RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 ZNF853P0CG23 659 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 PIK3CAP42336 1068 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 GPR162Q16538 588 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 PODNQ7Z5L7 613 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 DHX38Q92620 1227 aaKnown RBP11.66□□□□□ -0.54
ACTN1-216ENST00000556083 DRC3Q9H069 523 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 PPP2R2CQ9Y2T4 447 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 PBRM1Q86U86 1689 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 LRRIQ4A6NIV6 560 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 XPAP23025 273 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-216ENST00000556083 FAM47CQ5HY64 1035 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 TMEM179Q6ZVK1 233 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 RHOT2Q8IXI1 618 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 PLCD3Q8N3E9 789 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 PPM1KQ8N3J5 372 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 MCPH1Q8NEM0 835 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 MMS19Q96T76 1030 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 ZNF577Q9BSK1 485 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 SNX25Q9H3E2 840 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 PRDM10Q9NQV6 1147 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 RWDD2AQ9UIY3 292 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 RIPOR2Q9Y4F9 1068 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 HEG1Q9ULI3 1381 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 SART1O43290 800 aaKnown RBP11.65□□□□□ -0.54
ACTN1-216ENST00000556083 CPA1P15085 419 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 STAT2P52630 851 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 STX1BP61266 288 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 GADL1Q6ZQY3 521 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 NCAPG2Q86XI2 1143 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 KCTD17Q8N5Z5 321 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 TTC16Q8NEE8 873 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 KLHDC4Q8TBB5 520 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 TUBGCP2Q9BSJ2 902 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 CPSF2Q9P2I0 782 aaKnown RBP11.65□□□□□ -0.54
ACTN1-216ENST00000556083 CDC23Q9UJX2 597 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 RCOR1Q9UKL0 485 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 STK36Q9NRP7 1315 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 GPC4O75487 556 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 SUN1O94901 812 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 CCNE1P24864 410 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 ARL13BQ3SXY8 428 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 CCDC13Q8IYE1 715 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 FAM186BQ8IYM0 893 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 KIRREL3Q8IZU9 778 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 PROM2Q8N271 834 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 PAGR1Q9BTK6 254 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 BSDC1Q9NW68 430 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-216ENST00000556083 CPSF3Q9UKF6 684 aaKnown RBP11.65□□□□□ -0.54
ACTN1-216ENST00000556083 KAT6BQ8WYB5 2073 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 JAK2O60674 1132 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 SERPINB2P05120 415 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 EPHB4P54760 987 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 GRAPQ13588 217 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 RBBP5Q15291 538 aaKnown RBP11.65□□□□□ -0.54
ACTN1-216ENST00000556083 GRAPLQ8TC17 118 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-216ENST00000556083 EPS15L1Q9UBC2 864 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 PCDHA7Q9UN72 937 aa11.65□□□□□ -0.54
ACTN1-216ENST00000556083 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-216ENST00000556083 A0A0D9SFI3 127 aa11.65□□□□□ -0.55
ACTN1-216ENST00000556083 IFNB1P01574 187 aa11.65□□□□□ -0.55
ACTN1-216ENST00000556083 INHBAP08476 426 aa11.65□□□□□ -0.55
ACTN1-216ENST00000556083 ZBED6P86452 979 aa11.65□□□□□ -0.55
ACTN1-216ENST00000556083 CUL4AQ13619 759 aa11.65□□□□□ -0.55
ACTN1-216ENST00000556083 PRPF38AQ8NAV1 312 aaKnown RBP11.65□□□□□ -0.55
ACTN1-216ENST00000556083 TTC13Q8NBP0 860 aa11.65□□□□□ -0.55
ACTN1-216ENST00000556083 EDEM3Q9BZQ6 932 aa11.65□□□□□ -0.55
ACTN1-216ENST00000556083 KMT5AQ9NQR1 393 aa11.65□□□□□ -0.55
ACTN1-216ENST00000556083 ZNF148Q9UQR1 794 aa11.65□□□□□ -0.55
ACTN1-216ENST00000556083 CCDC188H7C350 402 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 KIAA0391O15091 583 aaKnown RBP11.64□□□□□ -0.55
ACTN1-216ENST00000556083 SCP2P22307 547 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 PNOCQ13519 176 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 ARHGEF18Q6ZSZ5 1173 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 OTUD7AQ8TE49 926 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-216ENST00000556083 MYL10Q9BUA6 226 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 SEL1LQ9UBV2 794 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 PNMA6FA0A0J9YX94 578 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 MIF4GDA9UHW6 222 aaKnown RBP11.64□□□□□ -0.55
ACTN1-216ENST00000556083 MCF2LO15068 1137 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 FOXP2O15409 715 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 GYG1P46976 350 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 CDC42EP1Q00587 391 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 GPATCH11Q8N954 259 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 LSG1Q9H089 658 aaKnown RBP11.64□□□□□ -0.55
ACTN1-216ENST00000556083 PRKAG2Q9UGJ0 569 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 LRFN2Q9ULH4 789 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 NR2F2P24468 414 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 AP3M2P53677 418 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 POLR2FP61218 127 aaKnown RBP11.64□□□□□ -0.55
ACTN1-216ENST00000556083 GLE1Q53GS7 698 aaKnown RBP11.64□□□□□ -0.55
ACTN1-216ENST00000556083 SYDE2Q5VT97 1194 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 TRMT2AQ8IZ69 625 aaKnown RBP11.64□□□□□ -0.55
ACTN1-216ENST00000556083 ZNF579Q8NAF0 562 aaKnown RBP11.64□□□□□ -0.55
ACTN1-216ENST00000556083 LRRC8CQ8TDW0 803 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 MORC4Q8TE76 937 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 CNOT6LQ96LI5 555 aaKnown RBP11.64□□□□□ -0.55
ACTN1-216ENST00000556083 KIF2CQ99661 725 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 PARVGQ9HBI0 331 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 UGGT1Q9NYU2 1555 aa11.64□□□□□ -0.55
ACTN1-216ENST00000556083 WDR64B1ANS9 1081 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms