RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 ZNF697Q5TEC3 545 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 CCSAPQ6IQ19 270 aaPredicted RBP7.85□□□□□ -1.15
PSEN1-216ENST00000556066 CXCL17Q6UXB2 119 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 BTNL9Q6UXG8 535 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 KIAA1211Q6ZU35 1233 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 ANKRD33Q7Z3H0 272 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 TLK2Q86UE8 772 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 FBXO16Q8IX29 292 aaPredicted RBP7.85□□□□□ -1.15
PSEN1-216ENST00000556066 RNPC3Q96LT9 517 aaKnown RBP7.85□□□□□ -1.15
PSEN1-216ENST00000556066 TTC14Q96N46 770 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 KATNBL1Q9H079 304 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 UPF3AQ9H1J1 476 aaKnown RBP7.85□□□□□ -1.15
PSEN1-216ENST00000556066 OSBPL3Q9H4L5 887 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 PRDM6Q9NQX0 595 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 PDGFCQ9NRA1 345 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 ADD3Q9UEY8 706 aaKnown RBP7.85□□□□□ -1.15
PSEN1-216ENST00000556066 V9GY48 417 aaPredicted RBP7.85□□□□□ -1.15
PSEN1-216ENST00000556066 A0A0U1RQG5 324 aaPredicted RBP7.84□□□□□ -1.15
PSEN1-216ENST00000556066 RCCD1A6NED2 376 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 B4E1Z4 1266 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 ARVCFO00192 962 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 HIP1O00291 1037 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 CTAGE5O15320 804 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 GOLGA8HP0CJ92 632 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 SMPD1P17405 629 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 EPHB4P54760 987 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 ZNF543Q08ER8 600 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 FSCN1Q16658 493 aaKnown RBP7.84□□□□□ -1.15
PSEN1-216ENST00000556066 IMMTQ16891 758 aaKnown RBP7.84□□□□□ -1.15
PSEN1-216ENST00000556066 USH1GQ495M9 461 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 TMEM63BQ5T3F8 832 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 IQSEC1Q6DN90 963 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 SLC30A10Q6XR72 485 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 RNF207Q6ZRF8 634 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 IQCA1Q86XH1 822 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 NLRP7Q8WX94 980 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 TOX2Q96NM4 488 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 CDX2Q99626 313 aaPredicted RBP7.84□□□□□ -1.15
PSEN1-216ENST00000556066 PPP1R12CQ9BZL4 782 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 FAM117AQ9C073 453 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 CPVLQ9H3G5 476 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 KAT14Q9H8E8 782 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 CDH23Q9H251 3354 aa7.84□□□□□ -1.15
PSEN1-216ENST00000556066 BAZ2BQ9UIF8 2168 aaKnown RBP7.84□□□□□ -1.15
PSEN1-216ENST00000556066 MYH7BA7E2Y1 1941 aa7.84□□□□□ -1.16
PSEN1-216ENST00000556066 TLR3O15455 904 aaKnown RBP7.83□□□□□ -1.16
PSEN1-216ENST00000556066 DHX16O60231 1041 aaKnown RBP7.83□□□□□ -1.16
PSEN1-216ENST00000556066 ZEB2O60315 1214 aa7.83□□□□□ -1.16
PSEN1-216ENST00000556066 TIMP1P01033 207 aa7.83□□□□□ -1.16
PSEN1-216ENST00000556066 CDK7P50613 346 aa7.83□□□□□ -1.16
PSEN1-216ENST00000556066 ALDH5A1P51649 535 aaPredicted RBP7.83□□□□□ -1.16
PSEN1-216ENST00000556066 RPS6P62753 249 aaKnown RBP7.83□□□□□ -1.16
PSEN1-216ENST00000556066 GPATCH4Q5T3I0 446 aaKnown RBP7.83□□□□□ -1.16
PSEN1-216ENST00000556066 TAPT1Q6NXT6 567 aa7.83□□□□□ -1.16
PSEN1-216ENST00000556066 PNMA1Q8ND90 353 aa7.83□□□□□ -1.16
PSEN1-216ENST00000556066 IL27Q8NEV9 243 aa7.83□□□□□ -1.16
PSEN1-216ENST00000556066 CLEC4DQ8WXI8 215 aa7.83□□□□□ -1.16
PSEN1-216ENST00000556066 ZSCAN10Q96SZ4 725 aaPredicted RBP7.83□□□□□ -1.16
PSEN1-216ENST00000556066 DSCC1Q9BVC3 393 aa7.83□□□□□ -1.16
PSEN1-216ENST00000556066 WDR11Q9BZH6 1224 aa7.83□□□□□ -1.16
PSEN1-216ENST00000556066 UBA5Q9GZZ9 404 aa7.83□□□□□ -1.16
PSEN1-216ENST00000556066 SEMA6BQ9H3T3 888 aa7.83□□□□□ -1.16
PSEN1-216ENST00000556066 VTA1Q9NP79 307 aa7.83□□□□□ -1.16
PSEN1-216ENST00000556066 CTNNA3Q9UI47 895 aa7.83□□□□□ -1.16
PSEN1-216ENST00000556066 TBX21Q9UL17 535 aa7.83□□□□□ -1.16
PSEN1-216ENST00000556066 GNEQ9Y223 722 aaKnown RBP7.83□□□□□ -1.16
PSEN1-216ENST00000556066 KIAA1217Q5T5P2 1943 aa7.83□□□□□ -1.16
PSEN1-216ENST00000556066 GBF1Q92538 1859 aa7.83□□□□□ -1.16
PSEN1-216ENST00000556066 SMAPO00193 183 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 CABYRO75952 493 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 SNHG28P0DPA3 235 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 CSF2RAP15509 400 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 DNAJB2P25686 324 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 CYP2C18P33260 490 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 GGCXP38435 758 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 PSMC6P62333 389 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 SMAD3P84022 425 aaKnown RBP7.82□□□□□ -1.16
PSEN1-216ENST00000556066 PPIGQ13427 754 aaKnown RBP eCLIP7.82□□□□□ -1.16
PSEN1-216ENST00000556066 ITGA7Q13683 1181 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 DUSP28Q4G0W2 176 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 CCDC178Q5BJE1 867 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 MFSD5Q6N075 450 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 DGKHQ86XP1 1220 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 FAM126BQ8IXS8 530 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 TMEM199Q8N511 208 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 ENAHQ8N8S7 591 aaPredicted RBP7.82□□□□□ -1.16
PSEN1-216ENST00000556066 MPHOSPH6Q99547 160 aaKnown RBP7.82□□□□□ -1.16
PSEN1-216ENST00000556066 UBAC1Q9BSL1 405 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 KRT23Q9C075 422 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 TTYH1Q9H313 450 aaPredicted RBP7.82□□□□□ -1.16
PSEN1-216ENST00000556066 VAT1LQ9HCJ6 419 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 ZSWIM5Q9P217 1185 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 PNMA2Q9UL42 364 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 CHD9Q3L8U1 2897 aa7.82□□□□□ -1.16
PSEN1-216ENST00000556066 TRIP12Q14669 1992 aaPredicted RBP7.82□□□□□ -1.16
PSEN1-216ENST00000556066 TNKSO95271 1327 aa7.81□□□□□ -1.16
PSEN1-216ENST00000556066 WDR19Q8NEZ3 1342 aa7.81□□□□□ -1.16
PSEN1-216ENST00000556066 MYL3P08590 195 aa7.81□□□□□ -1.16
PSEN1-216ENST00000556066 PARP1P09874 1014 aaKnown RBP7.81□□□□□ -1.16
PSEN1-216ENST00000556066 ACRP10323 421 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms