RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 PRPF6O94906 941 aaKnown RBP12.74□□□□□ -0.37
CSPG4P12-201ENST00000558282 TRPC1P48995 793 aa12.74□□□□□ -0.37
CSPG4P12-201ENST00000558282 DPH6Q7L8W6 267 aa12.74□□□□□ -0.37
CSPG4P12-201ENST00000558282 CRLF3Q8IUI8 442 aa12.74□□□□□ -0.37
CSPG4P12-201ENST00000558282 HNRNPLLQ8WVV9 542 aaKnown RBP12.74□□□□□ -0.37
CSPG4P12-201ENST00000558282 DNAJC9Q8WXX5 260 aa12.74□□□□□ -0.37
CSPG4P12-201ENST00000558282 PAWRQ96IZ0 340 aaKnown RBP12.74□□□□□ -0.37
CSPG4P12-201ENST00000558282 LSG1Q9H089 658 aaKnown RBP12.74□□□□□ -0.37
CSPG4P12-201ENST00000558282 MRPL44Q9H9J2 332 aaKnown RBP12.74□□□□□ -0.37
CSPG4P12-201ENST00000558282 MAN1B1Q9UKM7 699 aa12.74□□□□□ -0.37
CSPG4P12-201ENST00000558282 ARL2BPQ9Y2Y0 163 aa12.74□□□□□ -0.37
CSPG4P12-201ENST00000558282 ARHGEF35A5YM69 484 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 GCNT3O95395 438 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 SERPING1P05155 500 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 SERPINB4P48594 390 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 SKOR1P84550 965 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 CEP55Q53EZ4 464 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 SGO2Q562F6 1265 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 ZNF658Q5TYW1 1059 aaPredicted RBP12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 USP40Q9NVE5 1235 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 EYA2O00167 538 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 DNAJC6O75061 913 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 TRAPPC10P48553 1259 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 PSMC1P62191 440 aaKnown RBP12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 PDE1BQ01064 536 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 CAV1Q03135 178 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 EXOC3L4Q17RC7 722 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 RARS2Q5T160 578 aaKnown RBP12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 TMCO5AQ8N6Q1 288 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 DDX28Q9NUL7 540 aaKnown RBP12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 WARS2Q9UGM6 360 aaKnown RBP12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 ZBBXA8MT70 800 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 NVLO15381 856 aaKnown RBP12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 CAPN12Q6ZSI9 719 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 WAPLQ7Z5K2 1190 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 TEKT4Q8WW24 435 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 SLC40A1Q9NP59 571 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 UTP6Q9NYH9 597 aaKnown RBP12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 LRRIQ3A6PVS8 624 aaPredicted RBP12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 LRIG3Q6UXM1 1119 aa12.73□□□□□ -0.37
CSPG4P12-201ENST00000558282 ACADSP16219 412 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 SERPINB3P29508 390 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 CXCR5P32302 372 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 KIF11P52732 1056 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 ARID5BQ14865 1188 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 CENPUQ71F23 418 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 GPIHBP1Q8IV16 184 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 P2RX5Q93086 422 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 FOXP1Q9H334 677 aaPredicted RBP12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 CAPN11Q9UMQ6 739 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 KPNA2P52292 529 aaKnown RBP12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 TOGARAM2Q6ZUX3 1019 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 PRPF31Q8WWY3 499 aaKnown RBP12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 MAP4K1Q92918 833 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 SCYL1Q96KG9 808 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 PTPN22Q9Y2R2 807 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 PCDHB13Q9Y5F0 798 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 GSTA1P08263 222 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 EIF4A3P38919 411 aaKnown RBP12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 PTH1RQ03431 593 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 DAB2IPQ5VWQ8 1189 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 TRMT2AQ8IZ69 625 aaKnown RBP12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 MYCT1Q8N699 235 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 JARID2Q92833 1246 aaPredicted RBP12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 PPARGC1AQ9UBK2 798 aaKnown RBP12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 STK17AQ9UEE5 414 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 PNMA6EA0A0J9YXQ4 647 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 LAD1O00515 517 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 TMCC1O94876 653 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 FTCDO95954 541 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 ADCY7P51828 1080 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 AKNAD1Q5T1N1 836 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 NAIF1Q69YI7 327 aaPredicted RBP12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 CYP4F22Q6NT55 531 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 PROSER2Q86WR7 435 aaPredicted RBP12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 SSH3Q8TE77 659 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 ZBTB10Q96DT7 871 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 CLIC6Q96NY7 704 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 DBNDD2Q9BQY9 259 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 TAF1DQ9H5J8 278 aaPredicted RBP12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 ST7Q9NRC1 585 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 ARHGAP26Q9UNA1 814 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 ANGPTL3Q9Y5C1 460 aa12.72□□□□□ -0.37
CSPG4P12-201ENST00000558282 RIMS2Q9UQ26 1411 aa12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 SCG2P13521 617 aa12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 HSPA9P38646 679 aaKnown RBP12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 IRAK1P51617 712 aa12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 BZW1Q7L1Q6 419 aaKnown RBP12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 TTLL11Q8NHH1 800 aa12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 MAML1Q92585 1016 aa12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 SYMPKQ92797 1274 aaKnown RBP12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 CARD10Q9BWT7 1032 aa12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 KIF9Q9HAQ2 790 aa12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 KIAA0232Q92628 1395 aa12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 MYO1FO00160 1098 aa12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 PDIA3P30101 505 aaKnown RBP12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 NSFP46459 744 aaKnown RBP12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 BPIFB4P59827 614 aa12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 KPNB1Q14974 876 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms