RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 KAT2BQ92831 832 aa16.33■□□□□ 0.2
NEDD1-206ENST00000554226 DCTPP1Q9H773 170 aa16.33■□□□□ 0.2
NEDD1-206ENST00000554226 GTF2IRD1Q9UHL9 959 aa16.33■□□□□ 0.2
NEDD1-206ENST00000554226 POTEB3A0JP26 581 aa16.32■□□□□ 0.2
NEDD1-206ENST00000554226 DCXO43602 365 aa16.32■□□□□ 0.2
NEDD1-206ENST00000554226 MMP3P08254 477 aa16.32■□□□□ 0.2
NEDD1-206ENST00000554226 TOP1P11387 765 aaKnown RBP16.32■□□□□ 0.2
NEDD1-206ENST00000554226 CKBP12277 381 aa16.32■□□□□ 0.2
NEDD1-206ENST00000554226 CALML3P27482 149 aa16.32■□□□□ 0.2
NEDD1-206ENST00000554226 TSHZ3Q63HK5 1081 aa16.32■□□□□ 0.2
NEDD1-206ENST00000554226 TRAF7Q6Q0C0 670 aa16.32■□□□□ 0.2
NEDD1-206ENST00000554226 POTEBQ6S5H4 581 aa16.32■□□□□ 0.2
NEDD1-206ENST00000554226 SP7Q8TDD2 431 aaPredicted RBP16.32■□□□□ 0.2
NEDD1-206ENST00000554226 EMID1Q96A84 441 aaPredicted RBP16.32■□□□□ 0.2
NEDD1-206ENST00000554226 CHMP4CQ96CF2 233 aa16.32■□□□□ 0.2
NEDD1-206ENST00000554226 TCP11L1Q9NUJ3 509 aa16.32■□□□□ 0.2
NEDD1-206ENST00000554226 RALGAPA2Q2PPJ7 1873 aa16.31■□□□□ 0.2
NEDD1-206ENST00000554226 SNHG28P0DPA3 235 aa16.31■□□□□ 0.2
NEDD1-206ENST00000554226 PDHBP11177 359 aa16.31■□□□□ 0.2
NEDD1-206ENST00000554226 HTRA4P83105 476 aaPredicted RBP16.31■□□□□ 0.2
NEDD1-206ENST00000554226 ARHGAP1Q07960 439 aa16.31■□□□□ 0.2
NEDD1-206ENST00000554226 IKBKEQ14164 716 aa16.31■□□□□ 0.2
NEDD1-206ENST00000554226 TCTN1Q2MV58 587 aa16.31■□□□□ 0.2
NEDD1-206ENST00000554226 TRIM71Q2Q1W2 868 aaKnown RBP16.31■□□□□ 0.2
NEDD1-206ENST00000554226 PI4K2BQ8TCG2 481 aa16.31■□□□□ 0.2
NEDD1-206ENST00000554226 AFG1LQ8WV93 481 aa16.31■□□□□ 0.2
NEDD1-206ENST00000554226 TMEM47Q9BQJ4 181 aa16.31■□□□□ 0.2
NEDD1-206ENST00000554226 INSL6Q9Y581 213 aa16.31■□□□□ 0.2
NEDD1-206ENST00000554226 RANBP6O60518 1105 aaKnown RBP16.3■□□□□ 0.2
NEDD1-206ENST00000554226 GH1P01241 217 aa16.3■□□□□ 0.2
NEDD1-206ENST00000554226 CASTP20810 708 aaKnown RBP16.3■□□□□ 0.2
NEDD1-206ENST00000554226 CTDSPL2Q05D32 466 aa16.3■□□□□ 0.2
NEDD1-206ENST00000554226 PTK7Q13308 1070 aa16.3■□□□□ 0.2
NEDD1-206ENST00000554226 ALX1Q15699 326 aa16.3■□□□□ 0.2
NEDD1-206ENST00000554226 MRPL38Q96DV4 380 aaKnown RBP16.3■□□□□ 0.2
NEDD1-206ENST00000554226 INCENPQ9NQS7 918 aa16.3■□□□□ 0.2
NEDD1-206ENST00000554226 PRKAG3Q9UGI9 489 aa16.3■□□□□ 0.2
NEDD1-206ENST00000554226 CTNNA3Q9UI47 895 aa16.3■□□□□ 0.2
NEDD1-206ENST00000554226 NLRC5Q86WI3 1866 aa16.3■□□□□ 0.2
NEDD1-206ENST00000554226 EMSYQ7Z589 1322 aa16.29■□□□□ 0.2
NEDD1-206ENST00000554226 HAS3O00219 553 aa16.29■□□□□ 0.2
NEDD1-206ENST00000554226 F2P00734 622 aa16.29■□□□□ 0.2
NEDD1-206ENST00000554226 HOXD8P13378 290 aaPredicted RBP16.29■□□□□ 0.2
NEDD1-206ENST00000554226 ZNF543Q08ER8 600 aa16.29■□□□□ 0.2
NEDD1-206ENST00000554226 MBTPS1Q14703 1052 aa16.29■□□□□ 0.2
NEDD1-206ENST00000554226 SAMD11Q96NU1 681 aa16.29■□□□□ 0.2
NEDD1-206ENST00000554226 KATNAL1Q9BW62 490 aa16.29■□□□□ 0.2
NEDD1-206ENST00000554226 FRMPD2Q68DX3 1309 aaPredicted RBP16.28■□□□□ 0.2
NEDD1-206ENST00000554226 ATG2AQ2TAZ0 1938 aa16.28■□□□□ 0.2
NEDD1-206ENST00000554226 C19orf67A6NJJ6 358 aa16.28■□□□□ 0.2
NEDD1-206ENST00000554226 ZP2Q05996 745 aa16.28■□□□□ 0.2
NEDD1-206ENST00000554226 DGKDQ16760 1214 aa16.28■□□□□ 0.2
NEDD1-206ENST00000554226 TIGD5Q53EQ6 642 aa16.28■□□□□ 0.2
NEDD1-206ENST00000554226 FBXO22Q8NEZ5 403 aa16.28■□□□□ 0.2
NEDD1-206ENST00000554226 TTC14Q96N46 770 aa16.28■□□□□ 0.2
NEDD1-206ENST00000554226 IWS1Q96ST2 819 aa16.28■□□□□ 0.2
NEDD1-206ENST00000554226 C17orf80Q9BSJ5 609 aa16.28■□□□□ 0.2
NEDD1-206ENST00000554226 FSD1Q9BTV5 496 aa16.28■□□□□ 0.2
NEDD1-206ENST00000554226 MTMR7Q9Y216 660 aa16.28■□□□□ 0.2
NEDD1-206ENST00000554226 MYH7BA7E2Y1 1941 aa16.27■□□□□ 0.2
NEDD1-206ENST00000554226 MYH6P13533 1939 aa16.27■□□□□ 0.2
NEDD1-206ENST00000554226 ZMYM6O95789 1325 aa16.27■□□□□ 0.2
NEDD1-206ENST00000554226 H3BQ06 376 aaPredicted RBP16.27■□□□□ 0.2
NEDD1-206ENST00000554226 LGR5O75473 907 aa16.27■□□□□ 0.2
NEDD1-206ENST00000554226 PTPROQ16827 1216 aa16.27■□□□□ 0.2
NEDD1-206ENST00000554226 HFE2Q6ZVN8 426 aa16.27■□□□□ 0.2
NEDD1-206ENST00000554226 C7orf31Q8N865 590 aa16.27■□□□□ 0.2
NEDD1-206ENST00000554226 NSUN6Q8TEA1 469 aaKnown RBP16.27■□□□□ 0.2
NEDD1-206ENST00000554226 PABPC5Q96DU9 382 aaKnown RBP16.27■□□□□ 0.2
NEDD1-206ENST00000554226 GPCPD1Q9NPB8 672 aa16.27■□□□□ 0.2
NEDD1-206ENST00000554226 HDAC6Q9UBN7 1215 aa16.27■□□□□ 0.2
NEDD1-206ENST00000554226 PSEN2P49810 448 aa16.26■□□□□ 0.19
NEDD1-206ENST00000554226 LY6KQ17RY6 165 aa16.26■□□□□ 0.19
NEDD1-206ENST00000554226 GPATCH4Q5T3I0 446 aaKnown RBP16.26■□□□□ 0.19
NEDD1-206ENST00000554226 ZNF618Q5T7W0 954 aa16.26■□□□□ 0.19
NEDD1-206ENST00000554226 PPTC7Q8NI37 304 aa16.26■□□□□ 0.19
NEDD1-206ENST00000554226 CRBNQ96SW2 442 aa16.26■□□□□ 0.19
NEDD1-206ENST00000554226 DDX41Q9UJV9 622 aaKnown RBP16.26■□□□□ 0.19
NEDD1-206ENST00000554226 FAM50BQ9Y247 325 aa16.26■□□□□ 0.19
NEDD1-206ENST00000554226 C5orf42Q9H799 3197 aa16.26■□□□□ 0.19
NEDD1-206ENST00000554226 H3BNC9 293 aa16.25■□□□□ 0.19
NEDD1-206ENST00000554226 AMHP03971 560 aa16.25■□□□□ 0.19
NEDD1-206ENST00000554226 PCP11498 1178 aaKnown RBP16.25■□□□□ 0.19
NEDD1-206ENST00000554226 CHMP4BP1P59074 171 aa16.25■□□□□ 0.19
NEDD1-206ENST00000554226 MFSD10Q14728 455 aa16.25■□□□□ 0.19
NEDD1-206ENST00000554226 STXBP2Q15833 593 aa16.25■□□□□ 0.19
NEDD1-206ENST00000554226 EPC2Q52LR7 807 aa16.25■□□□□ 0.19
NEDD1-206ENST00000554226 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
NEDD1-206ENST00000554226 FAM117BQ6P1L5 589 aa16.25■□□□□ 0.19
NEDD1-206ENST00000554226 SERINC5Q86VE9 423 aa16.25■□□□□ 0.19
NEDD1-206ENST00000554226 TICAM2Q86XR7 235 aa16.25■□□□□ 0.19
NEDD1-206ENST00000554226 SYTL5Q8TDW5 730 aaPredicted RBP16.25■□□□□ 0.19
NEDD1-206ENST00000554226 ANKS1AQ92625 1134 aa16.25■□□□□ 0.19
NEDD1-206ENST00000554226 WNT8BQ93098 351 aa16.25■□□□□ 0.19
NEDD1-206ENST00000554226 ABCB11O95342 1321 aa16.24■□□□□ 0.19
NEDD1-206ENST00000554226 HOXC8P31273 242 aa16.24■□□□□ 0.19
NEDD1-206ENST00000554226 GHRHRQ02643 423 aa16.24■□□□□ 0.19
NEDD1-206ENST00000554226 LAMC2Q13753 1193 aa16.24■□□□□ 0.19
NEDD1-206ENST00000554226 KIAA0753Q2KHM9 967 aa16.24■□□□□ 0.19
NEDD1-206ENST00000554226 PLEKHG4Q58EX7 1191 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms