RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 HDGFL2Q7Z4V5 671 aaPredicted RBP12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 OSTM1Q86WC4 334 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 MAP7D3Q8IWC1 876 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 TUBGCP5Q96RT8 1024 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 DRC3Q9H069 523 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 ARHGEF3Q9NR81 526 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 USP20Q9Y2K6 914 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 ZNF711Q9Y462 761 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 MYH1P12882 1939 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 CETN3O15182 167 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 TMOD1P28289 359 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 PAK2Q13177 524 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 KLC3Q6P597 504 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 CAPN12Q6ZSI9 719 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 THEMISQ8N1K5 641 aaPredicted RBP12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 GBP5Q96PP8 586 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 PLAAQ9Y263 795 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 TBC1D30Q9Y2I9 924 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 FADS3Q9Y5Q0 445 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 SPDYCQ5MJ68 293 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 RASIP1Q5U651 963 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 POGZQ7Z3K3 1410 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 TREML1Q86YW5 311 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 PDCD7Q8N8D1 485 aaKnown RBP12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 RAPGEF6Q8TEU7 1601 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 RUBCNQ92622 972 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 GATA6Q92908 595 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 TBCCD1Q9NVR7 557 aa12.06□□□□□ -0.48
SEMA4B-204ENST00000558065 JCADQ9P266 1359 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 MSL3P1P0C860 447 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 UBL4AP11441 157 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 PLCG2P16885 1265 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 HPDP32754 393 aaPredicted RBP12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 ZC3H6P61129 1189 aaKnown RBP12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 MYL5Q02045 173 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 CNGA3Q16281 694 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 TMEM214Q6NUQ4 689 aaKnown RBP12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 DNAJC9Q8WXX5 260 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 CLK4Q9HAZ1 481 aaKnown RBP12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 CHPF2Q9P2E5 772 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 GLI2P10070 1586 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 ENC1O14682 589 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 HIP1RO75146 1068 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 DGKIO75912 1065 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 ASMTLO95671 621 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 TPBGLP0DKB5 382 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 CALB2P22676 271 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 TMPOP42166 694 aaKnown RBP12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 RAD23BP54727 409 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 DHX9Q08211 1270 aaKnown RBP12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 C2orf54Q08AI8 447 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 SLC4A10Q6U841 1118 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 CCDC197Q8NCU1 140 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 SDF4Q9BRK5 362 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 BHMT2Q9H2M3 363 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 RNPEPL1Q9HAU8 725 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 TDRKHQ9Y2W6 561 aaKnown RBP12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 TRAPPC8Q9Y2L5 1435 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 SBNO1A3KN83 1393 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 TRIM64CA6NLI5 447 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 ATP1A1P05023 1023 aaKnown RBP12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 KCNA3P22001 575 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 ATP11AP98196 1134 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 PPARDQ03181 441 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 PAPD7Q5XG87 772 aaKnown RBP12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 ASAP3Q8TDY4 903 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 CCDC85AQ96PX6 553 aaPredicted RBP12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 MAST1Q9Y2H9 1570 aa12.05□□□□□ -0.48
SEMA4B-204ENST00000558065 ORC4O43929 436 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 TJP3O95049 919 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 IFT81Q8WYA0 676 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 CCDC43Q96MW1 224 aaKnown RBP12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 PHAXQ9H814 394 aaKnown RBP12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 ZSWIM6Q9HCJ5 1215 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 FAIMQ9NVQ4 179 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 PDP2Q9P2J9 529 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 KIAA0556O60303 1618 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 TTC34A8MYJ7 566 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 PSMD14O00487 310 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 ATP8B2P98198 1209 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 ITIH4Q14624 930 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 CFAP58Q5T655 872 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 DIS3LQ8TF46 1054 aaKnown RBP12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 CAPZA3Q96KX2 299 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 SPATA17Q96L03 361 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 NAA15Q9BXJ9 866 aaKnown RBP12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 API5Q9BZZ5 524 aaKnown RBP12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 PCDH11XQ9BZA7 1347 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 GOLGA6L10A0A0M3HER8 536 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 PEX11AO75192 247 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 PEX14O75381 377 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 S100A1P23297 94 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 COPB2P35606 906 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 EAPPQ56P03 285 aaPredicted RBP12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 SLC27A3Q5K4L6 730 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 ASRGL1Q7L266 308 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 TRPM8Q7Z2W7 1104 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 TMC4Q7Z404 712 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 219.3 ms