1.55
CRNDE-205ENST00000558952 HSPA4P34932 840 aa24.75■■□□□ 1.55
CRNDE-205ENST00000558952 DGKDQ16760 1214 aa24.75■■□□□ 1.55
CRNDE-205ENST00000558952 RTN1Q16799 776 aa24.75■■□□□ 1.55
CRNDE-205ENST00000558952 GNPTABQ3T906 1256 aa24.75■■□□□ 1.55
CRNDE-205ENST00000558952 NFRKBQ6P4R8 1299 aa24.75■■□□□ 1.55
CRNDE-205ENST00000558952 PPP4R2Q9NY27 417 aa24.75■■□□□ 1.55
CRNDE-205ENST00000558952 NAP1L2Q9ULW6 460 aaPredicted RBP24.75■■□□□ 1.55
CRNDE-205ENST00000558952 KLF18A0A0U1RQI7 1052 aa24.74■■□□□ 1.55
CRNDE-205ENST00000558952 PIK3CDO00329 1044 aa24.74■■□□□ 1.55
CRNDE-205ENST00000558952 RGS20O76081 388 aa24.74■■□□□ 1.55
CRNDE-205ENST00000558952 TGFB3P10600 412 aa24.74■■□□□ 1.55
CRNDE-205ENST00000558952 CSF2RAP15509 400 aa24.74■■□□□ 1.55
CRNDE-205ENST00000558952 PTPN11Q06124 597 aaPredicted RBP24.74■■□□□ 1.55
CRNDE-205ENST00000558952 USP17L6PQ6QN14 398 aa24.74■■□□□ 1.55
CRNDE-205ENST00000558952 JAKMIP1Q96N16 626 aaKnown RBP24.74■■□□□ 1.55
CRNDE-205ENST00000558952 PSTPIP2Q9H939 334 aa24.74■■□□□ 1.55
CRNDE-205ENST00000558952 TRMT13Q9NUP7 481 aaKnown RBP24.74■■□□□ 1.55
CRNDE-205ENST00000558952 FRMPD4Q14CM0 1322 aa24.73■■□□□ 1.55
CRNDE-205ENST00000558952 hCG_1642624A0A1W2PR95 340 aa24.73■■□□□ 1.55
CRNDE-205ENST00000558952 GOLGA8AA7E2F4 631 aa24.73■■□□□ 1.55
CRNDE-205ENST00000558952 GOLGA8BA8MQT2 603 aa24.73■■□□□ 1.55
CRNDE-205ENST00000558952 ERICH6BQ5W0A0 696 aa24.73■■□□□ 1.55
CRNDE-205ENST00000558952 BLOC1S2Q6QNY1 142 aa24.73■■□□□ 1.55
CRNDE-205ENST00000558952 HEATR3Q7Z4Q2 680 aa24.73■■□□□ 1.55
CRNDE-205ENST00000558952 PPTC7Q8NI37 304 aa24.73■■□□□ 1.55
CRNDE-205ENST00000558952 KCNB2Q92953 911 aa24.73■■□□□ 1.55
CRNDE-205ENST00000558952 ZFP91Q96JP5 570 aaPredicted RBP24.73■■□□□ 1.55
CRNDE-205ENST00000558952 NOC4LQ9BVI4 516 aaKnown RBP24.73■■□□□ 1.55
CRNDE-205ENST00000558952 BRPF3Q9ULD4 1205 aa24.73■■□□□ 1.55
CRNDE-205ENST00000558952 SNX14Q9Y5W7 946 aa24.73■■□□□ 1.55
CRNDE-205ENST00000558952 LAMA3Q16787 3333 aa24.73■■□□□ 1.55
CRNDE-205ENST00000558952 PSRC1Q6PGN9 363 aaPredicted RBP24.72■■□□□ 1.55
CRNDE-205ENST00000558952 Q7L0L9 218 aa24.72■■□□□ 1.55
CRNDE-205ENST00000558952 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.72■■□□□ 1.55
CRNDE-205ENST00000558952 KATNAL1Q9BW62 490 aa24.72■■□□□ 1.55
CRNDE-205ENST00000558952 NOD1Q9Y239 953 aa24.72■■□□□ 1.55
CRNDE-205ENST00000558952 MEIS2O14770 477 aa24.71■■□□□ 1.55
CRNDE-205ENST00000558952 GGPS1O95749 300 aa24.71■■□□□ 1.55
CRNDE-205ENST00000558952 CENPBP07199 599 aaPredicted RBP24.71■■□□□ 1.55
CRNDE-205ENST00000558952 PSMA5P28066 241 aa24.71■■□□□ 1.55
CRNDE-205ENST00000558952 RCAN1P53805 252 aa24.71■■□□□ 1.55
CRNDE-205ENST00000558952 CCL23P55773 120 aa24.71■■□□□ 1.55
CRNDE-205ENST00000558952 SMAD3P84022 425 aaKnown RBP24.71■■□□□ 1.55
CRNDE-205ENST00000558952 CELF3Q5SZQ8 465 aaKnown RBP24.71■■□□□ 1.55
CRNDE-205ENST00000558952 SPATA33Q96N06 139 aa24.71■■□□□ 1.55
CRNDE-205ENST00000558952 MLXIPQ9HAP2 919 aa24.71■■□□□ 1.55
CRNDE-205ENST00000558952 IL23AQ9NPF7 189 aa24.71■■□□□ 1.55
CRNDE-205ENST00000558952 SZT2Q5T011 3432 aa24.71■■□□□ 1.55
CRNDE-205ENST00000558952 UMODL1Q5DID0 1318 aa24.7■■□□□ 1.54
CRNDE-205ENST00000558952 CNTNAP5Q8WYK1 1306 aa24.7■■□□□ 1.54
CRNDE-205ENST00000558952 SORBS3O60504 671 aa24.7■■□□□ 1.54
CRNDE-205ENST00000558952 CYP2C9P11712 490 aa24.7■■□□□ 1.54
CRNDE-205ENST00000558952 UBA1P22314 1058 aaKnown RBP24.7■■□□□ 1.54
CRNDE-205ENST00000558952 MRPS9P82933 396 aaKnown RBP24.7■■□□□ 1.54
CRNDE-205ENST00000558952 ZNF697Q5TEC3 545 aa24.7■■□□□ 1.54
CRNDE-205ENST00000558952 MYSM1Q5VVJ2 828 aa24.7■■□□□ 1.54
CRNDE-205ENST00000558952 FAM109BQ6ICB4 259 aaPredicted RBP24.7■■□□□ 1.54
CRNDE-205ENST00000558952 XRRA1Q6P2D8 792 aa24.7■■□□□ 1.54
CRNDE-205ENST00000558952 Q6ZUG5 572 aa24.7■■□□□ 1.54
CRNDE-205ENST00000558952 PPP1R13LQ8WUF5 828 aa24.7■■□□□ 1.54
CRNDE-205ENST00000558952 GPKOWQ92917 476 aaPredicted RBP eCLIP24.7■■□□□ 1.545e-7■□□□□ 9.3
CRNDE-205ENST00000558952 SCN10AQ9Y5Y9 1956 aa24.69■■□□□ 1.54
CRNDE-205ENST00000558952 SPDYE3A6NKU9 549 aa24.69■■□□□ 1.54
CRNDE-205ENST00000558952 ACRP10323 421 aa24.69■■□□□ 1.54
CRNDE-205ENST00000558952 CPA1P15085 419 aa24.69■■□□□ 1.54
CRNDE-205ENST00000558952 TMEM240Q5SV17 173 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms