RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 DIRC2Q96SL1 478 aa5.44□□□□□ -1.54
ATXN3-241ENST00000556374 BCL2L13Q9BXK5 485 aa5.44□□□□□ -1.54
ATXN3-241ENST00000556374 ASCC2Q9H1I8 757 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-241ENST00000556374 SLC12A5Q9H2X9 1139 aa5.44□□□□□ -1.54
ATXN3-241ENST00000556374 YBX2Q9Y2T7 364 aaKnown RBP5.44□□□□□ -1.54
ATXN3-241ENST00000556374 CORINQ9Y5Q5 1042 aa5.44□□□□□ -1.54
ATXN3-241ENST00000556374 COL3A1P02461 1466 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-241ENST00000556374 SBNO1A3KN83 1393 aa5.43□□□□□ -1.54
ATXN3-241ENST00000556374 TECPR2O15040 1411 aa5.43□□□□□ -1.54
ATXN3-241ENST00000556374 YTHDC2Q9H6S0 1430 aaKnown RBP5.43□□□□□ -1.54
ATXN3-241ENST00000556374 UPK3BL1B0FP48 263 aa5.43□□□□□ -1.54
ATXN3-241ENST00000556374 UPK3BL2E5RIL1 263 aa5.43□□□□□ -1.54
ATXN3-241ENST00000556374 IGHDP01880 384 aa5.43□□□□□ -1.54
ATXN3-241ENST00000556374 ZSCAN22P10073 491 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-241ENST00000556374 PDIA4P13667 645 aaKnown RBP5.43□□□□□ -1.54
ATXN3-241ENST00000556374 GBP2P32456 591 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-241ENST00000556374 TNNI2P48788 182 aa5.43□□□□□ -1.54
ATXN3-241ENST00000556374 CWF19L2Q2TBE0 894 aaKnown RBP5.43□□□□□ -1.54
ATXN3-241ENST00000556374 DAGLBQ8NCG7 672 aa5.43□□□□□ -1.54
ATXN3-241ENST00000556374 LINC01599Q8WXQ3 324 aa5.43□□□□□ -1.54
ATXN3-241ENST00000556374 ZNF428Q96B54 188 aa5.43□□□□□ -1.54
ATXN3-241ENST00000556374 PDGFDQ9GZP0 370 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-241ENST00000556374 SLKQ9H2G2 1235 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-241ENST00000556374 ZNF552Q9H707 407 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-241ENST00000556374 RNF19AQ9NV58 838 aa5.43□□□□□ -1.54
ATXN3-241ENST00000556374 BTG4Q9NY30 223 aa5.43□□□□□ -1.54
ATXN3-241ENST00000556374 ADCY9O60503 1353 aa5.42□□□□□ -1.54
ATXN3-241ENST00000556374 TUBGCP6Q96RT7 1819 aa5.42□□□□□ -1.54
ATXN3-241ENST00000556374 TEX51A0A1B0GUA7 166 aa5.42□□□□□ -1.54
ATXN3-241ENST00000556374 DIAPH1O60610 1272 aaKnown RBP5.42□□□□□ -1.54
ATXN3-241ENST00000556374 FRAT2O75474 233 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-241ENST00000556374 GARTP22102 1010 aa5.42□□□□□ -1.54
ATXN3-241ENST00000556374 GBP1P32455 592 aa5.42□□□□□ -1.54
ATXN3-241ENST00000556374 KIR2DL1P43626 348 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-241ENST00000556374 KIR2DL2P43627 348 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-241ENST00000556374 MFAP1P55081 439 aaKnown RBP5.42□□□□□ -1.54
ATXN3-241ENST00000556374 CHMP4BP1P59074 171 aa5.42□□□□□ -1.54
ATXN3-241ENST00000556374 TEKQ02763 1124 aa5.42□□□□□ -1.54
ATXN3-241ENST00000556374 HDAC1Q13547 482 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-241ENST00000556374 CDCP2Q5VXM1 449 aa5.42□□□□□ -1.54
ATXN3-241ENST00000556374 CIAPIN1Q6FI81 312 aa5.42□□□□□ -1.54
ATXN3-241ENST00000556374 TMEM132EQ6IEE7 984 aa5.42□□□□□ -1.54
ATXN3-241ENST00000556374 ATF7IPQ6VMQ6 1270 aa5.42□□□□□ -1.54
ATXN3-241ENST00000556374 ATG14Q6ZNE5 492 aa5.42□□□□□ -1.54
ATXN3-241ENST00000556374 LCNL1Q6ZST4 164 aa5.42□□□□□ -1.54
ATXN3-241ENST00000556374 ERMP1Q7Z2K6 904 aa5.42□□□□□ -1.54
ATXN3-241ENST00000556374 ZNF655Q8N720 491 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-241ENST00000556374 INTS4Q96HW7 963 aaKnown RBP5.42□□□□□ -1.54
ATXN3-241ENST00000556374 CRTAC1Q9NQ79 661 aa5.42□□□□□ -1.54
ATXN3-241ENST00000556374 PRR13Q9NZ81 148 aa5.42□□□□□ -1.54
ATXN3-241ENST00000556374 POLR3KQ9Y2Y1 108 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-241ENST00000556374 PCDHA11Q9Y5I1 949 aa5.42□□□□□ -1.54
ATXN3-241ENST00000556374 OVOS2A0A0G2JMS6 1433 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 OVOS2A0A0J9YW53 1432 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 OVOS2Q6IE36 1432 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 LMO7Q8WWI1 1683 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 MON2Q7Z3U7 1717 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 CHURC1-FNTBB4DL54 471 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 ETV2O00321 342 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-241ENST00000556374 GREM1O60565 184 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 HSP90AA1P07900 732 aaKnown RBP5.41□□□□□ -1.54
ATXN3-241ENST00000556374 HSP90AB1P08238 724 aaKnown RBP5.41□□□□□ -1.54
ATXN3-241ENST00000556374 TMPOP42166 694 aaKnown RBP5.41□□□□□ -1.54
ATXN3-241ENST00000556374 ERVFC1P60507 584 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 EXOSC9Q06265 439 aaKnown RBP5.41□□□□□ -1.54
ATXN3-241ENST00000556374 SAFB2Q14151 953 aaKnown RBP eCLIP5.41□□□□□ -1.54
ATXN3-241ENST00000556374 GPR162Q16538 588 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 CLEC16AQ2KHT3 1053 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 ALDH1L2Q3SY69 923 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 SNAP47Q5SQN1 464 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 TTLL10Q6ZVT0 673 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 PHACTR4Q8IZ21 702 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 REXO1Q8N1G1 1221 aaKnown RBP5.41□□□□□ -1.54
ATXN3-241ENST00000556374 FAM43AQ8N2R8 423 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 GOLM1Q8NBJ4 401 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 LINC00116Q8NCU8 138 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 KRTAP17-1Q9BYP8 105 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 C22orf23Q9BZE7 217 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 MTFR1LQ9H019 292 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 RNF32Q9H0A6 362 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 EHMT1Q9H9B1 1298 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 CHMP5Q9NZZ3 219 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 GMIPQ9P107 970 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 STK26Q9P289 416 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 SMG5Q9UPR3 1016 aaKnown RBP5.41□□□□□ -1.54
ATXN3-241ENST00000556374 SPATA31A1Q5TZJ5 1347 aa5.41□□□□□ -1.54
ATXN3-241ENST00000556374 GOLGA6L3A6NEY3 463 aa5.4□□□□□ -1.54
ATXN3-241ENST00000556374 WASH4PA8MWX3 477 aa5.4□□□□□ -1.54
ATXN3-241ENST00000556374 NPIPB6E9PJ23 425 aa5.4□□□□□ -1.54
ATXN3-241ENST00000556374 GOLGA6L22H0YM25 854 aa5.4□□□□□ -1.54
ATXN3-241ENST00000556374 RIPK4P57078 832 aa5.4□□□□□ -1.54
ATXN3-241ENST00000556374 LRRFIP1Q32MZ4 808 aaKnown RBP5.4□□□□□ -1.54
ATXN3-241ENST00000556374 LILRA6Q6PI73 481 aa5.4□□□□□ -1.54
ATXN3-241ENST00000556374 CASC1Q6TDU7 716 aa5.4□□□□□ -1.54
ATXN3-241ENST00000556374 KRT28Q7Z3Y7 464 aa5.4□□□□□ -1.54
ATXN3-241ENST00000556374 BAHD1Q8TBE0 780 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-241ENST00000556374 TSR2Q969E8 191 aaKnown RBP5.4□□□□□ -1.54
ATXN3-241ENST00000556374 GBP4Q96PP9 640 aa5.4□□□□□ -1.54
ATXN3-241ENST00000556374 PRAM1Q96QH2 718 aa5.4□□□□□ -1.54
ATXN3-241ENST00000556374 HDAC8Q9BY41 377 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms