RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 ELP1O95163 1332 aa11.83□□□□□ -0.52
TPM1-212ENST00000558347 RBM47A0AV96 593 aaKnown RBP11.82□□□□□ -0.52
TPM1-212ENST00000558347 ERICH2A1L162 156 aa11.82□□□□□ -0.52
TPM1-212ENST00000558347 SH2B2O14492 632 aaPredicted RBP11.82□□□□□ -0.52
TPM1-212ENST00000558347 OPLAHO14841 1288 aa11.82□□□□□ -0.52
TPM1-212ENST00000558347 FAAP100Q0VG06 881 aa11.82□□□□□ -0.52
TPM1-212ENST00000558347 SART3Q15020 963 aaKnown RBP11.82□□□□□ -0.52
TPM1-212ENST00000558347 FSCN1Q16658 493 aaKnown RBP11.82□□□□□ -0.52
TPM1-212ENST00000558347 LRIT3Q3SXY7 679 aa11.82□□□□□ -0.52
TPM1-212ENST00000558347 DUSP28Q4G0W2 176 aa11.82□□□□□ -0.52
TPM1-212ENST00000558347 TMEM67Q5HYA8 995 aa11.82□□□□□ -0.52
TPM1-212ENST00000558347 ANKRD33Q7Z3H0 272 aa11.82□□□□□ -0.52
TPM1-212ENST00000558347 FAM184AQ8NB25 1140 aa11.82□□□□□ -0.52
TPM1-212ENST00000558347 TAAR1Q96RJ0 339 aa11.82□□□□□ -0.52
TPM1-212ENST00000558347 LRRC2Q9BYS8 371 aa11.82□□□□□ -0.52
TPM1-212ENST00000558347 ZBTB5O15062 677 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 CYTH3O43739 400 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 LARGE1O95461 756 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 CDK7P50613 346 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 PDE4DQ08499 809 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 ME3Q16798 604 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 UVSSAQ2YD98 709 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 SGMS1Q86VZ5 419 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 TMTC2Q8N394 836 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 SYTL5Q8TDW5 730 aaPredicted RBP11.81□□□□□ -0.52
TPM1-212ENST00000558347 VTI1AQ96AJ9 217 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 TOX2Q96NM4 488 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 PIGSQ96S52 555 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 AMNQ9BXJ7 453 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 WDR11Q9BZH6 1224 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 AP5M1Q9H0R1 490 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 TSPY26PQ9H489 355 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 LY9Q9HBG7 655 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 SMC3Q9UQE7 1217 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 MRPL11Q9Y3B7 192 aaKnown RBP11.81□□□□□ -0.52
TPM1-212ENST00000558347 Q9Y3F1 56 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 BAZ2BQ9UIF8 2168 aaKnown RBP11.81□□□□□ -0.52
TPM1-212ENST00000558347 A0A0U1RQG5 324 aaPredicted RBP11.81□□□□□ -0.52
TPM1-212ENST00000558347 SYCE3A1L190 88 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 ARVCFO00192 962 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 KIAA0355O15063 1070 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 STX6O43752 255 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 PFKFB2O60825 505 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 MSNP26038 577 aaKnown RBP11.81□□□□□ -0.52
TPM1-212ENST00000558347 APOBRQ0VD83 1088 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 CXCL17Q6UXB2 119 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 HOMER1Q86YM7 354 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 MCF2L2Q86YR7 1114 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 MYL10Q9BUA6 226 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 MAF1Q9H063 256 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 RIOX1Q9H6W3 641 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 TMEM39AQ9NV64 488 aa11.81□□□□□ -0.52
TPM1-212ENST00000558347 DCDC2CA8MYV0 355 aa11.8□□□□□ -0.52
TPM1-212ENST00000558347 F13A1P00488 732 aa11.8□□□□□ -0.52
TPM1-212ENST00000558347 CFBP00751 764 aa11.8□□□□□ -0.52
TPM1-212ENST00000558347 PDIA3P30101 505 aaKnown RBP11.8□□□□□ -0.52
TPM1-212ENST00000558347 RCAN1P53805 252 aa11.8□□□□□ -0.52
TPM1-212ENST00000558347 UBE2HP62256 183 aa11.8□□□□□ -0.52
TPM1-212ENST00000558347 C9orf50Q5SZB4 431 aa11.8□□□□□ -0.52
TPM1-212ENST00000558347 CCDC183Q5T5S1 534 aa11.8□□□□□ -0.52
TPM1-212ENST00000558347 CATIPQ7Z7H3 387 aa11.8□□□□□ -0.52
TPM1-212ENST00000558347 ZNF654Q8IZM8 581 aa11.8□□□□□ -0.52
TPM1-212ENST00000558347 SLC43A3Q8NBI5 491 aa11.8□□□□□ -0.52
TPM1-212ENST00000558347 COPS5Q92905 334 aa11.8□□□□□ -0.52
TPM1-212ENST00000558347 MPHOSPH6Q99547 160 aaKnown RBP11.8□□□□□ -0.52
TPM1-212ENST00000558347 LARP6Q9BRS8 491 aaKnown RBP11.8□□□□□ -0.52
TPM1-212ENST00000558347 CCDC39Q9UFE4 941 aa11.8□□□□□ -0.52
TPM1-212ENST00000558347 NOL7Q9UMY1 257 aaKnown RBP11.8□□□□□ -0.52
TPM1-212ENST00000558347 PCDHA1Q9Y5I3 950 aa11.8□□□□□ -0.52
TPM1-212ENST00000558347 GRIN2DO15399 1336 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 MROH7Q68CQ1 1323 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 NID2Q14112 1375 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 KIAA1217Q5T5P2 1943 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 KLF18A0A0U1RQI7 1052 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 ARIH2O95376 493 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 TPM2P07951 284 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 RAG1P15918 1043 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 SYT1P21579 422 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 HSD17B4P51659 736 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 TERF1P54274 439 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 EPHB4P54760 987 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 PSMC6P62333 389 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 GHRHRQ02643 423 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 ST3GAL1Q11201 340 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 PPP2R5BQ15173 497 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 FOXD4L5Q5VV16 416 aaPredicted RBP11.79□□□□□ -0.52
TPM1-212ENST00000558347 FAM126BQ8IXS8 530 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 OR6J1Q8NGC5 347 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 NSUN6Q8TEA1 469 aaKnown RBP11.79□□□□□ -0.52
TPM1-212ENST00000558347 FOXD4L4Q8WXT5 416 aaPredicted RBP11.79□□□□□ -0.52
TPM1-212ENST00000558347 GTF3C6Q969F1 213 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 NAP1L5Q96NT1 182 aaPredicted RBP11.79□□□□□ -0.52
TPM1-212ENST00000558347 RMDN3Q96TC7 470 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 TBX21Q9UL17 535 aa11.79□□□□□ -0.52
TPM1-212ENST00000558347 B4DLN1 442 aa11.78□□□□□ -0.52
TPM1-212ENST00000558347 ZNF500O60304 480 aaPredicted RBP11.78□□□□□ -0.52
TPM1-212ENST00000558347 ZEB2O60315 1214 aa11.78□□□□□ -0.52
TPM1-212ENST00000558347 CABYRO75952 493 aa11.78□□□□□ -0.52
TPM1-212ENST00000558347 DDAH1O94760 285 aa11.78□□□□□ -0.52
TPM1-212ENST00000558347 CD4P01730 458 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms