RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 L3MBTL1Q9Y468 752 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 NUP98P52948 1817 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 GOLGA6L10A6NI86 522 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 TRIM74Q86UV6 250 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 TRIM73Q86UV7 250 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 ALS2CR12Q96Q35 445 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 TMBIM4Q9HC24 238 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 SLC12A6Q9UHW9 1150 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 RTL9Q8NET4 1388 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 GSTA1P08263 222 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 CDC25CP30307 473 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 CYLC1P35663 651 aaPredicted RBP17.25■□□□□ 0.35
SYNE3-203ENST00000554873 GCLCP48506 637 aaPredicted RBP17.25■□□□□ 0.35
SYNE3-203ENST00000554873 PTGDRQ13258 359 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 LAMB3Q13751 1172 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 NPY5RQ15761 445 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 FKBP15Q5T1M5 1219 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 SUSD4Q5VX71 490 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 TNFRSF25Q93038 417 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 IQSEC3Q9UPP2 1182 aaPredicted RBP17.25■□□□□ 0.35
SYNE3-203ENST00000554873 XDHP47989 1333 aa17.24■□□□□ 0.35
SYNE3-203ENST00000554873 MKRN4PQ13434 485 aaPredicted RBP17.24■□□□□ 0.35
SYNE3-203ENST00000554873 EZH1Q92800 747 aaPredicted RBP17.24■□□□□ 0.35
SYNE3-203ENST00000554873 ZSCAN10Q96SZ4 725 aaPredicted RBP17.24■□□□□ 0.35
SYNE3-203ENST00000554873 NDST4Q9H3R1 872 aa17.24■□□□□ 0.35
SYNE3-203ENST00000554873 GDF3Q9NR23 364 aa17.24■□□□□ 0.35
SYNE3-203ENST00000554873 CHCHD3Q9NX63 227 aaKnown RBP17.24■□□□□ 0.35
SYNE3-203ENST00000554873 ANAPC4Q9UJX5 808 aa17.24■□□□□ 0.35
SYNE3-203ENST00000554873 LUC7L2Q9Y383 392 aaKnown RBP17.24■□□□□ 0.35
SYNE3-203ENST00000554873 BCORQ6W2J9 1755 aa17.24■□□□□ 0.35
SYNE3-203ENST00000554873 ARAP2Q8WZ64 1704 aa17.24■□□□□ 0.35
SYNE3-203ENST00000554873 TTC26A0AVF1 554 aa17.24■□□□□ 0.35
SYNE3-203ENST00000554873 RCCD1A6NED2 376 aa17.24■□□□□ 0.35
SYNE3-203ENST00000554873 BMP15O95972 392 aa17.24■□□□□ 0.35
SYNE3-203ENST00000554873 FAM153BP0C7A2 387 aa17.24■□□□□ 0.35
SYNE3-203ENST00000554873 CDC37Q16543 378 aaPredicted RBP17.24■□□□□ 0.35
SYNE3-203ENST00000554873 FAM153CQ494X1 144 aa17.24■□□□□ 0.35
SYNE3-203ENST00000554873 TTC38Q5R3I4 469 aa17.24■□□□□ 0.35
SYNE3-203ENST00000554873 RRAGBQ5VZM2 374 aa17.24■□□□□ 0.35
SYNE3-203ENST00000554873 TSC22D3Q99576 134 aa17.24■□□□□ 0.35
SYNE3-203ENST00000554873 MTRQ99707 1265 aa17.24■□□□□ 0.35
SYNE3-203ENST00000554873 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.24■□□□□ 0.35
SYNE3-203ENST00000554873 ZFATQ9P243 1243 aa17.24■□□□□ 0.35
SYNE3-203ENST00000554873 FAM153AQ9UHL3 310 aa17.24■□□□□ 0.35
SYNE3-203ENST00000554873 CFAP73A6NFT4 308 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 DIAPH2O60879 1101 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 CLTAP09496 248 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 ZNF513Q8N8E2 541 aaPredicted RBP17.23■□□□□ 0.35
SYNE3-203ENST00000554873 AGAP11Q8TF27 550 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 TAB2Q9NYJ8 693 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 RGL1Q9NZL6 768 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 NFU1Q9UMS0 254 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 ANKRD36CQ5JPF3 1778 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 LRP5O75197 1615 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 CYP2D7A0A087X1C5 515 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 CCT8L1PA6NM43 557 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 PYGLP06737 847 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 PAEPP09466 180 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 TCP1P17987 556 aaKnown RBP17.23■□□□□ 0.35
SYNE3-203ENST00000554873 ARMC3Q5W041 872 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 WDR59Q6PJI9 974 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 MAATS1Q7Z4T9 603 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 CATIPQ7Z7H3 387 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 PNMA8AQ86V59 439 aaPredicted RBP17.23■□□□□ 0.35
SYNE3-203ENST00000554873 PSMD1Q99460 953 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 TSGA10Q9BZW7 698 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 SLIT2O94813 1529 aa17.23■□□□□ 0.35
SYNE3-203ENST00000554873 MYH2Q9UKX2 1941 aa17.22■□□□□ 0.35
SYNE3-203ENST00000554873 BAZ2BQ9UIF8 2168 aaKnown RBP17.22■□□□□ 0.35
SYNE3-203ENST00000554873 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.22■□□□□ 0.35
SYNE3-203ENST00000554873 MACROD2A1Z1Q3 448 aa17.22■□□□□ 0.35
SYNE3-203ENST00000554873 TRIM37O94972 964 aa17.22■□□□□ 0.35
SYNE3-203ENST00000554873 CARSP49589 748 aaKnown RBP17.22■□□□□ 0.35
SYNE3-203ENST00000554873 ATP2C1P98194 919 aaPredicted RBP17.22■□□□□ 0.35
SYNE3-203ENST00000554873 TROAPQ12815 778 aa17.22■□□□□ 0.35
SYNE3-203ENST00000554873 PDIA5Q14554 519 aa17.22■□□□□ 0.35
SYNE3-203ENST00000554873 IFIT1BQ5T764 474 aaKnown RBP17.22■□□□□ 0.35
SYNE3-203ENST00000554873 CCDC170Q8IYT3 715 aa17.22■□□□□ 0.35
SYNE3-203ENST00000554873 ABCF2Q9UG63 623 aa17.22■□□□□ 0.35
SYNE3-203ENST00000554873 MAGEB6P1A0A0J9YX57 407 aa17.22■□□□□ 0.35
SYNE3-203ENST00000554873 ALADP13716 330 aa17.22■□□□□ 0.35
SYNE3-203ENST00000554873 ATP4AP20648 1035 aa17.22■□□□□ 0.35
SYNE3-203ENST00000554873 PAFAH1B1P43034 410 aa17.22■□□□□ 0.35
SYNE3-203ENST00000554873 KIF5AQ12840 1032 aa17.22■□□□□ 0.35
SYNE3-203ENST00000554873 ZNF268Q14587 947 aaPredicted RBP17.22■□□□□ 0.35
SYNE3-203ENST00000554873 TAF1DQ9H5J8 278 aaPredicted RBP17.22■□□□□ 0.35
SYNE3-203ENST00000554873 SLC12A4Q9UP95 1085 aa17.22■□□□□ 0.35
SYNE3-203ENST00000554873 SOS2Q07890 1332 aaPredicted RBP17.22■□□□□ 0.35
SYNE3-203ENST00000554873 SPDYE3A6NKU9 549 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 B4DLN1 442 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 GNAT1P11488 350 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 IL6STP40189 918 aaPredicted RBP17.21■□□□□ 0.35
SYNE3-203ENST00000554873 UBXN1Q04323 297 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 IL17AQ16552 155 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 PDXDC2PQ6P474 469 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 LRIG3Q6UXM1 1119 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 CPLX4Q7Z7G2 160 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 WHAMMQ8TF30 809 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 ZFAND2BQ8WV99 257 aa17.21■□□□□ 0.35
SYNE3-203ENST00000554873 RWDD2AQ9UIY3 292 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms