RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 TRIM31Q9BZY9 425 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 HOMER3Q9NSC5 361 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 INTS13Q9NVM9 706 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 MYO5BQ9ULV0 1848 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 SIGLEC1Q9BZZ2 1709 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 SPOPO43791 374 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 SRGAP2O75044 1071 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 SERPING1P05155 500 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 BTDP43251 543 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 ERFEQ4G0M1 354 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 TRMT1LQ7Z2T5 733 aaKnown RBP4.28□□□□□ -1.72
KTN1-217ENST00000554831 SLFN12Q8IYM2 578 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 CACNA2D3Q8IZS8 1091 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 PIGSQ96S52 555 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 MMS19Q96T76 1030 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 ZNF446Q9NWS9 450 aa4.28□□□□□ -1.72
KTN1-217ENST00000554831 CYP2D6P10635 497 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 CD44P16070 742 aaKnown RBP4.27□□□□□ -1.73
KTN1-217ENST00000554831 HSPA6P17066 643 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 CDK8P49336 464 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 GRM4Q14833 912 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 LRRC41Q15345 812 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 TMEM132AQ24JP5 1023 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 TTI2Q6NXR4 508 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 FBXO33Q7Z6M2 555 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 TADA2BQ86TJ2 420 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 FAM178BQ8IXR5 827 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 OGFOD1Q8N543 542 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 UBL4BQ8N7F7 174 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 VTI1AQ96AJ9 217 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 IWS1Q96ST2 819 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 PPANQ9NQ55 473 aaKnown RBP4.27□□□□□ -1.73
KTN1-217ENST00000554831 CTTNBP2NLQ9P2B4 639 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 HDAC6Q9UBN7 1215 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 DMGDHQ9UI17 866 aaKnown RBP4.27□□□□□ -1.73
KTN1-217ENST00000554831 RICTORQ6R327 1708 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 CNTNAP5Q8WYK1 1306 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 ESYT2A0FGR8 921 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 ARHGEF35A5YM69 484 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 E7EVH7 732 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 ATP2A1O14983 1001 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 NMT2O60551 498 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 RPS6KA4O75676 772 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 KIF4AO95239 1232 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 GCNT3O95395 438 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 GAS8O95995 478 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 ATP1A1P05023 1023 aaKnown RBP4.27□□□□□ -1.73
KTN1-217ENST00000554831 PRLRP16471 622 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 FERP16591 822 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 MEX3CQ5U5Q3 659 aaKnown RBP4.27□□□□□ -1.73
KTN1-217ENST00000554831 ANKRD40Q6AI12 368 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 CENPPQ6IPU0 288 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 VGLL2Q8N8G2 317 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 SLC44A5Q8NCS7 719 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 GJA10Q969M2 543 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 TEKT1Q969V4 418 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 PBKQ96KB5 322 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 OSBPL9Q96SU4 736 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 KRT12Q99456 494 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 ZMYND12Q9H0C1 365 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 TMEM60Q9H2L4 133 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 SUGCTQ9HAC7 445 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 DDX25Q9UHL0 483 aaKnown RBP4.27□□□□□ -1.73
KTN1-217ENST00000554831 NARFQ9UHQ1 456 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 MEGF6O75095 1541 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 PAPD7Q5XG87 772 aaKnown RBP4.27□□□□□ -1.73
KTN1-217ENST00000554831 LRRC47Q8N1G4 583 aaKnown RBP4.27□□□□□ -1.73
KTN1-217ENST00000554831 COA7Q96BR5 231 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 RUNDC3BQ96NL0 473 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 C7orf25Q9BPX7 421 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 KANSL2Q9H9L4 492 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 CAPN7Q9Y6W3 813 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 FAM169AQ9Y6X4 670 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 ABCB11O95342 1321 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 A0A1B0GUA9 196 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 TCRBV5S4A2TA0A5A2 114 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 VGLL3A8MV65 326 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 HMGB1P1B2RPK0 211 aaPredicted RBP4.27□□□□□ -1.73
KTN1-217ENST00000554831 ANKRD65E5RJM6 399 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 MAP2K7O14733 419 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 TTLL1O95922 423 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 VIMP08670 466 aaKnown RBP4.27□□□□□ -1.73
KTN1-217ENST00000554831 NR1D1P20393 614 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 SMARCA1P28370 1054 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 GBP1P32455 592 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 IRAK1P51617 712 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 ERVK-24P63145 666 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 MDM2Q00987 491 aaPredicted RBP4.27□□□□□ -1.73
KTN1-217ENST00000554831 PABPC4Q13310 644 aaKnown RBP eCLIP4.27□□□□□ -1.73
KTN1-217ENST00000554831 NNTQ13423 1086 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 PKN1Q16512 942 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 ICE2Q659A1 982 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 CCDC25Q86WR0 208 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 STAG2Q8N3U4 1231 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 CPVLQ9H3G5 476 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 DAAM1Q9Y4D1 1078 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 RGS16O15492 202 aaPredicted RBP4.27□□□□□ -1.73
KTN1-217ENST00000554831 MOCS3O95396 460 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 ITIH3Q06033 890 aa4.27□□□□□ -1.73
KTN1-217ENST00000554831 SEL1L2Q5TEA6 688 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms