RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 MCMDC2Q4G0Z9 681 aa14.42□□□□□ -0.1
SNX6-209ENST00000557265 C7orf31Q8N865 590 aa14.42□□□□□ -0.1
SNX6-209ENST00000557265 SYTL5Q8TDW5 730 aaPredicted RBP14.42□□□□□ -0.1
SNX6-209ENST00000557265 NSUN6Q8TEA1 469 aaKnown RBP14.42□□□□□ -0.1
SNX6-209ENST00000557265 CD320Q9NPF0 282 aa14.42□□□□□ -0.1
SNX6-209ENST00000557265 GTF2IRD1Q9UHL9 959 aa14.42□□□□□ -0.1
SNX6-209ENST00000557265 SCN5AQ14524 2016 aa14.42□□□□□ -0.1
SNX6-209ENST00000557265 SALL3Q9BXA9 1300 aa14.41□□□□□ -0.1
SNX6-209ENST00000557265 A0A0D9SFI3 127 aa14.41□□□□□ -0.1
SNX6-209ENST00000557265 ABHD14A-ACY1A0A1B0GW23 586 aa14.41□□□□□ -0.1
SNX6-209ENST00000557265 PI4K2BG5E9Z4 385 aa14.41□□□□□ -0.1
SNX6-209ENST00000557265 ERVK-21P61565 698 aa14.41□□□□□ -0.1
SNX6-209ENST00000557265 STXBP2Q15833 593 aa14.41□□□□□ -0.1
SNX6-209ENST00000557265 DGKDQ16760 1214 aa14.41□□□□□ -0.1
SNX6-209ENST00000557265 GPATCH4Q5T3I0 446 aaKnown RBP14.41□□□□□ -0.1
SNX6-209ENST00000557265 FAM117BQ6P1L5 589 aa14.41□□□□□ -0.1
SNX6-209ENST00000557265 MFSD6Q6ZSS7 791 aa14.41□□□□□ -0.1
SNX6-209ENST00000557265 TGS1Q96RS0 853 aaKnown RBP14.41□□□□□ -0.1
SNX6-209ENST00000557265 ALG1Q9BT22 464 aa14.41□□□□□ -0.1
SNX6-209ENST00000557265 COL20A1Q9P218 1284 aa14.41□□□□□ -0.1
SNX6-209ENST00000557265 HDAC6Q9UBN7 1215 aa14.41□□□□□ -0.1
SNX6-209ENST00000557265 ZBTB47Q9UFB7 747 aaPredicted RBP14.41□□□□□ -0.1
SNX6-209ENST00000557265 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.4□□□□□ -0.1
SNX6-209ENST00000557265 LINC01553A4QN01 128 aa14.4□□□□□ -0.1
SNX6-209ENST00000557265 PSEN2P49810 448 aa14.4□□□□□ -0.1
SNX6-209ENST00000557265 IKBKEQ14164 716 aa14.4□□□□□ -0.1
SNX6-209ENST00000557265 CDC37Q16543 378 aaPredicted RBP14.4□□□□□ -0.1
SNX6-209ENST00000557265 ANKRD45Q5TZF3 282 aa14.4□□□□□ -0.1
SNX6-209ENST00000557265 ZNF589Q86UQ0 364 aaPredicted RBP14.4□□□□□ -0.1
SNX6-209ENST00000557265 IWS1Q96ST2 819 aa14.4□□□□□ -0.1
SNX6-209ENST00000557265 CRBNQ96SW2 442 aa14.4□□□□□ -0.1
SNX6-209ENST00000557265 RMDN3Q96TC7 470 aa14.4□□□□□ -0.1
SNX6-209ENST00000557265 ZKSCAN3Q9BRR0 538 aa14.4□□□□□ -0.1
SNX6-209ENST00000557265 MAF1Q9H063 256 aa14.4□□□□□ -0.1
SNX6-209ENST00000557265 UBE2ZQ9H832 354 aaPredicted RBP14.4□□□□□ -0.1
SNX6-209ENST00000557265 DDX41Q9UJV9 622 aaKnown RBP14.4□□□□□ -0.1
SNX6-209ENST00000557265 ABCB11O95342 1321 aa14.4□□□□□ -0.1
SNX6-209ENST00000557265 EFCAB14O75071 495 aa14.39□□□□□ -0.11
SNX6-209ENST00000557265 PCP11498 1178 aaKnown RBP14.39□□□□□ -0.11
SNX6-209ENST00000557265 EIF2AK2P19525 551 aaKnown RBP14.39□□□□□ -0.11
SNX6-209ENST00000557265 ZNF200P98182 395 aaPredicted RBP14.39□□□□□ -0.11
SNX6-209ENST00000557265 NMIQ13287 307 aaPredicted RBP14.39□□□□□ -0.11
SNX6-209ENST00000557265 PTK7Q13308 1070 aa14.39□□□□□ -0.11
SNX6-209ENST00000557265 MFSD10Q14728 455 aa14.39□□□□□ -0.11
SNX6-209ENST00000557265 ZNF618Q5T7W0 954 aa14.39□□□□□ -0.11
SNX6-209ENST00000557265 ARHGEF16Q5VV41 709 aa14.39□□□□□ -0.11
SNX6-209ENST00000557265 TRAF7Q6Q0C0 670 aa14.39□□□□□ -0.11
SNX6-209ENST00000557265 MCF2L2Q86YR7 1114 aa14.39□□□□□ -0.11
SNX6-209ENST00000557265 TBC1D10CQ8IV04 446 aa14.39□□□□□ -0.11
SNX6-209ENST00000557265 ADGRF4Q8IZF3 695 aa14.39□□□□□ -0.11
SNX6-209ENST00000557265 ESR2Q92731 530 aa14.39□□□□□ -0.11
SNX6-209ENST00000557265 WNT8BQ93098 351 aa14.39□□□□□ -0.11
SNX6-209ENST00000557265 TET1Q8NFU7 2136 aa14.39□□□□□ -0.11
SNX6-209ENST00000557265 ZMYM6O95789 1325 aa14.39□□□□□ -0.11
SNX6-209ENST00000557265 PIEZO1Q92508 2521 aa14.38□□□□□ -0.11
SNX6-209ENST00000557265 EIF3JO75822 258 aaKnown RBP14.38□□□□□ -0.11
SNX6-209ENST00000557265 ZNF286BP0CG31 522 aa14.38□□□□□ -0.11
SNX6-209ENST00000557265 KCNA5P22460 613 aa14.38□□□□□ -0.11
SNX6-209ENST00000557265 PDE1AP54750 535 aa14.38□□□□□ -0.11
SNX6-209ENST00000557265 LAMC2Q13753 1193 aa14.38□□□□□ -0.11
SNX6-209ENST00000557265 MBTPS1Q14703 1052 aa14.38□□□□□ -0.11
SNX6-209ENST00000557265 KIAA0753Q2KHM9 967 aa14.38□□□□□ -0.11
SNX6-209ENST00000557265 TRIM71Q2Q1W2 868 aaKnown RBP14.38□□□□□ -0.11
SNX6-209ENST00000557265 LEXMQ3ZCV2 418 aa14.38□□□□□ -0.11
SNX6-209ENST00000557265 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.38□□□□□ -0.11
SNX6-209ENST00000557265 DGKHQ86XP1 1220 aa14.38□□□□□ -0.11
SNX6-209ENST00000557265 GJD3Q8N144 294 aa14.38□□□□□ -0.11
SNX6-209ENST00000557265 PPTC7Q8NI37 304 aa14.38□□□□□ -0.11
SNX6-209ENST00000557265 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.38□□□□□ -0.11
SNX6-209ENST00000557265 EMID1Q96A84 441 aaPredicted RBP14.38□□□□□ -0.11
SNX6-209ENST00000557265 C17orf80Q9BSJ5 609 aa14.38□□□□□ -0.11
SNX6-209ENST00000557265 KATNAL1Q9BW62 490 aa14.38□□□□□ -0.11
SNX6-209ENST00000557265 RNF41Q9H4P4 317 aaPredicted RBP14.38□□□□□ -0.11
SNX6-209ENST00000557265 MRVI1Q9Y6F6 885 aa14.38□□□□□ -0.11
SNX6-209ENST00000557265 HAS3O00219 553 aa14.37□□□□□ -0.11
SNX6-209ENST00000557265 LGR5O75473 907 aa14.37□□□□□ -0.11
SNX6-209ENST00000557265 F2P00734 622 aa14.37□□□□□ -0.11
SNX6-209ENST00000557265 NR3C2P08235 984 aa14.37□□□□□ -0.11
SNX6-209ENST00000557265 QRICH1Q2TAL8 776 aa14.37□□□□□ -0.11
SNX6-209ENST00000557265 FAM178BQ8IXR5 827 aa14.37□□□□□ -0.11
SNX6-209ENST00000557265 DHX37Q8IY37 1157 aaKnown RBP14.37□□□□□ -0.11
SNX6-209ENST00000557265 PNMA1Q8ND90 353 aa14.37□□□□□ -0.11
SNX6-209ENST00000557265 FBXO22Q8NEZ5 403 aa14.37□□□□□ -0.11
SNX6-209ENST00000557265 VAT1LQ9HCJ6 419 aa14.37□□□□□ -0.11
SNX6-209ENST00000557265 MRPL11Q9Y3B7 192 aaKnown RBP14.37□□□□□ -0.11
SNX6-209ENST00000557265 INSL6Q9Y581 213 aa14.37□□□□□ -0.11
SNX6-209ENST00000557265 BRWD1Q9NSI6 2320 aa14.37□□□□□ -0.11
SNX6-209ENST00000557265 NEDD4P46934 1319 aa14.37□□□□□ -0.11
SNX6-209ENST00000557265 CCDC171Q6TFL3 1326 aa14.37□□□□□ -0.11
SNX6-209ENST00000557265 DHX16O60231 1041 aaKnown RBP14.36□□□□□ -0.11
SNX6-209ENST00000557265 SORBS3O60504 671 aa14.36□□□□□ -0.11
SNX6-209ENST00000557265 CFBP00751 764 aa14.36□□□□□ -0.11
SNX6-209ENST00000557265 SSTR3P32745 418 aaPredicted RBP14.36□□□□□ -0.11
SNX6-209ENST00000557265 HIC1Q14526 733 aa14.36□□□□□ -0.11
SNX6-209ENST00000557265 PTCRAQ6ISU1 281 aaPredicted RBP14.36□□□□□ -0.11
SNX6-209ENST00000557265 FBXO11Q86XK2 927 aa14.36□□□□□ -0.11
SNX6-209ENST00000557265 TICAM2Q86XR7 235 aa14.36□□□□□ -0.11
SNX6-209ENST00000557265 MYOCDQ8IZQ8 938 aa14.36□□□□□ -0.11
SNX6-209ENST00000557265 KAT14Q9H8E8 782 aa14.36□□□□□ -0.11
SNX6-209ENST00000557265 PXMP2Q9NR77 195 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms