RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.7■■□□□ 1.39
ARHGEF40-204ENST00000555038 V9GYY5 206 aaPredicted RBP23.7■■□□□ 1.39
ARHGEF40-204ENST00000555038 PPIP5K2O43314 1243 aa23.7■■□□□ 1.38
ARHGEF40-204ENST00000555038 TBC1D8BQ0IIM8 1120 aa23.7■■□□□ 1.38
ARHGEF40-204ENST00000555038 ERCC6LQ2NKX8 1250 aa23.7■■□□□ 1.38
ARHGEF40-204ENST00000555038 FBXO11Q86XK2 927 aa23.7■■□□□ 1.38
ARHGEF40-204ENST00000555038 DDX12PQ92771 950 aa23.7■■□□□ 1.38
ARHGEF40-204ENST00000555038 NOC4LQ9BVI4 516 aaKnown RBP23.7■■□□□ 1.38
ARHGEF40-204ENST00000555038 TTYH3Q9C0H2 523 aa23.7■■□□□ 1.38
ARHGEF40-204ENST00000555038 SLC39A2Q9NP94 309 aa23.7■■□□□ 1.38
ARHGEF40-204ENST00000555038 B4DLN1 442 aa23.69■■□□□ 1.38
ARHGEF40-204ENST00000555038 RNF225M0QZC1 329 aaPredicted RBP23.69■■□□□ 1.38
ARHGEF40-204ENST00000555038 PES1O00541 588 aaKnown RBP23.69■■□□□ 1.38
ARHGEF40-204ENST00000555038 MEIS2O14770 477 aa23.69■■□□□ 1.38
ARHGEF40-204ENST00000555038 SLURP2P0DP57 97 aa23.69■■□□□ 1.38
ARHGEF40-204ENST00000555038 BMP3P12645 472 aa23.69■■□□□ 1.38
ARHGEF40-204ENST00000555038 H2AFXP16104 143 aaPredicted RBP23.69■■□□□ 1.38
ARHGEF40-204ENST00000555038 MEA1Q16626 185 aa23.69■■□□□ 1.38
ARHGEF40-204ENST00000555038 TSG101Q99816 390 aa23.69■■□□□ 1.38
ARHGEF40-204ENST00000555038 NUDT12Q9BQG2 462 aa23.69■■□□□ 1.38
ARHGEF40-204ENST00000555038 LZTFL1Q9NQ48 299 aa23.69■■□□□ 1.38
ARHGEF40-204ENST00000555038 OGFRQ9NZT2 677 aa23.69■■□□□ 1.38
ARHGEF40-204ENST00000555038 USP17L15C9J2P7 530 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 USP17L13C9JLJ4 530 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 USP17L11C9JVI0 530 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 USP17L18D6R9N7 530 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 USP17L22D6RA61 530 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 USP17L17D6RBQ6 530 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 USP17L19D6RCP7 530 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 USP17L20D6RJB6 530 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 RAD21O60216 631 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 USP17L24Q0WX57 530 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 Q4G0T1 1027 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 HAUS3Q68CZ6 603 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 USP17L6PQ6QN14 398 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 ZNF662Q6ZS27 426 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 CARD6Q9BX69 1037 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 ZNF219Q9P2Y4 722 aaPredicted RBP23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 EPN1Q9Y6I3 576 aaPredicted RBP23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 GDF11O95390 407 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 TUBB4BP68371 445 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 ZBED6P86452 979 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 MIIPQ5JXC2 388 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 FBXO38Q6PIJ6 1188 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 DYMQ7RTS9 669 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 KCNK18Q7Z418 384 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 RTKN2Q8IZC4 609 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 PRMT6Q96LA8 375 aaPredicted RBP23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 CSRNP1Q96S65 589 aa23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 ZNHIT6Q9NWK9 470 aaKnown RBP23.68■■□□□ 1.38
ARHGEF40-204ENST00000555038 YDJCA8MPS7 323 aa23.67■■□□□ 1.38
ARHGEF40-204ENST00000555038 NDUFA10O95299 355 aa23.67■■□□□ 1.38
ARHGEF40-204ENST00000555038 ARHGAP4P98171 946 aa23.67■■□□□ 1.38
ARHGEF40-204ENST00000555038 CDK17Q00537 523 aa23.67■■□□□ 1.38
ARHGEF40-204ENST00000555038 PPP2R3AQ06190 1150 aa23.67■■□□□ 1.38
ARHGEF40-204ENST00000555038 DNAJC19Q96DA6 116 aa23.67■■□□□ 1.38
ARHGEF40-204ENST00000555038 PSMD1Q99460 953 aa23.67■■□□□ 1.38
ARHGEF40-204ENST00000555038 ARGLU1Q9NWB6 273 aaPredicted RBP23.67■■□□□ 1.38
ARHGEF40-204ENST00000555038 DDX41Q9UJV9 622 aaKnown RBP23.67■■□□□ 1.38
ARHGEF40-204ENST00000555038 KIF20AO95235 890 aa23.66■■□□□ 1.38
ARHGEF40-204ENST00000555038 GH2P01242 217 aa23.66■■□□□ 1.38
ARHGEF40-204ENST00000555038 IDEP14735 1019 aa23.66■■□□□ 1.38
ARHGEF40-204ENST00000555038 TRIM21P19474 475 aaKnown RBP23.66■■□□□ 1.38
ARHGEF40-204ENST00000555038 SREBF1P36956 1147 aa23.66■■□□□ 1.38
ARHGEF40-204ENST00000555038 MAN2A1Q16706 1144 aa23.66■■□□□ 1.38
ARHGEF40-204ENST00000555038 SHROOM1Q2M3G4 852 aaPredicted RBP23.66■■□□□ 1.38
ARHGEF40-204ENST00000555038 RSBN1LQ6PCB5 846 aaPredicted RBP23.66■■□□□ 1.38
ARHGEF40-204ENST00000555038 CCDC170Q8IYT3 715 aa23.66■■□□□ 1.38
ARHGEF40-204ENST00000555038 KCTD17Q8N5Z5 321 aa23.66■■□□□ 1.38
ARHGEF40-204ENST00000555038 VPS33BQ9H267 617 aa23.66■■□□□ 1.38
ARHGEF40-204ENST00000555038 ARHGEF10LQ9HCE6 1279 aa23.66■■□□□ 1.38
ARHGEF40-204ENST00000555038 HDAC9Q9UKV0 1011 aa23.66■■□□□ 1.38
ARHGEF40-204ENST00000555038 SPDYE3A6NKU9 549 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 CIITAP33076 1130 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 KRT83P78385 493 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 CCDC84Q86UT8 332 aaPredicted RBP23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 CCDC65Q8IXS2 484 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 MYOCDQ8IZQ8 938 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 LRRN4CLQ8ND94 238 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 ACRBPQ8NEB7 543 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 ERMNQ8TAM6 284 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 FAM20AQ96MK3 541 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 SPDYE2BA6NHP3 402 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 PIK3CDO00329 1044 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 SPDYE6P0CI01 402 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 CYLC1P35663 651 aaPredicted RBP23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 COASYQ13057 564 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 ECM1Q16610 540 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 VWA3BQ502W6 1294 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 ETNPPLQ8TBG4 499 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 FAM151AQ8WW52 585 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 HAUS4Q9H6D7 363 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 PITPNM2Q9BZ72 1349 aa23.65■■□□□ 1.38
ARHGEF40-204ENST00000555038 CTAGE9A4FU28 777 aa23.64■■□□□ 1.37
ARHGEF40-204ENST00000555038 ARHGAP25P42331 645 aa23.64■■□□□ 1.37
ARHGEF40-204ENST00000555038 IKQ13123 557 aaPredicted RBP23.64■■□□□ 1.37
ARHGEF40-204ENST00000555038 ZNF569Q5MCW4 686 aa23.64■■□□□ 1.37
ARHGEF40-204ENST00000555038 FAM26FQ5R3K3 315 aa23.64■■□□□ 1.37
ARHGEF40-204ENST00000555038 FKBP1CQ5VVH2 108 aa23.64■■□□□ 1.37
ARHGEF40-204ENST00000555038 ARHGAP27Q6ZUM4 889 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms