RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	AOX1	Q06278	1338 aa		5.72	□□□□□ -1.49
ATXN3-231	ENST00000554994	COL1A1	P02452	1464 aa	Predicted RBP	5.71	□□□□□ -1.49
ATXN3-231	ENST00000554994	SART1	O43290	800 aa	Known RBP	5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	KRT37	O76014	449 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	DKK1	O94907	266 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	PDE8B	O95263	885 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	C8A	P07357	584 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	SLC5A1	P13866	664 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	KCNQ1	P51787	676 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	FCGRT	P55899	365 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	TIMM10	P62072	90 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	TFF2	Q03403	129 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	TFCP2	Q12800	502 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	VGLL4	Q14135	290 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	UBE4A	Q14139	1066 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	PDE3A	Q14432	1141 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	UVSSA	Q2YD98	709 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	DACT2	Q5SW24	774 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	C20orf194	Q5TEA3	1177 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	UCN2	Q96RP3	112 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	COA1	Q9GZY4	146 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	CHMP4B	Q9H444	224 aa	Known RBP	5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	CD209	Q9NNX6	404 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	DDX19B	Q9UMR2	479 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	SUPT16H	Q9Y5B9	1047 aa	Known RBP	5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	CDK5RAP2	Q96SN8	1893 aa		5.71	□□□□□ -1.5
ATXN3-231	ENST00000554994	CACNA1B	Q00975	2339 aa		5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	PNMA6E	A0A0J9YXQ4	647 aa		5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	CETP	P11597	493 aa		5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	IL15	P40933	162 aa	Predicted RBP	5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	RFX5	P48382	616 aa	Predicted RBP	5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	IRX6	P78412	446 aa	Predicted RBP	5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	MVP	Q14764	893 aa	Known RBP	5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	ATP2B3	Q16720	1220 aa		5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	DUOXA2	Q1HG44	320 aa		5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	RABL6	Q3YEC7	729 aa	Predicted RBP	5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	SUPT20HL1	Q3ZLR7	823 aa		5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	BEND4	Q6ZU67	534 aa		5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	POM121	Q96HA1	1249 aa		5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	FAM46A	Q96IP4	442 aa	Known RBP	5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	ZBED3	Q96IU2	234 aa	Predicted RBP	5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	FAM84B	Q96KN1	310 aa	Predicted RBP	5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	MYRFL	Q96LU7	910 aa		5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	UIMC1	Q96RL1	719 aa		5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	ZMYND15	Q9H091	742 aa		5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	MUC3B	Q9H195	1237 aa		5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	GNL3L	Q9NVN8	582 aa	Known RBP	5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	AKAP2	Q9Y2D5	859 aa		5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	MYH7	P12883	1935 aa		5.7	□□□□□ -1.5
ATXN3-231	ENST00000554994	MED23	Q9ULK4	1368 aa		5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	PKD1L2	Q7Z442	2459 aa		5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	SMIM22	K7EJ46	135 aa		5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	OPLAH	O14841	1288 aa		5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	HMMR	O75330	724 aa		5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	BMP3	P12645	472 aa		5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	SMAD3	P84022	425 aa	Known RBP	5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	PUM3	Q15397	648 aa	Known RBP	5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	DLGAP5	Q15398	846 aa		5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	STRIP1	Q5VSL9	837 aa		5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	KIAA1211	Q6ZU35	1233 aa		5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	ATG9A	Q7Z3C6	839 aa		5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	CLEC10A	Q8IUN9	316 aa		5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	FAM20C	Q8IXL6	584 aa		5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	LPIN2	Q92539	896 aa		5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	VTI1A	Q96AJ9	217 aa		5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	MFSD14A	Q96MC6	490 aa		5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	CCDC8	Q9H0W5	538 aa	Predicted RBP	5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	EXOC6B	Q9Y2D4	811 aa		5.69	□□□□□ -1.5
ATXN3-231	ENST00000554994	MYH1	P12882	1939 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	MYH8	P13535	1937 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	UNCX	A6NJT0	531 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	PDHX	O00330	501 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	TNPO2	O14787	897 aa	Known RBP	5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	DDX3Y	O15523	660 aa	Known RBP	5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	CIAO1	O76071	339 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	CYP2C8	P10632	490 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	IGFBP4	P22692	258 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	ADORA1	P30542	326 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	RRP1	P56182	461 aa	Known RBP	5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	ATP11A	P98196	1134 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	SNAPC2	Q13487	334 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	RASA3	Q14644	834 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	C11orf91	Q3C1V1	193 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	MFSD14B	Q5SR56	506 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	TTC39A	Q5SRH9	613 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	CEP135	Q66GS9	1140 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	FBXO33	Q7Z6M2	555 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	UBASH3B	Q8TF42	649 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	FBXL18	Q96ME1	805 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	CRBN	Q96SW2	442 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	FAM83C	Q9BQN1	747 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	PRDM12	Q9H4Q4	367 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	COPRS	Q9NQ92	184 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	ABCF2	Q9UG63	623 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	TTF2	Q9UNY4	1162 aa	Known RBP	5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	PPP2R3B	Q9Y5P8	575 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	CSAD	Q9Y600	493 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994	SNCAIP	Q9Y6H5	919 aa		5.68	□□□□□ -1.5
ATXN3-231	ENST00000554994		A0A1B0GUL7	405 aa		5.67	□□□□□ -1.5

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